data_2PIW # _model_server_result.job_id tn9nhWM_RLVtgywhKk6BEw _model_server_result.datetime_utc '2024-11-04 20:48:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2piw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":932}' # _entry.id 2PIW # _exptl.entry_id 2PIW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 650.973 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "3,5,3'TRIIODOTHYRONINE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2PIW _cell.length_a 55.66 _cell.length_b 66.5 _cell.length_c 72.09 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PIW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C15 H12 I3 N O4' _chem_comp.formula_weight 650.973 _chem_comp.id T3 _chem_comp.mon_nstd_flag . _chem_comp.name "3,5,3'TRIIODOTHYRONINE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'T3;THYROID HORMONE;LIOTHYRONINE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C3 T3 doub 344 n y C1 C11 T3 sing 345 n y C1 C13 T3 sing 346 n n C2 C4 T3 doub 347 n y C2 C12 T3 sing 348 n y C2 O2 T3 sing 349 n n C3 C5 T3 sing 350 n y C3 HC3 T3 sing 351 n n C4 C6 T3 sing 352 n y C4 HC4 T3 sing 353 n n C5 C7 T3 doub 354 n y C5 I1 T3 sing 355 n n C6 C8 T3 doub 356 n y C6 I2 T3 sing 357 n n C7 C9 T3 sing 358 n y C7 O2 T3 sing 359 n n C8 C10 T3 sing 360 n y C8 O1 T3 sing 361 n n C9 C11 T3 doub 362 n y C9 I3 T3 sing 363 n n C10 C12 T3 doub 364 n y C10 HC10 T3 sing 365 n n C11 HC11 T3 sing 366 n n C12 HC12 T3 sing 367 n n C13 CA T3 sing 368 n n C13 H131 T3 sing 369 n n C13 H132 T3 sing 370 n n CA C T3 sing 371 n n CA N T3 sing 372 n n CA HA T3 sing 373 n n C OXT T3 sing 374 n n C O T3 doub 375 n n N H2 T3 sing 376 n n N H T3 sing 377 n n O1 HO1 T3 sing 378 n n OXT HXT T3 sing 379 n n # _atom_sites.entry_id 2PIW _atom_sites.fract_transf_matrix[1][1] 0.017966 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015038 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013872 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DHT A 1 931 931 DHT DHT . C 3 T3 A 1 932 2 T3 T3 . D 3 T3 A 1 933 3 T3 T3 . E 4 HOH A 1 934 1 HOH TIP . E 4 HOH A 2 935 2 HOH TIP . E 4 HOH A 3 936 3 HOH TIP . E 4 HOH A 4 937 4 HOH TIP . E 4 HOH A 5 938 6 HOH TIP . E 4 HOH A 6 939 7 HOH TIP . E 4 HOH A 7 940 9 HOH TIP . E 4 HOH A 8 941 11 HOH TIP . E 4 HOH A 9 942 12 HOH TIP . E 4 HOH A 10 943 13 HOH TIP . E 4 HOH A 11 944 14 HOH TIP . E 4 HOH A 12 945 15 HOH TIP . E 4 HOH A 13 946 16 HOH TIP . E 4 HOH A 14 947 17 HOH TIP . E 4 HOH A 15 948 18 HOH TIP . E 4 HOH A 16 949 19 HOH TIP . E 4 HOH A 17 950 20 HOH TIP . E 4 HOH A 18 951 21 HOH TIP . E 4 HOH A 19 952 22 HOH TIP . E 4 HOH A 20 953 23 HOH TIP . E 4 HOH A 21 954 24 HOH TIP . E 4 HOH A 22 955 25 HOH TIP . E 4 HOH A 23 956 26 HOH TIP . E 4 HOH A 24 957 27 HOH TIP . E 4 HOH A 25 958 28 HOH TIP . E 4 HOH A 26 959 29 HOH TIP . E 4 HOH A 27 960 30 HOH TIP . E 4 HOH A 28 961 31 HOH TIP . E 4 HOH A 29 962 32 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 T3 . . . C 3 36.104 13.903 18.682 1 60.02 ? C1 T3 932 A 1 HETATM 2 C C2 T3 . . . C 3 37.22 8.917 17.931 1 65.38 ? C2 T3 932 A 1 HETATM 3 C C3 T3 . . . C 3 36.357 13.301 17.395 1 63.72 ? C3 T3 932 A 1 HETATM 4 C C4 T3 . . . C 3 35.876 8.68 18.162 1 68.65 ? C4 T3 932 A 1 HETATM 5 C C5 T3 . . . C 3 36.916 12.034 17.338 1 68.94 ? C5 T3 932 A 1 HETATM 6 C C6 T3 . . . C 3 35.223 7.651 17.559 1 61.47 ? C6 T3 932 A 1 HETATM 7 C C7 T3 . . . C 3 37.229 11.317 18.526 1 67.41 ? C7 T3 932 A 1 HETATM 8 C C8 T3 . . . C 3 35.939 6.778 16.69 1 60.18 ? C8 T3 932 A 1 HETATM 9 C C9 T3 . . . C 3 36.961 11.935 19.787 1 66.92 ? C9 T3 932 A 1 HETATM 10 C C10 T3 . . . C 3 37.322 6.999 16.441 1 65.08 ? C10 T3 932 A 1 HETATM 11 C C11 T3 . . . C 3 36.38 13.254 19.846 1 62.2 ? C11 T3 932 A 1 HETATM 12 C C12 T3 . . . C 3 37.968 8.081 17.075 1 63.72 ? C12 T3 932 A 1 HETATM 13 C C13 T3 . . . C 3 35.282 15.096 18.833 1 42.63 ? C13 T3 932 A 1 HETATM 14 C CA T3 . . . C 3 35.86 16.295 18.148 1 69.2 ? CA T3 932 A 1 HETATM 15 C C T3 . . . C 3 34.969 17.463 18.46 1 60.84 ? C T3 932 A 1 HETATM 16 I I1 T3 . . . C 3 37.334 11.196 15.442 1 67.85 ? I1 T3 932 A 1 HETATM 17 I I2 T3 . . . C 3 33.179 7.416 17.871 1 65.27 ? I2 T3 932 A 1 HETATM 18 I I3 T3 . . . C 3 37.44 10.89 21.566 1 69.15 ? I3 T3 932 A 1 HETATM 19 N N T3 . . . C 3 37.258 16.478 18.44 1 67.01 ? N T3 932 A 1 HETATM 20 O O1 T3 . . . C 3 35.259 5.71 16.09 1 60.67 ? O1 T3 932 A 1 HETATM 21 O O2 T3 . . . C 3 37.793 10.036 18.546 1 64.89 ? O2 T3 932 A 1 HETATM 22 O OXT T3 . . . C 3 35.383 18.321 19.365 1 60.88 ? OXT T3 932 A 1 HETATM 23 O O T3 . . . C 3 33.894 17.686 17.849 1 62.8 ? O T3 932 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #