data_2POO # _model_server_result.job_id G1Cz935cyei7oQ_VGvjkMg _model_server_result.datetime_utc '2024-10-16 10:29:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2poo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":806}' # _entry.id 2POO # _exptl.entry_id 2POO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2POO _cell.length_a 50.98 _cell.length_b 65.15 _cell.length_c 105.68 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2POO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 15 A GLU 43 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? metalc ? metalc2 A OE2 GLU 15 A GLU 43 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? metalc ? metalc3 A OD1 ASP 27 A ASP 55 1_555 E CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? metalc ? metalc4 A OD2 ASP 27 A ASP 55 1_555 E CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.706 ? metalc ? metalc5 A OD2 ASP 28 A ASP 56 1_555 F CA CA . A CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc6 A O PRO 29 A PRO 57 1_555 F CA CA . A CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? metalc ? metalc7 A OD1 ASN 71 A ASN 99 1_555 E CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.378 ? metalc ? metalc8 A OD1 ASN 72 A ASN 100 1_555 E CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? metalc ? metalc9 A O VAL 73 A VAL 101 1_555 F CA CA . A CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc10 A OH TYR 131 A TYR 159 1_555 D CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.847 ? metalc ? metalc11 A OE1 GLU 183 A GLU 211 1_555 D CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.365 ? metalc ? metalc12 A OE2 GLU 183 A GLU 211 1_555 E CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? metalc ? metalc13 A OE1 GLU 183 A GLU 211 1_555 E CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.056 ? metalc ? metalc14 A OE2 GLU 199 A GLU 227 1_555 D CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? metalc ? metalc15 A OD2 ASP 230 A ASP 258 1_555 G CA CA . A CA 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc16 A OE1 GLU 232 A GLU 260 1_555 D CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc17 A OE2 GLU 232 A GLU 260 1_555 D CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? metalc ? metalc18 A OE2 GLU 232 A GLU 260 1_555 G CA CA . A CA 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.838 ? metalc ? metalc19 A OE1 GLN 251 A GLN 279 1_555 G CA CA . A CA 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.092 ? metalc ? metalc20 A OD1 ASP 280 A ASP 308 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc21 A OD2 ASP 280 A ASP 308 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc22 A O GLY 281 A GLY 309 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc23 A OD1 ASP 308 A ASP 336 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc24 A OD2 ASP 308 A ASP 336 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.124 ? metalc ? metalc25 A O GLU 310 A GLU 338 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc26 A OD1 ASN 311 A ASN 339 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.761 ? metalc ? metalc27 A O ILE 312 A ILE 340 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc28 A OD1 ASP 313 A ASP 341 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.621 ? metalc ? metalc29 H O HOH . A HOH 507 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? metalc ? metalc30 H O HOH . A HOH 515 1_555 F CA CA . A CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc31 H O HOH . A HOH 522 1_555 E CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.399 ? metalc ? metalc32 H O HOH . A HOH 526 1_555 F CA CA . A CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc33 H O HOH . A HOH 529 1_555 B CA CA . A CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.072 ? metalc ? metalc34 H O HOH . A HOH 533 1_555 F CA CA . A CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc35 H O HOH . A HOH 552 1_555 D CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.283 ? metalc ? metalc36 H O HOH . A HOH 552 1_555 E CA CA . A CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc37 H O HOH . A HOH 554 1_555 C CA CA . A CA 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.865 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2POO _atom_sites.fract_transf_matrix[1][1] 0.019615 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015349 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009462 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 801 801 CA CA . C 2 CA A 1 802 802 CA CA . D 2 CA A 1 803 803 CA CA . E 2 CA A 1 804 804 CA CA . F 2 CA A 1 805 805 CA CA . G 2 CA A 1 806 806 CA CA . H 3 HOH A 1 501 501 HOH HOH . H 3 HOH A 2 502 502 HOH HOH . H 3 HOH A 3 503 503 HOH HOH . H 3 HOH A 4 504 504 HOH HOH . H 3 HOH A 5 505 505 HOH HOH . H 3 HOH A 6 506 506 HOH HOH . H 3 HOH A 7 507 507 HOH HOH . H 3 HOH A 8 508 508 HOH HOH . H 3 HOH A 9 511 511 HOH HOH . H 3 HOH A 10 512 512 HOH HOH . H 3 HOH A 11 513 513 HOH HOH . H 3 HOH A 12 514 514 HOH HOH . H 3 HOH A 13 515 515 HOH HOH . H 3 HOH A 14 516 516 HOH HOH . H 3 HOH A 15 517 517 HOH HOH . H 3 HOH A 16 518 518 HOH HOH . H 3 HOH A 17 519 519 HOH HOH . H 3 HOH A 18 520 520 HOH HOH . H 3 HOH A 19 521 521 HOH HOH . H 3 HOH A 20 522 522 HOH HOH . H 3 HOH A 21 524 524 HOH HOH . H 3 HOH A 22 525 525 HOH HOH . H 3 HOH A 23 526 526 HOH HOH . H 3 HOH A 24 527 527 HOH HOH . H 3 HOH A 25 528 528 HOH HOH . H 3 HOH A 26 529 529 HOH HOH . H 3 HOH A 27 530 530 HOH HOH . H 3 HOH A 28 531 531 HOH HOH . H 3 HOH A 29 532 532 HOH HOH . H 3 HOH A 30 533 533 HOH HOH . H 3 HOH A 31 534 534 HOH HOH . H 3 HOH A 32 535 535 HOH HOH . H 3 HOH A 33 536 536 HOH HOH . H 3 HOH A 34 538 538 HOH HOH . H 3 HOH A 35 539 539 HOH HOH . H 3 HOH A 36 540 540 HOH HOH . H 3 HOH A 37 541 541 HOH HOH . H 3 HOH A 38 542 542 HOH HOH . H 3 HOH A 39 543 543 HOH HOH . H 3 HOH A 40 544 544 HOH HOH . H 3 HOH A 41 545 545 HOH HOH . H 3 HOH A 42 546 546 HOH HOH . H 3 HOH A 43 547 547 HOH HOH . H 3 HOH A 44 548 548 HOH HOH . H 3 HOH A 45 549 549 HOH HOH . H 3 HOH A 46 550 550 HOH HOH . H 3 HOH A 47 552 552 HOH HOH . H 3 HOH A 48 553 553 HOH HOH . H 3 HOH A 49 554 554 HOH HOH . H 3 HOH A 50 555 555 HOH HOH . H 3 HOH A 51 556 556 HOH HOH . H 3 HOH A 52 557 557 HOH HOH . H 3 HOH A 53 558 558 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x 0.408 _atom_site.Cartn_y 11.985 _atom_site.Cartn_z 15.681 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 57.42 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 806 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #