data_2PQL # _model_server_result.job_id '_PerQXI-qHEybHDEl2nhiQ' _model_server_result.datetime_utc '2024-11-05 00:33:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2pql # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":145}' # _entry.id 2PQL # _exptl.entry_id 2PQL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 160.216 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(1H-INDOL-3-YL)ETHANAMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2PQL _cell.length_a 63.101 _cell.length_b 63.101 _cell.length_c 42.596 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PQL _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 6 1_555 A SG CYS 39 A CYS 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 20 A CYS 19 1_555 A SG CYS 145 A CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf3 A SG CYS 78 A CYS 77 1_555 A SG CYS 97 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? # _chem_comp.formula 'C10 H12 N2' _chem_comp.formula_weight 160.216 _chem_comp.id TSS _chem_comp.mon_nstd_flag . _chem_comp.name 2-(1H-INDOL-3-YL)ETHANAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms TRYPTAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA TSS sing 306 n n N1 HN11 TSS sing 307 n n N1 HN12 TSS sing 308 n n CA CB TSS sing 309 n n CA HA1 TSS sing 310 n n CA HA2 TSS sing 311 n n CB CG TSS sing 312 n n CB HB1 TSS sing 313 n n CB HB2 TSS sing 314 n n CG CD1 TSS doub 315 n y CG CD2 TSS sing 316 n y CD1 NE1 TSS sing 317 n y CD1 HD1 TSS sing 318 n n NE1 CE2 TSS sing 319 n y NE1 HE1 TSS sing 320 n n CE2 CD2 TSS sing 321 n y CE2 CZ2 TSS doub 322 n y CD2 CE3 TSS doub 323 n y CZ2 CH2 TSS sing 324 n y CZ2 HZ2 TSS sing 325 n n CH2 CZ3 TSS doub 326 n y CH2 HH2 TSS sing 327 n n CZ3 CE3 TSS sing 328 n y CZ3 HZ3 TSS sing 329 n n CE3 HE3 TSS sing 330 n n # _atom_sites.entry_id 2PQL _atom_sites.fract_transf_matrix[1][1] 0.015848 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015848 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023476 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TSS A 1 145 145 TSS TSS . C 3 HOH A 1 146 1 HOH HOH . C 3 HOH A 2 147 2 HOH HOH . C 3 HOH A 3 148 3 HOH HOH . C 3 HOH A 4 149 4 HOH HOH . C 3 HOH A 5 150 5 HOH HOH . C 3 HOH A 6 151 6 HOH HOH . C 3 HOH A 7 152 7 HOH HOH . C 3 HOH A 8 153 8 HOH HOH . C 3 HOH A 9 154 9 HOH HOH . C 3 HOH A 10 155 10 HOH HOH . C 3 HOH A 11 156 11 HOH HOH . C 3 HOH A 12 157 12 HOH HOH . C 3 HOH A 13 158 13 HOH HOH . C 3 HOH A 14 159 14 HOH HOH . C 3 HOH A 15 160 15 HOH HOH . C 3 HOH A 16 161 16 HOH HOH . C 3 HOH A 17 162 17 HOH HOH . C 3 HOH A 18 163 18 HOH HOH . C 3 HOH A 19 164 19 HOH HOH . C 3 HOH A 20 165 20 HOH HOH . C 3 HOH A 21 166 22 HOH HOH . C 3 HOH A 22 167 23 HOH HOH . C 3 HOH A 23 168 24 HOH HOH . C 3 HOH A 24 169 25 HOH HOH . C 3 HOH A 25 170 26 HOH HOH . C 3 HOH A 26 171 27 HOH HOH . C 3 HOH A 27 172 28 HOH HOH . C 3 HOH A 28 173 30 HOH HOH . C 3 HOH A 29 174 31 HOH HOH . C 3 HOH A 30 175 32 HOH HOH . C 3 HOH A 31 176 33 HOH HOH . C 3 HOH A 32 177 34 HOH HOH . C 3 HOH A 33 178 35 HOH HOH . C 3 HOH A 34 179 36 HOH HOH . C 3 HOH A 35 180 37 HOH HOH . C 3 HOH A 36 181 38 HOH HOH . C 3 HOH A 37 182 39 HOH HOH . C 3 HOH A 38 183 40 HOH HOH . C 3 HOH A 39 184 41 HOH HOH . C 3 HOH A 40 185 42 HOH HOH . C 3 HOH A 41 186 43 HOH HOH . C 3 HOH A 42 187 44 HOH HOH . C 3 HOH A 43 188 45 HOH HOH . C 3 HOH A 44 189 46 HOH HOH . C 3 HOH A 45 190 47 HOH HOH . C 3 HOH A 46 191 48 HOH HOH . C 3 HOH A 47 192 49 HOH HOH . C 3 HOH A 48 193 50 HOH HOH . C 3 HOH A 49 194 51 HOH HOH . C 3 HOH A 50 195 54 HOH HOH . C 3 HOH A 51 196 56 HOH HOH . C 3 HOH A 52 197 57 HOH HOH . C 3 HOH A 53 198 58 HOH HOH . C 3 HOH A 54 199 59 HOH HOH . C 3 HOH A 55 200 60 HOH HOH . C 3 HOH A 56 201 61 HOH HOH . C 3 HOH A 57 202 62 HOH HOH . C 3 HOH A 58 203 63 HOH HOH . C 3 HOH A 59 204 64 HOH HOH . C 3 HOH A 60 205 65 HOH HOH . C 3 HOH A 61 206 66 HOH HOH . C 3 HOH A 62 207 67 HOH HOH . C 3 HOH A 63 208 68 HOH HOH . C 3 HOH A 64 209 70 HOH HOH . C 3 HOH A 65 210 71 HOH HOH . C 3 HOH A 66 211 72 HOH HOH . C 3 HOH A 67 212 73 HOH HOH . C 3 HOH A 68 213 74 HOH HOH . C 3 HOH A 69 214 75 HOH HOH . C 3 HOH A 70 215 76 HOH HOH . C 3 HOH A 71 216 77 HOH HOH . C 3 HOH A 72 217 78 HOH HOH . C 3 HOH A 73 218 79 HOH HOH . C 3 HOH A 74 219 80 HOH HOH . C 3 HOH A 75 220 81 HOH HOH . C 3 HOH A 76 221 82 HOH HOH . C 3 HOH A 77 222 83 HOH HOH . C 3 HOH A 78 223 84 HOH HOH . C 3 HOH A 79 224 85 HOH HOH . C 3 HOH A 80 225 86 HOH HOH . C 3 HOH A 81 226 87 HOH HOH . C 3 HOH A 82 227 88 HOH HOH . C 3 HOH A 83 228 89 HOH HOH . C 3 HOH A 84 229 90 HOH HOH . C 3 HOH A 85 230 91 HOH HOH . C 3 HOH A 86 231 92 HOH HOH . C 3 HOH A 87 232 93 HOH HOH . C 3 HOH A 88 233 94 HOH HOH . C 3 HOH A 89 234 95 HOH HOH . C 3 HOH A 90 235 96 HOH HOH . C 3 HOH A 91 236 97 HOH HOH . C 3 HOH A 92 237 98 HOH HOH . C 3 HOH A 93 238 99 HOH HOH . C 3 HOH A 94 239 100 HOH HOH . C 3 HOH A 95 240 101 HOH HOH . C 3 HOH A 96 241 102 HOH HOH . C 3 HOH A 97 242 103 HOH HOH . C 3 HOH A 98 243 104 HOH HOH . C 3 HOH A 99 244 105 HOH HOH . C 3 HOH A 100 245 106 HOH HOH . C 3 HOH A 101 246 107 HOH HOH . C 3 HOH A 102 247 108 HOH HOH . C 3 HOH A 103 248 109 HOH HOH . C 3 HOH A 104 249 110 HOH HOH . C 3 HOH A 105 250 111 HOH HOH . C 3 HOH A 106 251 112 HOH HOH . C 3 HOH A 107 252 113 HOH HOH . C 3 HOH A 108 253 114 HOH HOH . C 3 HOH A 109 254 115 HOH HOH . C 3 HOH A 110 255 116 HOH HOH . C 3 HOH A 111 256 117 HOH HOH . C 3 HOH A 112 257 118 HOH HOH . C 3 HOH A 113 258 119 HOH HOH . C 3 HOH A 114 259 120 HOH HOH . C 3 HOH A 115 260 121 HOH HOH . C 3 HOH A 116 261 122 HOH HOH . C 3 HOH A 117 262 123 HOH HOH . C 3 HOH A 118 263 124 HOH HOH . C 3 HOH A 119 264 125 HOH HOH . C 3 HOH A 120 265 126 HOH HOH . C 3 HOH A 121 266 127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 TSS . . . B 2 13.661 -23.705 6.355 1 19.63 ? N1 TSS 145 A 1 HETATM 2 C CA TSS . . . B 2 12.492 -22.857 6.196 1 17.84 ? CA TSS 145 A 1 HETATM 3 C CB TSS . . . B 2 12.921 -21.388 6.127 1 17.04 ? CB TSS 145 A 1 HETATM 4 C CG TSS . . . B 2 11.717 -20.553 5.727 1 16.88 ? CG TSS 145 A 1 HETATM 5 C CD1 TSS . . . B 2 10.355 -20.811 5.971 1 16.4 ? CD1 TSS 145 A 1 HETATM 6 N NE1 TSS . . . B 2 9.563 -19.831 5.433 1 14.44 ? NE1 TSS 145 A 1 HETATM 7 C CE2 TSS . . . B 2 10.405 -18.953 4.857 1 20.64 ? CE2 TSS 145 A 1 HETATM 8 C CD2 TSS . . . B 2 11.68 -19.37 5.025 1 19.4 ? CD2 TSS 145 A 1 HETATM 9 C CZ2 TSS . . . B 2 10.008 -17.803 4.213 1 14.82 ? CZ2 TSS 145 A 1 HETATM 10 C CH2 TSS . . . B 2 11.059 -17.013 3.766 1 18.47 ? CH2 TSS 145 A 1 HETATM 11 C CZ3 TSS . . . B 2 12.38 -17.476 3.813 1 17.41 ? CZ3 TSS 145 A 1 HETATM 12 C CE3 TSS . . . B 2 12.726 -18.617 4.525 1 16.31 ? CE3 TSS 145 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #