data_2PNO # _model_server_result.job_id dmkF2VBUP9xpBKHim_FFDg _model_server_result.datetime_utc '2024-11-23 22:23:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2pno # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"JA","auth_seq_id":204}' # _entry.id 2PNO # _exptl.entry_id 2PNO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2PNO _cell.length_a 117.5 _cell.length_b 293.9 _cell.length_c 206.5 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PNO _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 PISA trimeric 3 author_and_software_defined_assembly 3 PISA trimeric 3 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA 1 1 D,E,F,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB 2 1 G,H,I,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB 3 1 J,K,L,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 M N N ? 2 V N N ? 2 DA N N ? 2 JA N N ? 2 NA N N ? 2 YA N N ? 2 DB N N ? 2 JB N N ? 2 MB N N ? 2 RB N N ? 2 UB N N ? 2 XB N N # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 129 n n N1 HN11 GSH sing 130 n n N1 HN12 GSH sing 131 n n CA1 C1 GSH sing 132 n n CA1 CB1 GSH sing 133 n n CA1 HA1 GSH sing 134 n n C1 O11 GSH doub 135 n n C1 O12 GSH sing 136 n n O12 H12 GSH sing 137 n n CB1 CG1 GSH sing 138 n n CB1 HB12 GSH sing 139 n n CB1 HB13 GSH sing 140 n n CG1 CD1 GSH sing 141 n n CG1 HG12 GSH sing 142 n n CG1 HG13 GSH sing 143 n n CD1 OE1 GSH doub 144 n n CD1 N2 GSH sing 145 n n N2 CA2 GSH sing 146 n n N2 HN2 GSH sing 147 n n CA2 C2 GSH sing 148 n n CA2 CB2 GSH sing 149 n n CA2 HA2 GSH sing 150 n n C2 O2 GSH doub 151 n n C2 N3 GSH sing 152 n n CB2 SG2 GSH sing 153 n n CB2 HB22 GSH sing 154 n n CB2 HB23 GSH sing 155 n n SG2 HSG GSH sing 156 n n N3 CA3 GSH sing 157 n n N3 HN3 GSH sing 158 n n CA3 C3 GSH sing 159 n n CA3 HA31 GSH sing 160 n n CA3 HA32 GSH sing 161 n n C3 O31 GSH doub 162 n n C3 O32 GSH sing 163 n n O32 H32 GSH sing 164 n n # _atom_sites.entry_id 2PNO _atom_sites.fract_transf_matrix[1][1] 0.008511 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003403 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004843 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 GSH A 1 201 201 GSH GTT . N 3 LMT A 1 215 215 LMT LMT . O 3 LMT A 1 217 217 LMT LMT . P 3 LMT A 1 228 228 LMT LMT . Q 3 LMT A 1 229 229 LMT LMT . R 3 LMT A 1 244 244 LMT LMT . S 3 LMT A 1 245 245 LMT LMT . T 3 LMT A 1 256 256 LMT LMT . U 3 LMT A 1 262 262 LMT LMT . V 2 GSH B 1 202 202 GSH GTT . W 3 LMT B 1 213 213 LMT LMT . X 3 LMT B 1 218 218 LMT LMT . Y 3 LMT B 1 227 227 LMT LMT . Z 3 LMT B 1 236 236 LMT LMT . AA 3 LMT B 1 242 242 LMT LMT . BA 3 LMT B 1 259 259 LMT LMT . CA 3 LMT B 1 260 260 LMT LMT . DA 2 GSH C 1 203 203 GSH GTT . EA 3 LMT C 1 214 214 LMT LMT . FA 3 LMT C 1 216 216 LMT LMT . GA 3 LMT C 1 237 237 LMT LMT . HA 3 LMT C 1 246 246 LMT LMT . IA 3 LMT C 1 261 261 LMT LMT . JA 2 GSH D 1 204 204 GSH GTT . KA 3 LMT D 1 220 220 LMT LMT . LA 3 LMT D 1 238 238 LMT LMT . MA 3 LMT D 1 247 247 