data_2PO0
#
_model_server_result.job_id            Ic8PDvZ5dgB_6CrACO1K5A 
_model_server_result.datetime_utc      '2024-11-23 16:19:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2po0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":280}' 
#
_entry.id    2PO0 
#
_exptl.entry_id    2PO0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2PO0 
_cell.length_a            94.2 
_cell.length_b            94.2 
_cell.length_c            127.7 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2PO0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        150 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 3 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -47.1 81.579593 0 
3 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -94.2 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 281 n n 
C1 H11 MPD sing 282 n n 
C1 H12 MPD sing 283 n n 
C1 H13 MPD sing 284 n n 
C2 O2 MPD sing 285 n n 
C2 CM MPD sing 286 n n 
C2 C3 MPD sing 287 n n 
O2 HO2 MPD sing 288 n n 
CM HM1 MPD sing 289 n n 
CM HM2 MPD sing 290 n n 
CM HM3 MPD sing 291 n n 
C3 C4 MPD sing 292 n n 
C3 H31 MPD sing 293 n n 
C3 H32 MPD sing 294 n n 
C4 O4 MPD sing 295 n n 
C4 C5 MPD sing 296 n n 
C4 H4 MPD sing 297 n n 
O4 HO4 MPD sing 298 n n 
C5 H51 MPD sing 299 n n 
C5 H52 MPD sing 300 n n 
C5 H53 MPD sing 301 n n 
#
_atom_sites.entry_id                     2PO0 
_atom_sites.fract_transf_matrix[1][1]    0.010616 
_atom_sites.fract_transf_matrix[1][2]    0.006129 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012258 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007831 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ADP A 1 300 300 ADP ADP . 
D 4 MPD A 1 250 250 MPD MPD . 
E 4 MPD B 1 280 280 MPD MPD . 
F 4 MPD B 1 281 281 MPD MPD . 
G 5 HOH A 1 301 246 HOH HOH . 
G 5 HOH A 2 302 247 HOH HOH . 
G 5 HOH A 3 303 248 HOH HOH . 
G 5 HOH A 4 304 9 HOH HOH . 
G 5 HOH A 5 305 10 HOH HOH . 
G 5 HOH A 6 306 11 HOH HOH . 
G 5 HOH A 7 307 13 HOH HOH . 
G 5 HOH A 8 308 16 HOH HOH . 
G 5 HOH A 9 309 20 HOH HOH . 
G 5 HOH A 10 310 22 HOH HOH . 
G 5 HOH A 11 311 27 HOH HOH . 
G 5 HOH A 12 312 29 HOH HOH . 
G 5 HOH A 13 313 32 HOH HOH . 
G 5 HOH A 14 314 36 HOH HOH . 
G 5 HOH A 15 315 37 HOH HOH . 
G 5 HOH A 16 316 39 HOH HOH . 
G 5 HOH A 17 317 41 HOH HOH . 
G 5 HOH A 18 318 46 HOH HOH . 
G 5 HOH A 19 319 48 HOH HOH . 
G 5 HOH A 20 320 50 HOH HOH . 
G 5 HOH A 21 321 51 HOH HOH . 
G 5 HOH A 22 322 52 HOH HOH . 
G 5 HOH A 23 323 56 HOH HOH . 
G 5 HOH A 24 324 59 HOH HOH . 
G 5 HOH A 25 325 63 HOH HOH . 
G 5 HOH A 26 326 69 HOH HOH . 
G 5 HOH A 27 327 71 HOH HOH . 
G 5 HOH A 28 328 72 HOH HOH . 
G 5 HOH A 29 329 80 HOH HOH . 
G 5 HOH A 30 330 82 HOH HOH . 
G 5 HOH A 31 331 85 HOH HOH . 
G 5 HOH A 32 332 86 HOH HOH . 
G 5 HOH A 33 333 87 HOH HOH . 
G 5 HOH A 34 334 90 HOH HOH . 
G 5 HOH A 35 335 93 HOH HOH . 
G 5 HOH A 36 336 97 HOH HOH . 
G 5 HOH A 37 337 99 HOH HOH . 
G 5 HOH A 38 338 108 HOH HOH . 
G 5 HOH A 39 339 109 HOH HOH . 
G 5 HOH A 40 340 110 HOH HOH . 
G 5 HOH A 41 341 111 HOH HOH . 
G 5 HOH A 42 342 115 HOH HOH . 
G 5 HOH A 43 343 116 HOH HOH . 
G 5 HOH A 44 344 120 HOH HOH . 
G 5 HOH A 45 345 121 HOH HOH . 
G 5 HOH A 46 346 122 HOH HOH . 
G 5 HOH A 47 347 123 HOH HOH . 
G 5 HOH A 48 348 124 HOH HOH . 
G 5 HOH A 49 349 125 HOH HOH . 
G 5 HOH A 50 350 126 HOH HOH . 
G 5 HOH A 51 351 139 HOH HOH . 
G 5 HOH A 52 352 140 HOH HOH . 
G 5 HOH A 53 353 144 HOH HOH . 
G 5 HOH A 54 354 145 HOH HOH . 
G 5 HOH A 55 355 146 HOH HOH . 
G 5 HOH A 56 356 147 HOH HOH . 
G 5 HOH A 57 357 148 HOH HOH . 
G 5 HOH A 58 358 149 HOH HOH . 
G 5 HOH A 59 359 160 HOH HOH . 
H 5 HOH B 1 282 1 HOH HOH . 
H 5 HOH B 2 283 2 HOH HOH . 
H 5 HOH B 3 284 3 HOH HOH . 
H 5 HOH B 4 285 4 HOH HOH . 
H 5 HOH B 5 286 5 HOH HOH . 
H 5 HOH B 6 287 6 HOH HOH . 
H 5 HOH B 7 288 7 HOH HOH . 
H 5 HOH B 8 289 8 HOH HOH . 
H 5 HOH B 9 290 12 HOH HOH . 
H 5 HOH B 10 291 14 HOH HOH . 
H 5 HOH B 11 292 15 HOH HOH . 
H 5 HOH B 12 293 18 HOH HOH . 
H 5 HOH B 13 294 19 HOH HOH . 
H 5 HOH B 14 295 21 HOH HOH . 
H 5 HOH B 15 296 23 HOH HOH . 
H 5 HOH B 16 297 24 HOH HOH . 
H 5 HOH B 17 298 25 HOH HOH . 
H 5 HOH B 18 299 26 HOH HOH . 
H 5 HOH B 19 300 28 HOH HOH . 
H 5 HOH B 20 301 30 HOH HOH . 
H 5 HOH B 21 302 31 HOH HOH . 
H 5 HOH B 22 303 33 HOH HOH . 
H 5 HOH B 23 304 34 HOH HOH . 
H 5 HOH B 24 305 35 HOH HOH . 
H 5 HOH B 25 306 38 HOH HOH . 
H 5 HOH B 26 307 40 HOH HOH . 
H 5 HOH B 27 308 42 HOH HOH . 
H 5 HOH B 28 309 45 HOH HOH . 
H 5 HOH B 29 310 47 HOH HOH . 
H 5 HOH B 30 311 49 HOH HOH . 
H 5 HOH B 31 312 53 HOH HOH . 
H 5 HOH B 32 313 54 HOH HOH . 
H 5 HOH B 33 314 55 HOH HOH . 
H 5 HOH B 34 315 57 HOH HOH . 
H 5 HOH B 35 316 58 HOH HOH . 
H 5 HOH B 36 317 60 HOH HOH . 
H 5 HOH B 37 318 61 HOH HOH . 
H 5 HOH B 38 319 62 HOH HOH . 
H 5 HOH B 39 320 64 HOH HOH . 
H 5 HOH B 40 321 66 HOH HOH . 
H 5 HOH B 41 322 67 HOH HOH . 
H 5 HOH B 42 323 68 HOH HOH . 
H 5 HOH B 43 324 70 HOH HOH . 
H 5 HOH B 44 325 73 HOH HOH . 
H 5 HOH B 45 326 74 HOH HOH . 
H 5 HOH B 46 327 75 HOH HOH . 
H 5 HOH B 47 328 76 HOH HOH . 
H 5 HOH B 48 329 81 HOH HOH . 
H 5 HOH B 49 330 83 HOH HOH . 
H 5 HOH B 50 331 88 HOH HOH . 
H 5 HOH B 51 332 91 HOH HOH . 
H 5 HOH B 52 333 92 HOH HOH . 
H 5 HOH B 53 334 94 HOH HOH . 
H 5 HOH B 54 335 95 HOH HOH . 
H 5 HOH B 55 336 96 HOH HOH . 
H 5 HOH B 56 337 98 HOH HOH . 
H 5 HOH B 57 338 101 HOH HOH . 
H 5 HOH B 58 339 102 HOH HOH . 
H 5 HOH B 59 340 103 HOH HOH . 
H 5 HOH B 60 341 106 HOH HOH . 
H 5 HOH B 61 342 107 HOH HOH . 
H 5 HOH B 62 343 112 HOH HOH . 
H 5 HOH B 63 344 113 HOH HOH . 
H 5 HOH B 64 345 114 HOH HOH . 
H 5 HOH B 65 346 117 HOH HOH . 
H 5 HOH B 66 347 118 HOH HOH . 
H 5 HOH B 67 348 119 HOH HOH . 
H 5 HOH B 68 349 127 HOH HOH . 
H 5 HOH B 69 350 128 HOH HOH . 
H 5 HOH B 70 351 129 HOH HOH . 
H 5 HOH B 71 352 130 HOH HOH . 
H 5 HOH B 72 353 131 HOH HOH . 
H 5 HOH B 73 354 132 HOH HOH . 
H 5 HOH B 74 355 133 HOH HOH . 
H 5 HOH B 75 356 134 HOH HOH . 
H 5 HOH B 76 357 135 HOH HOH . 
H 5 HOH B 77 358 136 HOH HOH . 
H 5 HOH B 78 359 137 HOH HOH . 
H 5 HOH B 79 360 138 HOH HOH . 
H 5 HOH B 80 361 141 HOH HOH . 
H 5 HOH B 81 362 142 HOH HOH . 
H 5 HOH B 82 363 143 HOH HOH . 
H 5 HOH B 83 364 150 HOH HOH . 
H 5 HOH B 84 365 151 HOH HOH . 
H 5 HOH B 85 366 152 HOH HOH . 
H 5 HOH B 86 367 153 HOH HOH . 
H 5 HOH B 87 368 154 HOH HOH . 
H 5 HOH B 88 369 155 HOH HOH . 
H 5 HOH B 89 370 156 HOH HOH . 
H 5 HOH B 90 371 157 HOH HOH . 
H 5 HOH B 91 372 158 HOH HOH . 
H 5 HOH B 92 373 159 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . E 4 -39.109 68.463 47.998 1 58.8 ? C1 MPD 280 B 1 
HETATM 2 C C2 MPD . . . E 4 -37.965 68.953 47.08 1 59.46 ? C2 MPD 280 B 1 
HETATM 3 O O2 MPD . . . E 4 -37.71 70.362 47.402 1 62.3 ? O2 MPD 280 B 1 
HETATM 4 C CM MPD . . . E 4 -38.392 68.931 45.607 1 55.86 ? CM MPD 280 B 1 
HETATM 5 C C3 MPD . . . E 4 -36.74 68.049 47.362 1 55.37 ? C3 MPD 280 B 1 
HETATM 6 C C4 MPD . . . E 4 -35.37 68.639 47.002 1 58.12 ? C4 MPD 280 B 1 
HETATM 7 O O4 MPD . . . E 4 -34.588 67.639 46.358 1 54.44 ? O4 MPD 280 B 1 
HETATM 8 C C5 MPD . . . E 4 -34.663 69.198 48.24 1 57.82 ? C5 MPD 280 B 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           8 
#