data_2PE0 # _model_server_result.job_id DrK1zOlBtsQ7xsWjg41a4A _model_server_result.datetime_utc '2025-01-10 21:03:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2pe0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":603}' # _entry.id 2PE0 # _exptl.entry_id 2PE0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2PE0 _cell.length_a 123.951 _cell.length_b 123.951 _cell.length_c 47.217 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PE0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id C _struct_conn.ptnr1_label_comp_id SEP _struct_conn.ptnr1_label_seq_id 168 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SEP _struct_conn.ptnr1_auth_seq_id 241 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id PHE _struct_conn.ptnr2_label_seq_id 169 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id PHE _struct_conn.ptnr2_auth_seq_id 242 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.331 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 161 n n C1 C2 GOL sing 162 n n C1 H11 GOL sing 163 n n C1 H12 GOL sing 164 n n O1 HO1 GOL sing 165 n n C2 O2 GOL sing 166 n n C2 C3 GOL sing 167 n n C2 H2 GOL sing 168 n n O2 HO2 GOL sing 169 n n C3 O3 GOL sing 170 n n C3 H31 GOL sing 171 n n C3 H32 GOL sing 172 n n O3 HO3 GOL sing 173 n n # _atom_sites.entry_id 2PE0 _atom_sites.fract_transf_matrix[1][1] 0.008068 _atom_sites.fract_transf_matrix[1][2] 0.004658 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009316 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021179 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 600 600 SO4 SO4 . C 2 SO4 A 1 601 601 SO4 SO4 . D 3 39Z A 1 501 501 39Z 39Z . E 4 GOL A 1 602 602 GOL GOL . F 4 GOL A 1 603 603 GOL GOL . G 4 GOL A 1 604 604 GOL GOL . H 5 HOH A 1 701 701 HOH HOH . H 5 HOH A 2 702 702 HOH HOH . H 5 HOH A 3 703 703 HOH HOH . H 5 HOH A 4 704 704 HOH HOH . H 5 HOH A 5 705 705 HOH HOH . H 5 HOH A 6 707 707 HOH HOH . H 5 HOH A 7 710 710 HOH HOH . H 5 HOH A 8 711 711 HOH HOH . H 5 HOH A 9 712 712 HOH HOH . H 5 HOH A 10 715 715 HOH HOH . H 5 HOH A 11 719 719 HOH HOH . H 5 HOH A 12 723 723 HOH HOH . H 5 HOH A 13 725 725 HOH HOH . H 5 HOH A 14 727 727 HOH HOH . H 5 HOH A 15 733 733 HOH HOH . H 5 HOH A 16 740 740 HOH HOH . H 5 HOH A 17 746 746 HOH HOH . H 5 HOH A 18 750 750 HOH HOH . H 5 HOH A 19 762 762 HOH HOH . H 5 HOH A 20 763 763 HOH HOH . H 5 HOH A 21 769 769 HOH HOH . H 5 HOH A 22 770 770 HOH HOH . H 5 HOH A 23 771 771 HOH HOH . H 5 HOH A 24 772 772 HOH HOH . H 5 HOH A 25 773 773 HOH HOH . H 5 HOH A 26 774 774 HOH HOH . H 5 HOH A 27 775 775 HOH HOH . H 5 HOH A 28 776 776 HOH HOH . H 5 HOH A 29 778 778 HOH HOH . H 5 HOH A 30 780 780 HOH HOH . H 5 HOH A 31 782 782 HOH HOH . H 5 HOH A 32 783 783 HOH HOH . H 5 HOH A 33 791 791 HOH HOH . H 5 HOH A 34 792 792 HOH HOH . H 5 HOH A 35 793 793 HOH HOH . H 5 HOH A 36 796 796 HOH HOH . H 5 HOH A 37 797 797 HOH HOH . H 5 HOH A 38 800 800 HOH HOH . H 5 HOH A 39 801 801 HOH HOH . H 5 HOH A 40 802 802 HOH HOH . H 5 HOH A 41 803 803 HOH HOH . H 5 HOH A 42 805 805 HOH HOH . H 5 HOH A 43 806 806 HOH HOH . H 5 HOH A 44 807 807 HOH HOH . H 5 HOH A 45 808 808 HOH HOH . H 5 HOH A 46 809 809 HOH HOH . H 5 HOH A 47 810 810 HOH HOH . H 5 HOH A 48 811 811 HOH HOH . H 5 HOH A 49 812 812 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 4 -13.327 41.285 62.213 1 61.4 ? C1 GOL 603 A 1 HETATM 2 O O1 GOL . . . F 4 -11.931 41.134 62.459 1 63.25 ? O1 GOL 603 A 1 HETATM 3 C C2 GOL . . . F 4 -13.597 42.692 61.696 1 60.45 ? C2 GOL 603 A 1 HETATM 4 O O2 GOL . . . F 4 -12.852 42.908 60.5 1 59.37 ? O2 GOL 603 A 1 HETATM 5 C C3 GOL . . . F 4 -15.092 42.855 61.423 1 63.15 ? C3 GOL 603 A 1 HETATM 6 O O3 GOL . . . F 4 -15.362 44.171 60.932 1 65.49 ? O3 GOL 603 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #