data_2PHD
#
_model_server_result.job_id            -I8vMUu7SlOgVB2hNZ_BwA 
_model_server_result.datetime_utc      '2024-11-02 13:29:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2phd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":370}' 
#
_entry.id    2PHD 
#
_exptl.entry_id    2PHD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              55.845 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FE (III) ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2PHD 
_cell.length_a            133.016 
_cell.length_b            133.016 
_cell.length_c            190.748 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2PHD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 H N N 
? 2 J N N 
? 2 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 119 A HIS 119 1_555 E FE FE . A FE 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? 
metalc ? metalc2 A NE2 HIS 121 A HIS 121 1_555 E FE FE . A FE 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? 
metalc ? metalc3 A NE2 HIS 160 A HIS 160 1_555 E FE FE . A FE 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc4 B NE2 HIS 119 B HIS 119 1_555 H FE FE . B FE 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.796 ? 
metalc ? metalc5 B NE2 HIS 121 B HIS 121 1_555 H FE FE . B FE 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc6 B NE2 HIS 160 B HIS 160 1_555 H FE FE . B FE 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? 
metalc ? metalc7 H FE FE . B FE 370 1_555 P O HOH . B HOH 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
metalc ? metalc8 H FE FE . B FE 370 1_555 N O ACT . D ACT 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? 
metalc ? metalc9 C NE2 HIS 119 C HIS 119 1_555 J FE FE . C FE 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? 
metalc ? metalc10 C NE2 HIS 121 C HIS 121 1_555 J FE FE . C FE 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? 
metalc ? metalc11 C NE2 HIS 160 C HIS 160 1_555 J FE FE . C FE 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? 
metalc ? metalc12 J FE FE . C FE 370 1_555 Q O HOH . C HOH 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? 
metalc ? metalc13 D NE2 HIS 119 D HIS 119 1_555 L FE FE . D FE 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
metalc ? metalc14 D NE2 HIS 121 D HIS 121 1_555 L FE FE . D FE 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc15 D NE2 HIS 160 D HIS 160 1_555 L FE FE . D FE 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc16 L FE FE . D FE 370 1_555 R O HOH . D HOH 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? 
#
_chem_comp.formula           'Fe 3' 
_chem_comp.formula_weight    55.845 
_chem_comp.id                FE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FE (III) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2PHD 
_atom_sites.fract_transf_matrix[1][1]    0.007518 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007518 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005243 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FE A 1 370 370 FE FE . 
F 3 CL A 1 1 1 CL CL . 
G 4 ACT A 1 371 1 ACT ACT . 
H 2 FE B 1 370 370 FE FE . 
I 3 CL B 1 2 2 CL CL . 
J 2 FE C 1 370 370 FE FE . 
K 3 CL C 1 4 4 CL CL . 
L 2 FE D 1 370 370 FE FE . 
M 3 CL D 1 3 3 CL CL . 
N 4 ACT D 1 1 1 ACT ACT . 
O 5 HOH A 1 372 11 HOH HOH . 
O 5 HOH A 2 373 14 HOH HOH . 
O 5 HOH A 3 374 15 HOH HOH . 
O 5 HOH A 4 375 23 HOH HOH . 
O 5 HOH A 5 376 31 HOH HOH . 
O 5 HOH A 6 377 33 HOH HOH . 
O 5 HOH A 7 378 34 HOH HOH . 
O 5 HOH A 8 379 38 HOH HOH . 
O 5 HOH A 9 380 60 HOH HOH . 
O 5 HOH A 10 381 61 HOH HOH . 
O 5 HOH A 11 382 62 HOH HOH . 
O 5 HOH A 12 383 63 HOH HOH . 
O 5 HOH A 13 384 72 HOH HOH . 
O 5 HOH A 14 385 73 HOH HOH . 
O 5 HOH A 15 386 83 HOH HOH . 
O 5 HOH A 16 387 84 HOH HOH . 
O 5 HOH A 17 388 89 HOH HOH . 
O 5 HOH A 18 389 125 HOH HOH . 
O 5 HOH A 19 390 129 HOH HOH . 
O 5 HOH A 20 391 137 HOH HOH . 
O 5 HOH A 21 392 139 HOH HOH . 
O 5 HOH A 22 393 140 HOH HOH . 
O 5 HOH A 23 394 142 HOH HOH . 
O 5 HOH A 24 395 143 HOH HOH . 
O 5 HOH A 25 396 144 HOH HOH . 
O 5 HOH A 26 397 145 HOH HOH . 
O 5 HOH A 27 398 147 HOH HOH . 
O 5 HOH A 28 399 155 HOH HOH . 
O 5 HOH A 29 400 156 HOH HOH . 
O 5 HOH A 30 401 158 HOH HOH . 
O 5 HOH A 31 402 159 HOH HOH . 
O 5 HOH A 32 403 161 HOH HOH . 
O 5 HOH A 33 404 167 HOH HOH . 
P 5 HOH B 1 371 3 HOH HOH . 
P 5 HOH B 2 372 8 HOH HOH . 
P 5 HOH B 3 373 10 HOH HOH . 
P 5 HOH B 4 374 13 HOH HOH . 
P 5 HOH B 5 375 16 HOH HOH . 
P 5 HOH B 6 376 17 HOH HOH . 
P 5 HOH B 7 377 21 HOH HOH . 
P 5 HOH B 8 378 26 HOH HOH . 
P 5 HOH B 9 379 30 HOH HOH . 
P 5 HOH B 10 380 36 HOH HOH . 
P 5 HOH B 11 381 37 HOH HOH . 
P 5 HOH B 12 382 41 HOH HOH . 
P 5 HOH B 13 383 42 HOH HOH . 
P 5 HOH B 14 384 43 HOH HOH . 
P 5 HOH B 15 385 44 HOH HOH . 
P 5 HOH B 16 386 45 HOH HOH . 
P 5 HOH B 17 387 47 HOH HOH . 
P 5 HOH B 18 388 48 HOH HOH . 
P 5 HOH B 19 389 49 HOH HOH . 
P 5 HOH B 20 390 59 HOH HOH . 
P 5 HOH B 21 391 70 HOH HOH . 
P 5 HOH B 22 392 74 HOH HOH . 
P 5 HOH B 23 393 76 HOH HOH . 
P 5 HOH B 24 394 78 HOH HOH . 
P 5 HOH B 25 395 79 HOH HOH . 
P 5 HOH B 26 396 81 HOH HOH . 
P 5 HOH B 27 397 91 HOH HOH . 
P 5 HOH B 28 398 92 HOH HOH . 
P 5 HOH B 29 399 93 HOH HOH . 
P 5 HOH B 30 400 95 HOH HOH . 
P 5 HOH B 31 401 96 HOH HOH . 
P 5 HOH B 32 402 97 HOH HOH . 
P 5 HOH B 33 403 98 HOH HOH . 
P 5 HOH B 34 404 105 HOH HOH . 
P 5 HOH B 35 405 108 HOH HOH . 
P 5 HOH B 36 406 109 HOH HOH . 
P 5 HOH B 37 407 127 HOH HOH . 
P 5 HOH B 38 408 130 HOH HOH . 
P 5 HOH B 39 409 133 HOH HOH . 
P 5 HOH B 40 410 134 HOH HOH . 
P 5 HOH B 41 411 138 HOH HOH . 
P 5 HOH B 42 412 148 HOH HOH . 
P 5 HOH B 43 413 149 HOH HOH . 
P 5 HOH B 44 414 150 HOH HOH . 
P 5 HOH B 45 415 151 HOH HOH . 
P 5 HOH B 46 416 163 HOH HOH . 
P 5 HOH B 47 417 165 HOH HOH . 
P 5 HOH B 48 418 166 HOH HOH . 
P 5 HOH B 49 419 175 HOH HOH . 
Q 5 HOH C 1 371 1 HOH HOH . 
Q 5 HOH C 2 372 2 HOH HOH . 
Q 5 HOH C 3 373 4 HOH HOH . 
Q 5 HOH C 4 374 6 HOH HOH . 
Q 5 HOH C 5 375 7 HOH HOH . 
Q 5 HOH C 6 376 9 HOH HOH . 
Q 5 HOH C 7 377 19 HOH HOH . 
Q 5 HOH C 8 378 20 HOH HOH . 
Q 5 HOH C 9 379 22 HOH HOH . 
Q 5 HOH C 10 380 24 HOH HOH . 
Q 5 HOH C 11 381 25 HOH HOH . 
Q 5 HOH C 12 382 27 HOH HOH . 
Q 5 HOH C 13 383 29 HOH HOH . 
Q 5 HOH C 14 384 32 HOH HOH . 
Q 5 HOH C 15 385 35 HOH HOH . 
Q 5 HOH C 16 386 40 HOH HOH . 
Q 5 HOH C 17 387 50 HOH HOH . 
Q 5 HOH C 18 388 51 HOH HOH . 
Q 5 HOH C 19 389 53 HOH HOH . 
Q 5 HOH C 20 390 54 HOH HOH . 
Q 5 HOH C 21 391 56 HOH HOH . 
Q 5 HOH C 22 392 57 HOH HOH . 
Q 5 HOH C 23 393 58 HOH HOH . 
Q 5 HOH C 24 394 64 HOH HOH . 
Q 5 HOH C 25 395 65 HOH HOH . 
Q 5 HOH C 26 396 66 HOH HOH . 
Q 5 HOH C 27 397 68 HOH HOH . 
Q 5 HOH C 28 398 69 HOH HOH . 
Q 5 HOH C 29 399 71 HOH HOH . 
Q 5 HOH C 30 400 75 HOH HOH . 
Q 5 HOH C 31 401 90 HOH HOH . 
Q 5 HOH C 32 402 94 HOH HOH . 
Q 5 HOH C 33 403 99 HOH HOH . 
Q 5 HOH C 34 404 100 HOH HOH . 
Q 5 HOH C 35 405 101 HOH HOH . 
Q 5 HOH C 36 406 102 HOH HOH . 
Q 5 HOH C 37 407 103 HOH HOH . 
Q 5 HOH C 38 408 104 HOH HOH . 
Q 5 HOH C 39 409 106 HOH HOH . 
Q 5 HOH C 40 410 107 HOH HOH . 
Q 5 HOH C 41 411 110 HOH HOH . 
Q 5 HOH C 42 412 111 HOH HOH . 
Q 5 HOH C 43 413 112 HOH HOH . 
Q 5 HOH C 44 414 113 HOH HOH . 
Q 5 HOH C 45 415 114 HOH HOH . 
Q 5 HOH C 46 416 115 HOH HOH . 
Q 5 HOH C 47 417 116 HOH HOH . 
Q 5 HOH C 48 418 117 HOH HOH . 
Q 5 HOH C 49 419 118 HOH HOH . 
Q 5 HOH C 50 420 128 HOH HOH . 
Q 5 HOH C 51 421 132 HOH HOH . 
Q 5 HOH C 52 422 152 HOH HOH . 
Q 5 HOH C 53 423 154 HOH HOH . 
Q 5 HOH C 54 424 157 HOH HOH . 
Q 5 HOH C 55 425 160 HOH HOH . 
Q 5 HOH C 56 426 162 HOH HOH . 
Q 5 HOH C 57 427 164 HOH HOH . 
Q 5 HOH C 58 428 168 HOH HOH . 
Q 5 HOH C 59 429 169 HOH HOH . 
Q 5 HOH C 60 430 171 HOH HOH . 
Q 5 HOH C 61 431 172 HOH HOH . 
Q 5 HOH C 62 432 173 HOH HOH . 
R 5 HOH D 1 371 5 HOH HOH . 
R 5 HOH D 2 372 12 HOH HOH . 
R 5 HOH D 3 373 18 HOH HOH . 
R 5 HOH D 4 374 28 HOH HOH . 
R 5 HOH D 5 375 39 HOH HOH . 
R 5 HOH D 6 376 46 HOH HOH . 
R 5 HOH D 7 377 52 HOH HOH . 
R 5 HOH D 8 378 55 HOH HOH . 
R 5 HOH D 9 379 67 HOH HOH . 
R 5 HOH D 10 380 77 HOH HOH . 
R 5 HOH D 11 381 80 HOH HOH . 
R 5 HOH D 12 382 82 HOH HOH . 
R 5 HOH D 13 383 85 HOH HOH . 
R 5 HOH D 14 384 86 HOH HOH . 
R 5 HOH D 15 385 87 HOH HOH . 
R 5 HOH D 16 386 88 HOH HOH . 
R 5 HOH D 17 387 119 HOH HOH . 
R 5 HOH D 18 388 120 HOH HOH . 
R 5 HOH D 19 389 121 HOH HOH . 
R 5 HOH D 20 390 122 HOH HOH . 
R 5 HOH D 21 391 123 HOH HOH . 
R 5 HOH D 22 392 124 HOH HOH . 
R 5 HOH D 23 393 126 HOH HOH . 
R 5 HOH D 24 394 131 HOH HOH . 
R 5 HOH D 25 395 135 HOH HOH . 
R 5 HOH D 26 396 141 HOH HOH . 
R 5 HOH D 27 397 146 HOH HOH . 
R 5 HOH D 28 398 153 HOH HOH . 
R 5 HOH D 29 399 170 HOH HOH . 
R 5 HOH D 30 400 174 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           FE 
_atom_site.label_atom_id         FE 
_atom_site.label_comp_id         FE 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -20.929 
_atom_site.Cartn_y               30.486 
_atom_site.Cartn_z               27.443 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        35 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          FE 
_atom_site.auth_comp_id          FE 
_atom_site.auth_seq_id           370 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           238 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           1 
#