LMT LMT . NA 2 GSH E 1 205 205 GSH GTT . OA 3 LMT E 1 221 221 LMT LMT . PA 3 LMT E 1 230 230 LMT LMT . QA 3 LMT E 1 231 231 LMT LMT . RA 3 LMT E 1 232 232 LMT LMT . SA 3 LMT E 1 243 243 LMT LMT . TA 3 LMT E 1 249 249 LMT LMT . UA 3 LMT E 1 263 263 LMT LMT . VA 3 LMT E 1 266 266 LMT LMT . WA 3 LMT E 1 268 268 LMT LMT . XA 3 LMT E 1 269 269 LMT LMT . YA 2 GSH F 1 206 206 GSH GTT . ZA 3 LMT F 1 219 219 LMT LMT . AB 3 LMT F 1 233 233 LMT LMT . BB 3 LMT F 1 241 241 LMT LMT . CB 3 LMT F 1 248 248 LMT LMT . DB 2 GSH G 1 207 207 GSH GTT . EB 3 LMT G 1 222 222 LMT LMT . FB 3 LMT G 1 235 235 LMT LMT . GB 3 LMT G 1 251 251 LMT LMT . HB 3 LMT G 1 264 264 LMT LMT . IB 3 LMT G 1 267 267 LMT LMT . JB 2 GSH H 1 208 208 GSH GTT . KB 3 LMT H 1 234 234 LMT LMT . LB 3 LMT H 1 250 250 LMT LMT . MB 2 GSH I 1 209 209 GSH GTT . NB 3 LMT I 1 240 240 LMT LMT . OB 3 LMT I 1 252 252 LMT LMT . PB 3 LMT I 1 257 257 LMT LMT . QB 3 LMT I 1 258 258 LMT LMT . RB 2 GSH J 1 210 210 GSH GTT . SB 3 LMT J 1 239 239 LMT LMT . TB 3 LMT J 1 253 253 LMT LMT . UB 2 GSH K 1 211 211 GSH GTT . VB 3 LMT K 1 224 224 LMT LMT . WB 3 LMT K 1 225 225 LMT LMT . XB 2 GSH L 1 212 212 GSH GTT . YB 3 LMT L 1 223 223 LMT LMT . ZB 3 LMT L 1 226 226 LMT LMT . AC 3 LMT L 1 254 254 LMT LMT . BC 3 LMT L 1 255 255 LMT LMT . CC 3 LMT L 1 265 265 LMT LMT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . JA 2 29.197 -48.522 -20.344 1 62.47 ? N1 GSH 204 D 1 HETATM 2 C CA1 GSH . . . JA 2 28.335 -48.569 -19.181 1 62.9 ? CA1 GSH 204 D 1 HETATM 3 C C1 GSH . . . JA 2 28.935 -47.737 -18.078 1 64.49 ? C1 GSH 204 D 1 HETATM 4 O O11 GSH . . . JA 2 30.131 -47.392 -18.141 1 65.37 ? O11 GSH 204 D 1 HETATM 5 O O12 GSH . . . JA 2 28.259 -47.362 -17.091 1 64.36 ? O12 GSH 204 D 1 HETATM 6 C CB1 GSH . . . JA 2 28.193 -50.034 -18.787 1 61.7 ? CB1 GSH 204 D 1 HETATM 7 C CG1 GSH . . . JA 2 27.212 -50.286 -17.652 1 60.71 ? CG1 GSH 204 D 1 HETATM 8 C CD1 GSH . . . JA 2 26.005 -49.41 -17.808 1 60.67 ? CD1 GSH 204 D 1 HETATM 9 O OE1 GSH . . . JA 2 25.134 -49.599 -18.888 1 61.81 ? OE1 GSH 204 D 1 HETATM 10 N N2 GSH . . . JA 2 25.827 -48.47 -16.895 1 61.41 ? N2 GSH 204 D 1 HETATM 11 C CA2 GSH . . . JA 2 24.584 -47.73 -16.812 1 61.37 ? CA2 GSH 204 D 1 HETATM 12 C C2 GSH . . . JA 2 24.757 -46.296 -17.231 1 58.48 ? C2 GSH 204 D 1 HETATM 13 O O2 GSH . . . JA 2 23.654 -45.41 -17.247 1 57.44 ? O2 GSH 204 D 1 HETATM 14 C CB2 GSH . . . JA 2 24.106 -47.765 -15.37 1 63.56 ? CB2 GSH 204 D 1 HETATM 15 S SG2 GSH . . . JA 2 25.409 -47.143 -14.278 1 69.96 ? SG2 GSH 204 D 1 HETATM 16 N N3 GSH . . . JA 2 25.987 -45.916 -17.561 1 56.12 ? N3 GSH 204 D 1 HETATM 17 C CA3 GSH . . . JA 2 26.335 -44.515 -17.631 1 57.05 ? CA3 GSH 204 D 1 HETATM 18 C C3 GSH . . . JA 2 27.21 -44.24 -18.825 1 58.77 ? C3 GSH 204 D 1 HETATM 19 O O31 GSH . . . JA 2 27.576 -45.172 -19.58 1 58.48 ? O31 GSH 204 D 1 HETATM 20 O O32 GSH . . . JA 2 27.572 -43.067 -19.069 1 59.29 ? O32 GSH 204 D 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #