data_2PJL # _model_server_result.job_id HOzLJ49VJEs2eM70Ns8Y9Q _model_server_result.datetime_utc '2024-11-22 22:12:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2pjl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 2PJL # _exptl.entry_id 2PJL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 332.482 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-CYCLOHEXYL-N-{[1-(4-METHYLPHENYL)-1H-INDOL-3-YL]METHYL}METHANAMINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2PJL _cell.length_a 96.465 _cell.length_b 96.465 _cell.length_c 134.59 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PJL _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C23 H28 N2' _chem_comp.formula_weight 332.482 _chem_comp.id 047 _chem_comp.mon_nstd_flag . _chem_comp.name 1-CYCLOHEXYL-N-{[1-(4-METHYLPHENYL)-1H-INDOL-3-YL]METHYL}METHANAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 047 sing 1 n n N1 C40 047 sing 2 n n N1 C5 047 sing 3 n n C2 C38 047 doub 4 n y C2 C3 047 sing 5 n y C3 C32 047 doub 6 n y C3 C4 047 sing 7 n n C4 C7 047 sing 8 n n C4 C5 047 doub 9 n n C5 H5 047 sing 10 n n C7 N10 047 sing 11 n n C7 H71 047 sing 12 n n C7 H72 047 sing 13 n n N10 C12 047 sing 14 n n N10 HN10 047 sing 15 n n C12 C15 047 sing 16 n n C12 H121 047 sing 17 n n C12 H122 047 sing 18 n n C15 C29 047 sing 19 n n C15 C17 047 sing 20 n n C15 H15 047 sing 21 n n C17 C20 047 sing 22 n n C17 H171 047 sing 23 n n C17 H172 047 sing 24 n n C20 C23 047 sing 25 n n C20 H201 047 sing 26 n n C20 H202 047 sing 27 n n C23 C26 047 sing 28 n n C23 H231 047 sing 29 n n C23 H232 047 sing 30 n n C26 C29 047 sing 31 n n C26 H261 047 sing 32 n n C26 H262 047 sing 33 n n C29 H291 047 sing 34 n n C29 H292 047 sing 35 n n C32 C34 047 sing 36 n y C32 H32 047 sing 37 n n C34 C36 047 doub 38 n y C34 H34 047 sing 39 n n C36 C38 047 sing 40 n y C36 H36 047 sing 41 n n C38 H38 047 sing 42 n n C40 C41 047 doub 43 n y C40 C48 047 sing 44 n y C41 C43 047 sing 45 n y C41 H41 047 sing 46 n n C43 C45 047 doub 47 n y C43 H43 047 sing 48 n n C45 C46 047 sing 49 n y C45 C50 047 sing 50 n n C46 C48 047 doub 51 n y C46 H46 047 sing 52 n n C48 H48 047 sing 53 n n C50 H501 047 sing 54 n n C50 H502 047 sing 55 n n C50 H503 047 sing 56 n n # _atom_sites.entry_id 2PJL _atom_sites.fract_transf_matrix[1][1] 0.010366 _atom_sites.fract_transf_matrix[1][2] 0.005985 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01197 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00743 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 047 A 1 600 1 047 047 . D 2 047 B 1 700 1 047 047 . E 3 HOH A 1 1 1 HOH HOH . E 3 HOH A 2 4 4 HOH HOH . E 3 HOH A 3 5 5 HOH HOH . E 3 HOH A 4 6 6 HOH HOH . E 3 HOH A 5 7 7 HOH HOH . E 3 HOH A 6 8 8 HOH HOH . E 3 HOH A 7 12 12 HOH HOH . E 3 HOH A 8 15 15 HOH HOH . E 3 HOH A 9 17 17 HOH HOH . E 3 HOH A 10 18 18 HOH HOH . E 3 HOH A 11 20 20 HOH HOH . E 3 HOH A 12 25 25 HOH HOH . E 3 HOH A 13 26 26 HOH HOH . E 3 HOH A 14 27 27 HOH HOH . E 3 HOH A 15 28 28 HOH HOH . E 3 HOH A 16 29 29 HOH HOH . E 3 HOH A 17 30 30 HOH HOH . E 3 HOH A 18 31 31 HOH HOH . E 3 HOH A 19 32 32 HOH HOH . E 3 HOH A 20 34 34 HOH HOH . E 3 HOH A 21 37 37 HOH HOH . E 3 HOH A 22 41 41 HOH HOH . E 3 HOH A 23 42 42 HOH HOH . E 3 HOH A 24 45 45 HOH HOH . E 3 HOH A 25 46 46 HOH HOH . E 3 HOH A 26 51 51 HOH HOH . E 3 HOH A 27 53 53 HOH HOH . E 3 HOH A 28 54 54 HOH HOH . E 3 HOH A 29 55 55 HOH HOH . E 3 HOH A 30 58 58 HOH HOH . E 3 HOH A 31 60 60 HOH HOH . E 3 HOH A 32 61 61 HOH HOH . E 3 HOH A 33 63 63 HOH HOH . E 3 HOH A 34 64 64 HOH HOH . E 3 HOH A 35 68 68 HOH HOH . E 3 HOH A 36 69 69 HOH HOH . E 3 HOH A 37 76 76 HOH HOH . E 3 HOH A 38 78 78 HOH HOH . E 3 HOH A 39 80 80 HOH HOH . E 3 HOH A 40 82 82 HOH HOH . E 3 HOH A 41 83 83 HOH HOH . E 3 HOH A 42 84 84 HOH HOH . E 3 HOH A 43 89 89 HOH HOH . E 3 HOH A 44 90 90 HOH HOH . E 3 HOH A 45 91 91 HOH HOH . E 3 HOH A 46 94 94 HOH HOH . E 3 HOH A 47 97 97 HOH HOH . E 3 HOH A 48 99 99 HOH HOH . E 3 HOH A 49 102 102 HOH HOH . E 3 HOH A 50 105 105 HOH HOH . E 3 HOH A 51 106 106 HOH HOH . E 3 HOH A 52 107 107 HOH HOH . E 3 HOH A 53 108 108 HOH HOH . E 3 HOH A 54 109 109 HOH HOH . E 3 HOH A 55 111 111 HOH HOH . E 3 HOH A 56 113 113 HOH HOH . E 3 HOH A 57 114 114 HOH HOH . E 3 HOH A 58 115 115 HOH HOH . E 3 HOH A 59 118 118 HOH HOH . E 3 HOH A 60 119 119 HOH HOH . E 3 HOH A 61 124 124 HOH HOH . E 3 HOH A 62 127 127 HOH HOH . E 3 HOH A 63 131 131 HOH HOH . E 3 HOH A 64 132 132 HOH HOH . E 3 HOH A 65 134 134 HOH HOH . E 3 HOH A 66 137 137 HOH HOH . E 3 HOH A 67 141 141 HOH HOH . E 3 HOH A 68 143 143 HOH HOH . E 3 HOH A 69 144 144 HOH HOH . E 3 HOH A 70 145 145 HOH HOH . E 3 HOH A 71 146 146 HOH HOH . E 3 HOH A 72 147 147 HOH HOH . E 3 HOH A 73 149 149 HOH HOH . E 3 HOH A 74 152 152 HOH HOH . E 3 HOH A 75 153 153 HOH HOH . E 3 HOH A 76 154 154 HOH HOH . E 3 HOH A 77 157 157 HOH HOH . E 3 HOH A 78 158 158 HOH HOH . E 3 HOH A 79 159 159 HOH HOH . E 3 HOH A 80 162 162 HOH HOH . E 3 HOH A 81 164 164 HOH HOH . E 3 HOH A 82 166 166 HOH HOH . E 3 HOH A 83 171 171 HOH HOH . E 3 HOH A 84 173 173 HOH HOH . E 3 HOH A 85 174 174 HOH HOH . E 3 HOH A 86 176 176 HOH HOH . E 3 HOH A 87 179 179 HOH HOH . E 3 HOH A 88 180 180 HOH HOH . E 3 HOH A 89 181 181 HOH HOH . E 3 HOH A 90 182 182 HOH HOH . E 3 HOH A 91 183 183 HOH HOH . E 3 HOH A 92 184 184 HOH HOH . E 3 HOH A 93 185 185 HOH HOH . E 3 HOH A 94 187 187 HOH HOH . E 3 HOH A 95 188 188 HOH HOH . E 3 HOH A 96 189 189 HOH HOH . E 3 HOH A 97 191 191 HOH HOH . E 3 HOH A 98 192 192 HOH HOH . E 3 HOH A 99 193 193 HOH HOH . E 3 HOH A 100 195 195 HOH HOH . E 3 HOH A 101 201 201 HOH HOH . E 3 HOH A 102 209 209 HOH HOH . E 3 HOH A 103 210 210 HOH HOH . E 3 HOH A 104 212 212 HOH HOH . E 3 HOH A 105 214 214 HOH HOH . E 3 HOH A 106 216 216 HOH HOH . E 3 HOH A 107 217 217 HOH HOH . E 3 HOH A 108 218 218 HOH HOH . E 3 HOH A 109 220 220 HOH HOH . E 3 HOH A 110 221 221 HOH HOH . E 3 HOH A 111 226 226 HOH HOH . E 3 HOH A 112 228 228 HOH HOH . E 3 HOH A 113 230 230 HOH HOH . E 3 HOH A 114 236 236 HOH HOH . F 3 HOH B 1 2 2 HOH HOH . F 3 HOH B 2 3 3 HOH HOH . F 3 HOH B 3 9 9 HOH HOH . F 3 HOH B 4 10 10 HOH HOH . F 3 HOH B 5 11 11 HOH HOH . F 3 HOH B 6 13 13 HOH HOH . F 3 HOH B 7 14 14 HOH HOH . F 3 HOH B 8 16 16 HOH HOH . F 3 HOH B 9 19 19 HOH HOH . F 3 HOH B 10 21 21 HOH HOH . F 3 HOH B 11 22 22 HOH HOH . F 3 HOH B 12 23 23 HOH HOH . F 3 HOH B 13 24 24 HOH HOH . F 3 HOH B 14 33 33 HOH HOH . F 3 HOH B 15 35 35 HOH HOH . F 3 HOH B 16 36 36 HOH HOH . F 3 HOH B 17 38 38 HOH HOH . F 3 HOH B 18 39 39 HOH HOH . F 3 HOH B 19 40 40 HOH HOH . F 3 HOH B 20 43 43 HOH HOH . F 3 HOH B 21 44 44 HOH HOH . F 3 HOH B 22 47 47 HOH HOH . F 3 HOH B 23 48 48 HOH HOH . F 3 HOH B 24 49 49 HOH HOH . F 3 HOH B 25 50 50 HOH HOH . F 3 HOH B 26 52 52 HOH HOH . F 3 HOH B 27 56 56 HOH HOH . F 3 HOH B 28 57 57 HOH HOH . F 3 HOH B 29 59 59 HOH HOH . F 3 HOH B 30 62 62 HOH HOH . F 3 HOH B 31 65 65 HOH HOH . F 3 HOH B 32 66 66 HOH HOH . F 3 HOH B 33 67 67 HOH HOH . F 3 HOH B 34 70 70 HOH HOH . F 3 HOH B 35 71 71 HOH HOH . F 3 HOH B 36 72 72 HOH HOH . F 3 HOH B 37 73 73 HOH HOH . F 3 HOH B 38 74 74 HOH HOH . F 3 HOH B 39 75 75 HOH HOH . F 3 HOH B 40 77 77 HOH HOH . F 3 HOH B 41 79 79 HOH HOH . F 3 HOH B 42 81 81 HOH HOH . F 3 HOH B 43 85 85 HOH HOH . F 3 HOH B 44 86 86 HOH HOH . F 3 HOH B 45 87 87 HOH HOH . F 3 HOH B 46 88 88 HOH HOH . F 3 HOH B 47 92 92 HOH HOH . F 3 HOH B 48 93 93 HOH HOH . F 3 HOH B 49 95 95 HOH HOH . F 3 HOH B 50 96 96 HOH HOH . F 3 HOH B 51 98 98 HOH HOH . F 3 HOH B 52 100 100 HOH HOH . F 3 HOH B 53 101 101 HOH HOH . F 3 HOH B 54 103 103 HOH HOH . F 3 HOH B 55 104 104 HOH HOH . F 3 HOH B 56 110 110 HOH HOH . F 3 HOH B 57 112 112 HOH HOH . F 3 HOH B 58 116 116 HOH HOH . F 3 HOH B 59 117 117 HOH HOH . F 3 HOH B 60 120 120 HOH HOH . F 3 HOH B 61 121 121 HOH HOH . F 3 HOH B 62 122 122 HOH HOH . F 3 HOH B 63 123 123 HOH HOH . F 3 HOH B 64 125 125 HOH HOH . F 3 HOH B 65 126 126 HOH HOH . F 3 HOH B 66 128 128 HOH HOH . F 3 HOH B 67 129 129 HOH HOH . F 3 HOH B 68 130 130 HOH HOH . F 3 HOH B 69 133 133 HOH HOH . F 3 HOH B 70 135 135 HOH HOH . F 3 HOH B 71 136 136 HOH HOH . F 3 HOH B 72 138 138 HOH HOH . F 3 HOH B 73 139 139 HOH HOH . F 3 HOH B 74 140 140 HOH HOH . F 3 HOH B 75 142 142 HOH HOH . F 3 HOH B 76 148 148 HOH HOH . F 3 HOH B 77 150 150 HOH HOH . F 3 HOH B 78 151 151 HOH HOH . F 3 HOH B 79 155 155 HOH HOH . F 3 HOH B 80 156 156 HOH HOH . F 3 HOH B 81 160 160 HOH HOH . F 3 HOH B 82 161 161 HOH HOH . F 3 HOH B 83 163 163 HOH HOH . F 3 HOH B 84 165 165 HOH HOH . F 3 HOH B 85 167 167 HOH HOH . F 3 HOH B 86 168 168 HOH HOH . F 3 HOH B 87 169 169 HOH HOH . F 3 HOH B 88 170 170 HOH HOH . F 3 HOH B 89 172 172 HOH HOH . F 3 HOH B 90 175 175 HOH HOH . F 3 HOH B 91 177 177 HOH HOH . F 3 HOH B 92 178 178 HOH HOH . F 3 HOH B 93 186 186 HOH HOH . F 3 HOH B 94 190 190 HOH HOH . F 3 HOH B 95 194 194 HOH HOH . F 3 HOH B 96 196 196 HOH HOH . F 3 HOH B 97 197 197 HOH HOH . F 3 HOH B 98 198 198 HOH HOH . F 3 HOH B 99 199 199 HOH HOH . F 3 HOH B 100 200 200 HOH HOH . F 3 HOH B 101 202 202 HOH HOH . F 3 HOH B 102 203 203 HOH HOH . F 3 HOH B 103 204 204 HOH HOH . F 3 HOH B 104 205 205 HOH HOH . F 3 HOH B 105 206 206 HOH HOH . F 3 HOH B 106 207 207 HOH HOH . F 3 HOH B 107 208 208 HOH HOH . F 3 HOH B 108 211 211 HOH HOH . F 3 HOH B 109 213 213 HOH HOH . F 3 HOH B 110 215 215 HOH HOH . F 3 HOH B 111 219 219 HOH HOH . F 3 HOH B 112 222 222 HOH HOH . F 3 HOH B 113 223 223 HOH HOH . F 3 HOH B 114 224 224 HOH HOH . F 3 HOH B 115 225 225 HOH HOH . F 3 HOH B 116 227 227 HOH HOH . F 3 HOH B 117 229 229 HOH HOH . F 3 HOH B 118 231 231 HOH HOH . F 3 HOH B 119 232 232 HOH HOH . F 3 HOH B 120 233 233 HOH HOH . F 3 HOH B 121 234 234 HOH HOH . F 3 HOH B 122 235 235 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 047 . . . C 2 -10.706 -8.157 7.767 1 31.06 ? N1 047 600 A 1 HETATM 2 C C2 047 . . . C 2 -11.477 -7.394 8.586 1 30.24 ? C2 047 600 A 1 HETATM 3 C C3 047 . . . C 2 -12.781 -7.886 8.574 1 30.39 ? C3 047 600 A 1 HETATM 4 C C4 047 . . . C 2 -12.694 -9.068 7.642 1 30.03 ? C4 047 600 A 1 HETATM 5 C C5 047 . . . C 2 -11.416 -9.133 7.232 1 30.22 ? C5 047 600 A 1 HETATM 6 C C7 047 . . . C 2 -13.828 -9.992 7.258 1 30.17 ? C7 047 600 A 1 HETATM 7 N N10 047 . . . C 2 -14.893 -9.305 6.487 1 30.46 ? N10 047 600 A 1 HETATM 8 C C12 047 . . . C 2 -14.536 -8.891 5.112 1 31.37 ? C12 047 600 A 1 HETATM 9 C C15 047 . . . C 2 -15.378 -7.68 4.604 1 31.54 ? C15 047 600 A 1 HETATM 10 C C17 047 . . . C 2 -16.884 -8.039 4.387 1 31.71 ? C17 047 600 A 1 HETATM 11 C C20 047 . . . C 2 -17.674 -6.842 3.791 1 30.94 ? C20 047 600 A 1 HETATM 12 C C23 047 . . . C 2 -17.451 -5.525 4.591 1 31.01 ? C23 047 600 A 1 HETATM 13 C C26 047 . . . C 2 -15.93 -5.229 4.8 1 32.08 ? C26 047 600 A 1 HETATM 14 C C29 047 . . . C 2 -15.25 -6.43 5.524 1 31.4 ? C29 047 600 A 1 HETATM 15 C C32 047 . . . C 2 -13.812 -7.301 9.318 1 30.21 ? C32 047 600 A 1 HETATM 16 C C34 047 . . . C 2 -13.469 -6.187 10.089 1 29.66 ? C34 047 600 A 1 HETATM 17 C C36 047 . . . C 2 -12.16 -5.678 10.102 1 29.76 ? C36 047 600 A 1 HETATM 18 C C38 047 . . . C 2 -11.139 -6.279 9.36 1 29.53 ? C38 047 600 A 1 HETATM 19 C C40 047 . . . C 2 -9.369 -8.008 7.538 1 30.24 ? C40 047 600 A 1 HETATM 20 C C41 047 . . . C 2 -8.569 -9.147 7.663 1 31.22 ? C41 047 600 A 1 HETATM 21 C C43 047 . . . C 2 -7.192 -9.084 7.443 1 30.91 ? C43 047 600 A 1 HETATM 22 C C45 047 . . . C 2 -6.589 -7.874 7.088 1 31.17 ? C45 047 600 A 1 HETATM 23 C C46 047 . . . C 2 -7.382 -6.721 6.949 1 31.53 ? C46 047 600 A 1 HETATM 24 C C48 047 . . . C 2 -8.768 -6.79 7.17 1 31.04 ? C48 047 600 A 1 HETATM 25 C C50 047 . . . C 2 -5.071 -7.871 6.866 1 30.89 ? C50 047 600 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #