data_2PMP # _model_server_result.job_id 4W5T5p2dEl-3ETZ70NWHPQ _model_server_result.datetime_utc '2024-10-19 16:50:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2pmp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 2PMP # _exptl.entry_id 2PMP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2PMP _cell.length_a 135.795 _cell.length_b 135.795 _cell.length_c 135.795 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PMP _symmetry.cell_setting ? _symmetry.Int_Tables_number 214 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 3 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 11 A ASP 11 1_555 B ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc2 A NE2 HIS 13 A HIS 13 1_555 B ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc3 A ND1 HIS 45 A HIS 45 1_555 B ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 296 n n P O2 PO4 sing 297 n n P O3 PO4 sing 298 n n P O4 PO4 sing 299 n n # _atom_sites.entry_id 2PMP _atom_sites.fract_transf_matrix[1][1] 0.007364 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007364 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007364 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 500 500 ZN ZN . C 3 PO4 A 1 701 701 PO4 PO4 . D 4 CL A 1 702 702 CL CL . E 5 C5P A 1 700 700 C5P C5P . F 6 HOH A 1 703 1 HOH HOH . F 6 HOH A 2 704 2 HOH HOH . F 6 HOH A 3 705 3 HOH HOH . F 6 HOH A 4 706 4 HOH HOH . F 6 HOH A 5 707 5 HOH HOH . F 6 HOH A 6 708 6 HOH HOH . F 6 HOH A 7 709 7 HOH HOH . F 6 HOH A 8 710 8 HOH HOH . F 6 HOH A 9 711 9 HOH HOH . F 6 HOH A 10 712 10 HOH HOH . F 6 HOH A 11 713 11 HOH HOH . F 6 HOH A 12 714 12 HOH HOH . F 6 HOH A 13 715 13 HOH HOH . F 6 HOH A 14 716 14 HOH HOH . F 6 HOH A 15 717 15 HOH HOH . F 6 HOH A 16 718 16 HOH HOH . F 6 HOH A 17 719 17 HOH HOH . F 6 HOH A 18 720 18 HOH HOH . F 6 HOH A 19 721 19 HOH HOH . F 6 HOH A 20 722 20 HOH HOH . F 6 HOH A 21 723 21 HOH HOH . F 6 HOH A 22 724 22 HOH HOH . F 6 HOH A 23 725 23 HOH HOH . F 6 HOH A 24 726 24 HOH HOH . F 6 HOH A 25 727 25 HOH HOH . F 6 HOH A 26 728 26 HOH HOH . F 6 HOH A 27 729 27 HOH HOH . F 6 HOH A 28 730 28 HOH HOH . F 6 HOH A 29 731 29 HOH HOH . F 6 HOH A 30 732 30 HOH HOH . F 6 HOH A 31 733 31 HOH HOH . F 6 HOH A 32 734 32 HOH HOH . F 6 HOH A 33 735 33 HOH HOH . F 6 HOH A 34 736 34 HOH HOH . F 6 HOH A 35 737 35 HOH HOH . F 6 HOH A 36 738 36 HOH HOH . F 6 HOH A 37 739 37 HOH HOH . F 6 HOH A 38 740 38 HOH HOH . F 6 HOH A 39 741 39 HOH HOH . F 6 HOH A 40 742 40 HOH HOH . F 6 HOH A 41 743 41 HOH HOH . F 6 HOH A 42 744 42 HOH HOH . F 6 HOH A 43 745 43 HOH HOH . F 6 HOH A 44 746 44 HOH HOH . F 6 HOH A 45 747 45 HOH HOH . F 6 HOH A 46 748 46 HOH HOH . F 6 HOH A 47 749 47 HOH HOH . F 6 HOH A 48 750 48 HOH HOH . F 6 HOH A 49 751 49 HOH HOH . F 6 HOH A 50 752 50 HOH HOH . F 6 HOH A 51 753 51 HOH HOH . F 6 HOH A 52 754 52 HOH HOH . F 6 HOH A 53 755 53 HOH HOH . F 6 HOH A 54 756 54 HOH HOH . F 6 HOH A 55 757 55 HOH HOH . F 6 HOH A 56 758 56 HOH HOH . F 6 HOH A 57 759 57 HOH HOH . F 6 HOH A 58 760 58 HOH HOH . F 6 HOH A 59 761 59 HOH HOH . F 6 HOH A 60 762 60 HOH HOH . F 6 HOH A 61 763 61 HOH HOH . F 6 HOH A 62 764 62 HOH HOH . F 6 HOH A 63 765 63 HOH HOH . F 6 HOH A 64 766 64 HOH HOH . F 6 HOH A 65 767 65 HOH HOH . F 6 HOH A 66 768 66 HOH HOH . F 6 HOH A 67 769 67 HOH HOH . F 6 HOH A 68 770 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 3 -11.086 -10.879 -11.587 0.33 70.99 ? P PO4 701 A 1 HETATM 2 O O1 PO4 . . . C 3 -9.762 -11.511 -11.207 0.33 70.28 ? O1 PO4 701 A 1 HETATM 3 O O2 PO4 . . . C 3 -12.025 -10.923 -10.399 0.33 70.67 ? O2 PO4 701 A 1 HETATM 4 O O3 PO4 . . . C 3 -10.874 -9.443 -12.015 0.33 69.69 ? O3 PO4 701 A 1 HETATM 5 O O4 PO4 . . . C 3 -11.69 -11.658 -12.73 0.33 70.18 ? O4 PO4 701 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #