data_2PL3 # _model_server_result.job_id L5gzQ8YBV5E4jgGIxZ2puw _model_server_result.datetime_utc '2024-12-26 22:42:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2pl3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 2PL3 # _exptl.entry_id 2PL3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2PL3 _cell.length_a 63.5 _cell.length_b 63.5 _cell.length_c 304.01 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PL3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 179 A GLU 223 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc2 C O1B ADP . A ADP 300 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc3 B MG MG . A MG 301 1_555 H O HOH . A HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc4 B MG MG . A MG 301 1_555 H O HOH . A HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc5 B MG MG . A MG 301 1_555 H O HOH . A HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc6 B MG MG . A MG 301 1_555 H O HOH . A HOH 469 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2PL3 _atom_sites.fract_transf_matrix[1][1] 0.015748 _atom_sites.fract_transf_matrix[1][2] 0.009092 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018184 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003289 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 301 301 MG MO4 . C 3 ADP A 1 300 300 ADP ADP . D 4 EOH A 1 400 400 EOH EOH . E 4 EOH A 1 401 401 EOH EOH . F 4 EOH A 1 402 402 EOH EOH . G 4 EOH A 1 403 403 EOH EOH . H 5 HOH A 1 404 301 HOH MO4 . H 5 HOH A 2 405 301 HOH MO4 . H 5 HOH A 3 406 301 HOH MO4 . H 5 HOH A 4 407 1 HOH HOH . H 5 HOH A 5 408 2 HOH HOH . H 5 HOH A 6 409 3 HOH HOH . H 5 HOH A 7 410 4 HOH HOH . H 5 HOH A 8 411 5 HOH HOH . H 5 HOH A 9 412 6 HOH HOH . H 5 HOH A 10 413 7 HOH HOH . H 5 HOH A 11 414 8 HOH HOH . H 5 HOH A 12 415 9 HOH HOH . H 5 HOH A 13 416 10 HOH HOH . H 5 HOH A 14 417 11 HOH HOH . H 5 HOH A 15 418 12 HOH HOH . H 5 HOH A 16 419 13 HOH HOH . H 5 HOH A 17 420 14 HOH HOH . H 5 HOH A 18 421 15 HOH HOH . H 5 HOH A 19 422 16 HOH HOH . H 5 HOH A 20 423 17 HOH HOH . H 5 HOH A 21 424 18 HOH HOH . H 5 HOH A 22 425 19 HOH HOH . H 5 HOH A 23 426 20 HOH HOH . H 5 HOH A 24 427 21 HOH HOH . H 5 HOH A 25 428 22 HOH HOH . H 5 HOH A 26 429 23 HOH HOH . H 5 HOH A 27 430 24 HOH HOH . H 5 HOH A 28 431 25 HOH HOH . H 5 HOH A 29 432 26 HOH HOH . H 5 HOH A 30 433 27 HOH HOH . H 5 HOH A 31 434 28 HOH HOH . H 5 HOH A 32 435 29 HOH HOH . H 5 HOH A 33 436 30 HOH HOH . H 5 HOH A 34 437 31 HOH HOH . H 5 HOH A 35 438 32 HOH HOH . H 5 HOH A 36 439 33 HOH HOH . H 5 HOH A 37 440 34 HOH HOH . H 5 HOH A 38 441 35 HOH HOH . H 5 HOH A 39 442 36 HOH HOH . H 5 HOH A 40 443 37 HOH HOH . H 5 HOH A 41 444 38 HOH HOH . H 5 HOH A 42 445 39 HOH HOH . H 5 HOH A 43 446 40 HOH HOH . H 5 HOH A 44 447 41 HOH HOH . H 5 HOH A 45 448 42 HOH HOH . H 5 HOH A 46 449 43 HOH HOH . H 5 HOH A 47 450 44 HOH HOH . H 5 HOH A 48 451 45 HOH HOH . H 5 HOH A 49 452 46 HOH HOH . H 5 HOH A 50 453 47 HOH HOH . H 5 HOH A 51 454 48 HOH HOH . H 5 HOH A 52 455 49 HOH HOH . H 5 HOH A 53 456 50 HOH HOH . H 5 HOH A 54 457 51 HOH HOH . H 5 HOH A 55 458 52 HOH HOH . H 5 HOH A 56 459 53 HOH HOH . H 5 HOH A 57 460 54 HOH HOH . H 5 HOH A 58 461 55 HOH HOH . H 5 HOH A 59 462 56 HOH HOH . H 5 HOH A 60 463 57 HOH HOH . H 5 HOH A 61 464 58 HOH HOH . H 5 HOH A 62 465 59 HOH HOH . H 5 HOH A 63 466 60 HOH HOH . H 5 HOH A 64 467 61 HOH HOH . H 5 HOH A 65 468 62 HOH HOH . H 5 HOH A 66 469 301 HOH MO4 . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -19.103 _atom_site.Cartn_y -13.003 _atom_site.Cartn_z 12.394 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #