data_2PR3 # _model_server_result.job_id wM83zSnn5t7063tAA2PERA _model_server_result.datetime_utc '2024-10-13 04:20:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2pr3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":902}' # _entry.id 2PR3 # _exptl.entry_id 2PR3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2PR3 _cell.length_a 56.485 _cell.length_b 72.354 _cell.length_c 77.88 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PR3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 12 A CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf2 A SG CYS 27 A CYS 42 1_555 A SG CYS 43 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf3 A SG CYS 108 A CYS 122 1_555 B SG CYS 45 B CYS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf4 A SG CYS 156 A CYS 168 1_555 A SG CYS 170 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf5 A SG CYS 181 A CYS 191 1_555 A SG CYS 209 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 B SG CYS 2 B CYS 1 1_555 B SG CYS 13 B CYS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf7 B SG CYS 9 B CYS 8 1_555 B SG CYS 22 B CYS 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf8 B SG CYS 24 B CYS 23 1_555 B SG CYS 37 B CYS 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc1 A OD1 ASP 56 A ASP 70 1_555 C CA CA . A CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc2 A O ASN 58 A ASN 72 1_555 C CA CA . A CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc3 A O GLN 61 A GLN 75 1_555 C CA CA . A CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.648 ? metalc ? metalc4 A OE1 GLU 66 A GLU 80 1_555 C CA CA . A CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc5 A O TYR 173 A TYR 185 1_555 D CA CA . A CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc6 A O ASP 174 A ASP 185 1_555 D CA CA . A CA 902 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc7 A O ARG 211 A ARG 222 1_555 D CA CA . A CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc8 A O LYS 214 A LYS 224 1_555 D CA CA . A CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc9 D CA CA . A CA 902 1_555 F O HOH . A HOH 1036 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.953 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2PR3 _atom_sites.fract_transf_matrix[1][1] 0.017704 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013821 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01284 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 901 901 CA CA . D 3 CA A 1 902 902 CA CA . E 4 237 A 1 1001 1001 237 237 . F 5 HOH A 1 1002 1 HOH HOH . F 5 HOH A 2 1003 2 HOH HOH . F 5 HOH A 3 1004 4 HOH HOH . F 5 HOH A 4 1005 5 HOH HOH . F 5 HOH A 5 1006 6 HOH HOH . F 5 HOH A 6 1007 8 HOH HOH . F 5 HOH A 7 1008 9 HOH HOH . F 5 HOH A 8 1009 10 HOH HOH . F 5 HOH A 9 1010 11 HOH HOH . F 5 HOH A 10 1011 13 HOH HOH . F 5 HOH A 11 1012 14 HOH HOH . F 5 HOH A 12 1013 15 HOH HOH . F 5 HOH A 13 1014 16 HOH HOH . F 5 HOH A 14 1015 17 HOH HOH . F 5 HOH A 15 1016 18 HOH HOH . F 5 HOH A 16 1017 19 HOH HOH . F 5 HOH A 17 1018 20 HOH HOH . F 5 HOH A 18 1019 21 HOH HOH . F 5 HOH A 19 1020 22 HOH HOH . F 5 HOH A 20 1021 23 HOH HOH . F 5 HOH A 21 1022 24 HOH HOH . F 5 HOH A 22 1023 25 HOH HOH . F 5 HOH A 23 1024 26 HOH HOH . F 5 HOH A 24 1025 27 HOH HOH . F 5 HOH A 25 1026 29 HOH HOH . F 5 HOH A 26 1027 30 HOH HOH . F 5 HOH A 27 1028 31 HOH HOH . F 5 HOH A 28 1029 32 HOH HOH . F 5 HOH A 29 1030 33 HOH HOH . F 5 HOH A 30 1031 34 HOH HOH . F 5 HOH A 31 1032 35 HOH HOH . F 5 HOH A 32 1033 36 HOH HOH . F 5 HOH A 33 1034 37 HOH HOH . F 5 HOH A 34 1035 38 HOH HOH . F 5 HOH A 35 1036 39 HOH HOH . F 5 HOH A 36 1037 40 HOH HOH . F 5 HOH A 37 1038 41 HOH HOH . F 5 HOH A 38 1039 42 HOH HOH . F 5 HOH A 39 1040 44 HOH HOH . F 5 HOH A 40 1041 45 HOH HOH . F 5 HOH A 41 1042 46 HOH HOH . F 5 HOH A 42 1043 47 HOH HOH . F 5 HOH A 43 1044 48 HOH HOH . F 5 HOH A 44 1045 49 HOH HOH . F 5 HOH A 45 1046 50 HOH HOH . F 5 HOH A 46 1047 51 HOH HOH . F 5 HOH A 47 1048 54 HOH HOH . F 5 HOH A 48 1049 55 HOH HOH . F 5 HOH A 49 1050 56 HOH HOH . F 5 HOH A 50 1051 57 HOH HOH . F 5 HOH A 51 1052 58 HOH HOH . F 5 HOH A 52 1053 59 HOH HOH . F 5 HOH A 53 1054 61 HOH HOH . F 5 HOH A 54 1055 62 HOH HOH . F 5 HOH A 55 1056 64 HOH HOH . F 5 HOH A 56 1057 67 HOH HOH . F 5 HOH A 57 1058 68 HOH HOH . F 5 HOH A 58 1059 70 HOH HOH . F 5 HOH A 59 1060 71 HOH HOH . F 5 HOH A 60 1061 72 HOH HOH . F 5 HOH A 61 1062 73 HOH HOH . F 5 HOH A 62 1063 74 HOH HOH . F 5 HOH A 63 1064 75 HOH HOH . F 5 HOH A 64 1065 76 HOH HOH . F 5 HOH A 65 1066 77 HOH HOH . F 5 HOH A 66 1067 79 HOH HOH . F 5 HOH A 67 1068 80 HOH HOH . F 5 HOH A 68 1069 83 HOH HOH . F 5 HOH A 69 1070 84 HOH HOH . F 5 HOH A 70 1071 85 HOH HOH . F 5 HOH A 71 1072 86 HOH HOH . F 5 HOH A 72 1073 87 HOH HOH . F 5 HOH A 73 1074 88 HOH HOH . F 5 HOH A 74 1075 90 HOH HOH . F 5 HOH A 75 1076 92 HOH HOH . F 5 HOH A 76 1077 94 HOH HOH . F 5 HOH A 77 1078 95 HOH HOH . F 5 HOH A 78 1079 96 HOH HOH . F 5 HOH A 79 1080 97 HOH HOH . F 5 HOH A 80 1081 99 HOH HOH . F 5 HOH A 81 1082 100 HOH HOH . F 5 HOH A 82 1083 101 HOH HOH . F 5 HOH A 83 1084 102 HOH HOH . F 5 HOH A 84 1085 104 HOH HOH . F 5 HOH A 85 1086 105 HOH HOH . F 5 HOH A 86 1087 106 HOH HOH . F 5 HOH A 87 1088 107 HOH HOH . F 5 HOH A 88 1089 109 HOH HOH . F 5 HOH A 89 1090 111 HOH HOH . F 5 HOH A 90 1091 113 HOH HOH . F 5 HOH A 91 1092 114 HOH HOH . F 5 HOH A 92 1093 116 HOH HOH . F 5 HOH A 93 1094 118 HOH HOH . F 5 HOH A 94 1095 120 HOH HOH . F 5 HOH A 95 1096 121 HOH HOH . F 5 HOH A 96 1097 122 HOH HOH . F 5 HOH A 97 1098 123 HOH HOH . F 5 HOH A 98 1099 124 HOH HOH . F 5 HOH A 99 1100 127 HOH HOH . F 5 HOH A 100 1101 128 HOH HOH . F 5 HOH A 101 1102 131 HOH HOH . F 5 HOH A 102 1103 132 HOH HOH . F 5 HOH A 103 1104 133 HOH HOH . F 5 HOH A 104 1105 134 HOH HOH . F 5 HOH A 105 1106 135 HOH HOH . F 5 HOH A 106 1107 139 HOH HOH . F 5 HOH A 107 1108 140 HOH HOH . F 5 HOH A 108 1109 143 HOH HOH . F 5 HOH A 109 1110 144 HOH HOH . F 5 HOH A 110 1111 145 HOH HOH . F 5 HOH A 111 1112 146 HOH HOH . F 5 HOH A 112 1113 147 HOH HOH . F 5 HOH A 113 1114 149 HOH HOH . F 5 HOH A 114 1115 150 HOH HOH . F 5 HOH A 115 1116 151 HOH HOH . F 5 HOH A 116 1117 152 HOH HOH . F 5 HOH A 117 1118 153 HOH HOH . F 5 HOH A 118 1119 154 HOH HOH . F 5 HOH A 119 1120 155 HOH HOH . F 5 HOH A 120 1121 156 HOH HOH . F 5 HOH A 121 1122 157 HOH HOH . F 5 HOH A 122 1123 159 HOH HOH . F 5 HOH A 123 1124 160 HOH HOH . F 5 HOH A 124 1125 161 HOH HOH . F 5 HOH A 125 1126 165 HOH HOH . F 5 HOH A 126 1127 166 HOH HOH . F 5 HOH A 127 1128 167 HOH HOH . F 5 HOH A 128 1129 168 HOH HOH . F 5 HOH A 129 1130 169 HOH HOH . F 5 HOH A 130 1131 170 HOH HOH . F 5 HOH A 131 1132 171 HOH HOH . F 5 HOH A 132 1133 172 HOH HOH . F 5 HOH A 133 1134 173 HOH HOH . F 5 HOH A 134 1135 175 HOH HOH . F 5 HOH A 135 1136 176 HOH HOH . F 5 HOH A 136 1137 177 HOH HOH . F 5 HOH A 137 1138 180 HOH HOH . F 5 HOH A 138 1139 181 HOH HOH . F 5 HOH A 139 1140 183 HOH HOH . F 5 HOH A 140 1141 184 HOH HOH . F 5 HOH A 141 1142 185 HOH HOH . F 5 HOH A 142 1143 186 HOH HOH . F 5 HOH A 143 1144 188 HOH HOH . F 5 HOH A 144 1145 189 HOH HOH . F 5 HOH A 145 1146 190 HOH HOH . F 5 HOH A 146 1147 191 HOH HOH . F 5 HOH A 147 1148 192 HOH HOH . F 5 HOH A 148 1149 193 HOH HOH . F 5 HOH A 149 1150 194 HOH HOH . F 5 HOH A 150 1151 195 HOH HOH . F 5 HOH A 151 1152 196 HOH HOH . F 5 HOH A 152 1153 197 HOH HOH . F 5 HOH A 153 1154 198 HOH HOH . F 5 HOH A 154 1155 199 HOH HOH . F 5 HOH A 155 1156 201 HOH HOH . F 5 HOH A 156 1157 203 HOH HOH . F 5 HOH A 157 1158 204 HOH HOH . F 5 HOH A 158 1159 205 HOH HOH . F 5 HOH A 159 1160 206 HOH HOH . F 5 HOH A 160 1161 207 HOH HOH . F 5 HOH A 161 1162 208 HOH HOH . F 5 HOH A 162 1163 210 HOH HOH . F 5 HOH A 163 1164 211 HOH HOH . F 5 HOH A 164 1165 212 HOH HOH . F 5 HOH A 165 1166 214 HOH HOH . F 5 HOH A 166 1167 215 HOH HOH . F 5 HOH A 167 1168 216 HOH HOH . F 5 HOH A 168 1169 217 HOH HOH . F 5 HOH A 169 1170 218 HOH HOH . F 5 HOH A 170 1171 219 HOH HOH . F 5 HOH A 171 1172 220 HOH HOH . F 5 HOH A 172 1173 222 HOH HOH . G 5 HOH B 1 51 3 HOH HOH . G 5 HOH B 2 52 7 HOH HOH . G 5 HOH B 3 53 12 HOH HOH . G 5 HOH B 4 54 28 HOH HOH . G 5 HOH B 5 55 52 HOH HOH . G 5 HOH B 6 56 53 HOH HOH . G 5 HOH B 7 57 60 HOH HOH . G 5 HOH B 8 58 63 HOH HOH . G 5 HOH B 9 59 65 HOH HOH . G 5 HOH B 10 60 66 HOH HOH . G 5 HOH B 11 61 69 HOH HOH . G 5 HOH B 12 62 78 HOH HOH . G 5 HOH B 13 63 81 HOH HOH . G 5 HOH B 14 64 82 HOH HOH . G 5 HOH B 15 65 89 HOH HOH . G 5 HOH B 16 66 91 HOH HOH . G 5 HOH B 17 67 93 HOH HOH . G 5 HOH B 18 68 98 HOH HOH . G 5 HOH B 19 69 103 HOH HOH . G 5 HOH B 20 70 108 HOH HOH . G 5 HOH B 21 71 110 HOH HOH . G 5 HOH B 22 72 112 HOH HOH . G 5 HOH B 23 73 115 HOH HOH . G 5 HOH B 24 74 117 HOH HOH . G 5 HOH B 25 75 119 HOH HOH . G 5 HOH B 26 76 125 HOH HOH . G 5 HOH B 27 77 126 HOH HOH . G 5 HOH B 28 78 129 HOH HOH . G 5 HOH B 29 79 130 HOH HOH . G 5 HOH B 30 80 136 HOH HOH . G 5 HOH B 31 81 137 HOH HOH . G 5 HOH B 32 82 138 HOH HOH . G 5 HOH B 33 83 141 HOH HOH . G 5 HOH B 34 84 142 HOH HOH . G 5 HOH B 35 85 148 HOH HOH . G 5 HOH B 36 86 158 HOH HOH . G 5 HOH B 37 87 162 HOH HOH . G 5 HOH B 38 88 163 HOH HOH . G 5 HOH B 39 89 164 HOH HOH . G 5 HOH B 40 90 174 HOH HOH . G 5 HOH B 41 91 178 HOH HOH . G 5 HOH B 42 92 179 HOH HOH . G 5 HOH B 43 93 182 HOH HOH . G 5 HOH B 44 94 187 HOH HOH . G 5 HOH B 45 95 200 HOH HOH . G 5 HOH B 46 96 202 HOH HOH . G 5 HOH B 47 97 209 HOH HOH . G 5 HOH B 48 98 213 HOH HOH . G 5 HOH B 49 99 221 HOH HOH . G 5 HOH B 50 100 223 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 38.37 _atom_site.Cartn_y 0.944 _atom_site.Cartn_z 34.126 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.01 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 902 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #