data_2PIT
#
_model_server_result.job_id            yC9XupzV9Ko2ipneYHoS4w 
_model_server_result.datetime_utc      '2024-11-16 10:48:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2pit 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":933}' 
#
_entry.id    2PIT 
#
_exptl.entry_id    2PIT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              621.932 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2PIT 
_cell.length_a            55.4 
_cell.length_b            66.43 
_cell.length_c            70.61 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2PIT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             1 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              669 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             176 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              844 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.99 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C14 H9 I3 O4' 
_chem_comp.formula_weight    621.932 
_chem_comp.id                4HY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C3 4HY doub 1 n y 
C1 C11 4HY sing 2 n y 
C1 C13 4HY sing 3 n n 
C2 C4 4HY doub 4 n y 
C2 C12 4HY sing 5 n y 
C2 O2 4HY sing 6 n n 
C3 C5 4HY sing 7 n y 
C3 HC31 4HY sing 8 n n 
C4 C6 4HY sing 9 n y 
C4 HC41 4HY sing 10 n n 
C5 C7 4HY doub 11 n y 
C5 I1 4HY sing 12 n n 
C6 C8 4HY doub 13 n y 
C6 I2 4HY sing 14 n n 
C7 C9 4HY sing 15 n y 
C7 O2 4HY sing 16 n n 
C8 C10 4HY sing 17 n y 
C8 O1 4HY sing 18 n n 
C9 C11 4HY doub 19 n y 
C9 I3 4HY sing 20 n n 
C10 C12 4HY doub 21 n y 
C10 H101 4HY sing 22 n n 
C11 H111 4HY sing 23 n n 
C12 H121 4HY sing 24 n n 
C13 C14 4HY sing 25 n n 
C13 H131 4HY sing 26 n n 
C13 H132 4HY sing 27 n n 
C14 O3 4HY doub 28 n n 
C14 O4 4HY sing 29 n n 
O1 HO11 4HY sing 30 n n 
O4 HO41 4HY sing 31 n n 
#
_atom_sites.entry_id                     2PIT 
_atom_sites.fract_transf_matrix[1][1]    0.018051 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015053 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014162 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 932 932 SO4 SO4 . 
C 3 DHT A 1 931 931 DHT DHT . 
D 4 4HY A 1 933 1 4HY TRI . 
E 5 HOH A 1 934 1 HOH TIP . 
E 5 HOH A 2 935 2 HOH TIP . 
E 5 HOH A 3 936 3 HOH TIP . 
E 5 HOH A 4 937 4 HOH TIP . 
E 5 HOH A 5 938 5 HOH TIP . 
E 5 HOH A 6 939 6 HOH TIP . 
E 5 HOH A 7 940 7 HOH TIP . 
E 5 HOH A 8 941 8 HOH TIP . 
E 5 HOH A 9 942 9 HOH TIP . 
E 5 HOH A 10 943 10 HOH TIP . 
E 5 HOH A 11 944 11 HOH TIP . 
E 5 HOH A 12 945 12 HOH TIP . 
E 5 HOH A 13 946 13 HOH TIP . 
E 5 HOH A 14 947 14 HOH TIP . 
E 5 HOH A 15 948 15 HOH TIP . 
E 5 HOH A 16 949 16 HOH TIP . 
E 5 HOH A 17 950 17 HOH TIP . 
E 5 HOH A 18 951 18 HOH TIP . 
E 5 HOH A 19 952 19 HOH TIP . 
E 5 HOH A 20 953 20 HOH TIP . 
E 5 HOH A 21 954 21 HOH TIP . 
E 5 HOH A 22 955 22 HOH TIP . 
E 5 HOH A 23 956 23 HOH TIP . 
E 5 HOH A 24 957 24 HOH TIP . 
E 5 HOH A 25 958 25 HOH TIP . 
E 5 HOH A 26 959 26 HOH TIP . 
E 5 HOH A 27 960 27 HOH TIP . 
E 5 HOH A 28 961 28 HOH TIP . 
E 5 HOH A 29 962 29 HOH TIP . 
E 5 HOH A 30 963 30 HOH TIP . 
E 5 HOH A 31 964 31 HOH TIP . 
E 5 HOH A 32 965 32 HOH TIP . 
E 5 HOH A 33 966 33 HOH TIP . 
E 5 HOH A 34 967 34 HOH TIP . 
E 5 HOH A 35 968 35 HOH TIP . 
E 5 HOH A 36 969 36 HOH TIP . 
E 5 HOH A 37 970 37 HOH TIP . 
E 5 HOH A 38 971 38 HOH TIP . 
E 5 HOH A 39 972 39 HOH TIP . 
E 5 HOH A 40 973 40 HOH TIP . 
E 5 HOH A 41 974 41 HOH TIP . 
E 5 HOH A 42 975 42 HOH TIP . 
E 5 HOH A 43 976 43 HOH TIP . 
E 5 HOH A 44 977 44 HOH TIP . 
E 5 HOH A 45 978 45 HOH TIP . 
E 5 HOH A 46 979 46 HOH TIP . 
E 5 HOH A 47 980 47 HOH TIP . 
E 5 HOH A 48 981 48 HOH TIP . 
E 5 HOH A 49 982 49 HOH TIP . 
E 5 HOH A 50 983 50 HOH TIP . 
E 5 HOH A 51 984 51 HOH TIP . 
E 5 HOH A 52 985 52 HOH TIP . 
E 5 HOH A 53 986 53 HOH TIP . 
E 5 HOH A 54 987 54 HOH TIP . 
E 5 HOH A 55 988 55 HOH TIP . 
E 5 HOH A 56 989 57 HOH TIP . 
E 5 HOH A 57 990 58 HOH TIP . 
E 5 HOH A 58 991 59 HOH TIP . 
E 5 HOH A 59 992 60 HOH TIP . 
E 5 HOH A 60 993 61 HOH TIP . 
E 5 HOH A 61 994 62 HOH TIP . 
E 5 HOH A 62 995 63 HOH TIP . 
E 5 HOH A 63 996 64 HOH TIP . 
E 5 HOH A 64 997 65 HOH TIP . 
E 5 HOH A 65 998 66 HOH TIP . 
E 5 HOH A 66 999 67 HOH TIP . 
E 5 HOH A 67 1000 68 HOH TIP . 
E 5 HOH A 68 1001 69 HOH TIP . 
E 5 HOH A 69 1002 70 HOH TIP . 
E 5 HOH A 70 1003 71 HOH TIP . 
E 5 HOH A 71 1004 72 HOH TIP . 
E 5 HOH A 72 1005 73 HOH TIP . 
E 5 HOH A 73 1006 74 HOH TIP . 
E 5 HOH A 74 1007 75 HOH TIP . 
E 5 HOH A 75 1008 76 HOH TIP . 
E 5 HOH A 76 1009 77 HOH TIP . 
E 5 HOH A 77 1010 78 HOH TIP . 
E 5 HOH A 78 1011 79 HOH TIP . 
E 5 HOH A 79 1012 80 HOH TIP . 
E 5 HOH A 80 1013 81 HOH TIP . 
E 5 HOH A 81 1014 82 HOH TIP . 
E 5 HOH A 82 1015 83 HOH TIP . 
E 5 HOH A 83 1016 85 HOH TIP . 
E 5 HOH A 84 1017 86 HOH TIP . 
E 5 HOH A 85 1018 87 HOH TIP . 
E 5 HOH A 86 1019 88 HOH TIP . 
E 5 HOH A 87 1020 89 HOH TIP . 
E 5 HOH A 88 1021 90 HOH TIP . 
E 5 HOH A 89 1022 91 HOH TIP . 
E 5 HOH A 90 1023 92 HOH TIP . 
E 5 HOH A 91 1024 93 HOH TIP . 
E 5 HOH A 92 1025 94 HOH TIP . 
E 5 HOH A 93 1026 95 HOH TIP . 
E 5 HOH A 94 1027 96 HOH TIP . 
E 5 HOH A 95 1028 97 HOH TIP . 
E 5 HOH A 96 1029 98 HOH TIP . 
E 5 HOH A 97 1030 99 HOH TIP . 
E 5 HOH A 98 1031 100 HOH TIP . 
E 5 HOH A 99 1032 101 HOH TIP . 
E 5 HOH A 100 1033 102 HOH TIP . 
E 5 HOH A 101 1034 103 HOH TIP . 
E 5 HOH A 102 1035 104 HOH TIP . 
E 5 HOH A 103 1036 106 HOH TIP . 
E 5 HOH A 104 1037 107 HOH TIP . 
E 5 HOH A 105 1038 108 HOH TIP . 
E 5 HOH A 106 1039 109 HOH TIP . 
E 5 HOH A 107 1040 110 HOH TIP . 
E 5 HOH A 108 1041 111 HOH TIP . 
E 5 HOH A 109 1042 112 HOH TIP . 
E 5 HOH A 110 1043 113 HOH TIP . 
E 5 HOH A 111 1044 114 HOH TIP . 
E 5 HOH A 112 1045 115 HOH TIP . 
E 5 HOH A 113 1046 116 HOH TIP . 
E 5 HOH A 114 1047 117 HOH TIP . 
E 5 HOH A 115 1048 118 HOH TIP . 
E 5 HOH A 116 1049 119 HOH TIP . 
E 5 HOH A 117 1050 120 HOH TIP . 
E 5 HOH A 118 1051 121 HOH TIP . 
E 5 HOH A 119 1052 122 HOH TIP . 
E 5 HOH A 120 1053 123 HOH TIP . 
E 5 HOH A 121 1054 124 HOH TIP . 
E 5 HOH A 122 1055 125 HOH TIP . 
E 5 HOH A 123 1056 126 HOH TIP . 
E 5 HOH A 124 1057 127 HOH TIP . 
E 5 HOH A 125 1058 128 HOH TIP . 
E 5 HOH A 126 1059 129 HOH TIP . 
E 5 HOH A 127 1060 130 HOH TIP . 
E 5 HOH A 128 1061 131 HOH TIP . 
E 5 HOH A 129 1062 132 HOH TIP . 
E 5 HOH A 130 1063 133 HOH TIP . 
E 5 HOH A 131 1064 134 HOH TIP . 
E 5 HOH A 132 1065 135 HOH TIP . 
E 5 HOH A 133 1066 136 HOH TIP . 
E 5 HOH A 134 1067 137 HOH TIP . 
E 5 HOH A 135 1068 138 HOH TIP . 
E 5 HOH A 136 1069 139 HOH TIP . 
E 5 HOH A 137 1070 140 HOH TIP . 
E 5 HOH A 138 1071 141 HOH TIP . 
E 5 HOH A 139 1072 142 HOH TIP . 
E 5 HOH A 140 1073 143 HOH TIP . 
E 5 HOH A 141 1074 144 HOH TIP . 
E 5 HOH A 142 1075 145 HOH TIP . 
E 5 HOH A 143 1076 146 HOH TIP . 
E 5 HOH A 144 1077 147 HOH TIP . 
E 5 HOH A 145 1078 148 HOH TIP . 
E 5 HOH A 146 1079 149 HOH TIP . 
E 5 HOH A 147 1080 150 HOH TIP . 
E 5 HOH A 148 1081 151 HOH TIP . 
E 5 HOH A 149 1082 152 HOH TIP . 
E 5 HOH A 150 1083 153 HOH TIP . 
E 5 HOH A 151 1084 154 HOH TIP . 
E 5 HOH A 152 1085 156 HOH TIP . 
E 5 HOH A 153 1086 157 HOH TIP . 
E 5 HOH A 154 1087 158 HOH TIP . 
E 5 HOH A 155 1088 159 HOH TIP . 
E 5 HOH A 156 1089 160 HOH TIP . 
E 5 HOH A 157 1090 161 HOH TIP . 
E 5 HOH A 158 1091 162 HOH TIP . 
E 5 HOH A 159 1092 163 HOH TIP . 
E 5 HOH A 160 1093 164 HOH TIP . 
E 5 HOH A 161 1094 165 HOH TIP . 
E 5 HOH A 162 1095 166 HOH TIP . 
E 5 HOH A 163 1096 167 HOH TIP . 
E 5 HOH A 164 1097 168 HOH TIP . 
E 5 HOH A 165 1098 169 HOH TIP . 
E 5 HOH A 166 1099 170 HOH TIP . 
E 5 HOH A 167 1100 171 HOH TIP . 
E 5 HOH A 168 1101 172 HOH TIP . 
E 5 HOH A 169 1102 173 HOH TIP . 
E 5 HOH A 170 1103 174 HOH TIP . 
E 5 HOH A 171 1104 175 HOH TIP . 
E 5 HOH A 172 1105 176 HOH TIP . 
E 5 HOH A 173 1106 177 HOH TIP . 
E 5 HOH A 174 1107 178 HOH TIP . 
E 5 HOH A 175 1108 179 HOH TIP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 4HY . . . D 4 15.297 19.92 27.322 1 55.86 ? C1 4HY 933 A 1 
HETATM 2 C C2 4HY . . . D 4 17.836 16.512 29.876 1 62.22 ? C2 4HY 933 A 1 
HETATM 3 C C3 4HY . . . D 4 15.318 19.853 28.712 1 56.36 ? C3 4HY 933 A 1 
HETATM 4 C C4 4HY . . . D 4 18.842 17.435 29.594 1 65.47 ? C4 4HY 933 A 1 
HETATM 5 C C5 4HY . . . D 4 15.79 18.71 29.35 1 56.43 ? C5 4HY 933 A 1 
HETATM 6 C C6 4HY . . . D 4 20.031 17.424 30.32 1 67.71 ? C6 4HY 933 A 1 
HETATM 7 C C7 4HY . . . D 4 16.247 17.628 28.6 1 54.98 ? C7 4HY 933 A 1 
HETATM 8 C C8 4HY . . . D 4 20.224 16.478 31.322 1 67.39 ? C8 4HY 933 A 1 
HETATM 9 C C9 4HY . . . D 4 16.219 17.695 27.208 1 52.6 ? C9 4HY 933 A 1 
HETATM 10 C C10 4HY . . . D 4 19.225 15.552 31.606 1 65.77 ? C10 4HY 933 A 1 
HETATM 11 C C11 4HY . . . D 4 15.748 18.838 26.57 1 53.35 ? C11 4HY 933 A 1 
HETATM 12 C C12 4HY . . . D 4 18.035 15.574 30.885 1 63.49 ? C12 4HY 933 A 1 
HETATM 13 C C13 4HY . . . D 4 14.788 21.182 26.622 1 57.54 ? C13 4HY 933 A 1 
HETATM 14 C C14 4HY . . . D 4 13.262 21.256 26.721 1 59.1 ? C14 4HY 933 A 1 
HETATM 15 I I1 4HY . . . D 4 15.772 18.627 31.444 1 61.65 ? I1 4HY 933 A 1 
HETATM 16 I I2 4HY . . . D 4 21.493 18.892 30.004 1 75.75 ? I2 4HY 933 A 1 
HETATM 17 I I3 4HY . . . D 4 16.748 16.019 26.068 1 43.71 ? I3 4HY 933 A 1 
HETATM 18 O O3 4HY . . . D 4 12.609 20.881 25.724 1 60.7 ? O3 4HY 933 A 1 
HETATM 19 O O2 4HY . . . D 4 16.651 16.475 29.202 1 58.07 ? O2 4HY 933 A 1 
HETATM 20 O O1 4HY . . . D 4 21.394 16.449 32.015 1 67.47 ? O1 4HY 933 A 1 
HETATM 21 O O4 4HY . . . D 4 12.784 21.687 27.793 1 60.17 ? O4 4HY 933 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           21 
#