data_2PLM # _model_server_result.job_id WYPAoIRrrqCDd6ocvmu5ww _model_server_result.datetime_utc '2024-11-02 13:39:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2plm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":407}' # _entry.id 2PLM # _exptl.entry_id 2PLM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2PLM _cell.length_a 113.278 _cell.length_b 113.278 _cell.length_c 80.298 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PLM _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 55 A HIS 55 1_555 B ZN ZN . A ZN 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc2 A NE2 HIS 57 A HIS 57 1_555 B ZN ZN . A ZN 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc3 A NE2 HIS 200 A HIS 200 1_555 B ZN ZN . A ZN 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc4 A OD1 ASP 279 A ASP 279 1_555 B ZN ZN . A ZN 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc5 B ZN ZN . A ZN 407 1_555 D O HOH . A HOH 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2PLM _atom_sites.fract_transf_matrix[1][1] 0.008828 _atom_sites.fract_transf_matrix[1][2] 0.005097 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010194 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012454 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 407 1 ZN ZN . C 3 SIB A 1 408 1 SIB SIH . D 4 HOH A 1 409 1 HOH HOH . D 4 HOH A 2 410 2 HOH HOH . D 4 HOH A 3 411 5 HOH HOH . D 4 HOH A 4 412 6 HOH HOH . D 4 HOH A 5 413 7 HOH HOH . D 4 HOH A 6 414 9 HOH HOH . D 4 HOH A 7 415 10 HOH HOH . D 4 HOH A 8 416 11 HOH HOH . D 4 HOH A 9 417 12 HOH HOH . D 4 HOH A 10 418 16 HOH HOH . D 4 HOH A 11 419 17 HOH HOH . D 4 HOH A 12 420 18 HOH HOH . D 4 HOH A 13 421 19 HOH HOH . D 4 HOH A 14 422 20 HOH HOH . D 4 HOH A 15 423 21 HOH HOH . D 4 HOH A 16 424 22 HOH HOH . D 4 HOH A 17 425 23 HOH HOH . D 4 HOH A 18 426 24 HOH HOH . D 4 HOH A 19 427 25 HOH HOH . D 4 HOH A 20 428 26 HOH HOH . D 4 HOH A 21 429 27 HOH HOH . D 4 HOH A 22 430 28 HOH HOH . D 4 HOH A 23 431 29 HOH HOH . D 4 HOH A 24 432 30 HOH HOH . D 4 HOH A 25 433 31 HOH HOH . D 4 HOH A 26 434 32 HOH HOH . D 4 HOH A 27 435 33 HOH HOH . D 4 HOH A 28 436 34 HOH HOH . D 4 HOH A 29 437 35 HOH HOH . D 4 HOH A 30 438 36 HOH HOH . D 4 HOH A 31 439 37 HOH HOH . D 4 HOH A 32 440 38 HOH HOH . D 4 HOH A 33 441 39 HOH HOH . D 4 HOH A 34 442 40 HOH HOH . D 4 HOH A 35 443 41 HOH HOH . D 4 HOH A 36 444 42 HOH HOH . D 4 HOH A 37 445 44 HOH HOH . D 4 HOH A 38 446 45 HOH HOH . D 4 HOH A 39 447 46 HOH HOH . D 4 HOH A 40 448 47 HOH HOH . D 4 HOH A 41 449 49 HOH HOH . D 4 HOH A 42 450 50 HOH HOH . D 4 HOH A 43 451 51 HOH HOH . D 4 HOH A 44 452 52 HOH HOH . D 4 HOH A 45 453 53 HOH HOH . D 4 HOH A 46 454 54 HOH HOH . D 4 HOH A 47 455 55 HOH HOH . D 4 HOH A 48 456 56 HOH HOH . D 4 HOH A 49 457 58 HOH HOH . D 4 HOH A 50 458 59 HOH HOH . D 4 HOH A 51 459 60 HOH HOH . D 4 HOH A 52 460 61 HOH HOH . D 4 HOH A 53 461 64 HOH HOH . D 4 HOH A 54 462 65 HOH HOH . D 4 HOH A 55 463 66 HOH HOH . D 4 HOH A 56 464 67 HOH HOH . D 4 HOH A 57 465 68 HOH HOH . D 4 HOH A 58 466 70 HOH HOH . D 4 HOH A 59 467 72 HOH HOH . D 4 HOH A 60 468 73 HOH HOH . D 4 HOH A 61 469 75 HOH HOH . D 4 HOH A 62 470 76 HOH HOH . D 4 HOH A 63 471 77 HOH HOH . D 4 HOH A 64 472 78 HOH HOH . D 4 HOH A 65 473 79 HOH HOH . D 4 HOH A 66 474 80 HOH HOH . D 4 HOH A 67 475 82 HOH HOH . D 4 HOH A 68 476 85 HOH HOH . D 4 HOH A 69 477 86 HOH HOH . D 4 HOH A 70 478 88 HOH HOH . D 4 HOH A 71 479 89 HOH HOH . D 4 HOH A 72 480 90 HOH HOH . D 4 HOH A 73 481 94 HOH HOH . D 4 HOH A 74 482 97 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 40.646 _atom_site.Cartn_y 34.597 _atom_site.Cartn_z -4.432 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.68 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 407 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #