data_2PR8 # _model_server_result.job_id zYuVBAj5H7MA20TG-Jt_kA _model_server_result.datetime_utc '2024-11-13 21:16:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2pr8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 2PR8 # _exptl.entry_id 2PR8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2PR8 _cell.length_a 71.62 _cell.length_b 85.37 _cell.length_c 150.41 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PR8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 2PR8 _atom_sites.fract_transf_matrix[1][1] 0.013963 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011714 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006648 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EPE A 1 500 500 EPE EPE . D 2 EPE B 1 500 500 EPE EPE . E 3 HOH A 1 501 3 HOH HOH . E 3 HOH A 2 502 5 HOH HOH . E 3 HOH A 3 503 6 HOH HOH . E 3 HOH A 4 504 7 HOH HOH . E 3 HOH A 5 505 9 HOH HOH . E 3 HOH A 6 506 10 HOH HOH . E 3 HOH A 7 507 11 HOH HOH . E 3 HOH A 8 508 12 HOH HOH . E 3 HOH A 9 509 13 HOH HOH . E 3 HOH A 10 510 17 HOH HOH . E 3 HOH A 11 511 27 HOH HOH . E 3 HOH A 12 512 30 HOH HOH . E 3 HOH A 13 513 33 HOH HOH . E 3 HOH A 14 514 35 HOH HOH . E 3 HOH A 15 515 37 HOH HOH . E 3 HOH A 16 516 40 HOH HOH . E 3 HOH A 17 517 42 HOH HOH . E 3 HOH A 18 518 43 HOH HOH . E 3 HOH A 19 519 44 HOH HOH . E 3 HOH A 20 520 46 HOH HOH . E 3 HOH A 21 521 50 HOH HOH . E 3 HOH A 22 522 52 HOH HOH . E 3 HOH A 23 523 55 HOH HOH . E 3 HOH A 24 524 57 HOH HOH . E 3 HOH A 25 525 61 HOH HOH . E 3 HOH A 26 526 62 HOH HOH . E 3 HOH A 27 527 63 HOH HOH . E 3 HOH A 28 528 64 HOH HOH . E 3 HOH A 29 529 66 HOH HOH . E 3 HOH A 30 530 67 HOH HOH . E 3 HOH A 31 531 68 HOH HOH . E 3 HOH A 32 532 69 HOH HOH . E 3 HOH A 33 533 70 HOH HOH . E 3 HOH A 34 534 73 HOH HOH . E 3 HOH A 35 535 74 HOH HOH . E 3 HOH A 36 536 75 HOH HOH . E 3 HOH A 37 537 77 HOH HOH . E 3 HOH A 38 538 80 HOH HOH . E 3 HOH A 39 539 83 HOH HOH . E 3 HOH A 40 540 84 HOH HOH . E 3 HOH A 41 541 85 HOH HOH . E 3 HOH A 42 542 86 HOH HOH . E 3 HOH A 43 543 87 HOH HOH . E 3 HOH A 44 544 88 HOH HOH . E 3 HOH A 45 545 92 HOH HOH . E 3 HOH A 46 546 96 HOH HOH . E 3 HOH A 47 547 97 HOH HOH . E 3 HOH A 48 548 102 HOH HOH . E 3 HOH A 49 549 107 HOH HOH . E 3 HOH A 50 550 109 HOH HOH . E 3 HOH A 51 551 110 HOH HOH . E 3 HOH A 52 552 111 HOH HOH . E 3 HOH A 53 553 112 HOH HOH . E 3 HOH A 54 554 113 HOH HOH . E 3 HOH A 55 555 116 HOH HOH . E 3 HOH A 56 556 119 HOH HOH . E 3 HOH A 57 557 122 HOH HOH . E 3 HOH A 58 558 128 HOH HOH . E 3 HOH A 59 559 130 HOH HOH . E 3 HOH A 60 560 131 HOH HOH . E 3 HOH A 61 561 134 HOH HOH . E 3 HOH A 62 562 135 HOH HOH . E 3 HOH A 63 563 136 HOH HOH . E 3 HOH A 64 564 137 HOH HOH . E 3 HOH A 65 565 138 HOH HOH . E 3 HOH A 66 566 142 HOH HOH . E 3 HOH A 67 567 145 HOH HOH . E 3 HOH A 68 568 147 HOH HOH . E 3 HOH A 69 569 150 HOH HOH . E 3 HOH A 70 570 151 HOH HOH . E 3 HOH A 71 571 155 HOH HOH . E 3 HOH A 72 572 157 HOH HOH . E 3 HOH A 73 573 163 HOH HOH . E 3 HOH A 74 574 164 HOH HOH . E 3 HOH A 75 575 168 HOH HOH . E 3 HOH A 76 576 169 HOH HOH . E 3 HOH A 77 577 171 HOH HOH . E 3 HOH A 78 578 172 HOH HOH . E 3 HOH A 79 579 173 HOH HOH . E 3 HOH A 80 580 176 HOH HOH . E 3 HOH A 81 581 177 HOH HOH . E 3 HOH A 82 582 179 HOH HOH . E 3 HOH A 83 583 181 HOH HOH . E 3 HOH A 84 584 182 HOH HOH . E 3 HOH A 85 585 185 HOH HOH . E 3 HOH A 86 586 186 HOH HOH . E 3 HOH A 87 587 193 HOH HOH . E 3 HOH A 88 588 194 HOH HOH . E 3 HOH A 89 589 196 HOH HOH . E 3 HOH A 90 590 198 HOH HOH . E 3 HOH A 91 591 201 HOH HOH . E 3 HOH A 92 592 202 HOH HOH . E 3 HOH A 93 593 205 HOH HOH . E 3 HOH A 94 594 208 HOH HOH . E 3 HOH A 95 595 210 HOH HOH . E 3 HOH A 96 596 215 HOH HOH . E 3 HOH A 97 597 216 HOH HOH . E 3 HOH A 98 598 223 HOH HOH . E 3 HOH A 99 599 226 HOH HOH . F 3 HOH B 1 501 2 HOH HOH . F 3 HOH B 2 502 4 HOH HOH . F 3 HOH B 3 503 8 HOH HOH . F 3 HOH B 4 504 14 HOH HOH . F 3 HOH B 5 505 15 HOH HOH . F 3 HOH B 6 506 16 HOH HOH . F 3 HOH B 7 507 18 HOH HOH . F 3 HOH B 8 508 24 HOH HOH . F 3 HOH B 9 509 25 HOH HOH . F 3 HOH B 10 510 26 HOH HOH . F 3 HOH B 11 511 31 HOH HOH . F 3 HOH B 12 512 32 HOH HOH . F 3 HOH B 13 513 34 HOH HOH . F 3 HOH B 14 514 36 HOH HOH . F 3 HOH B 15 515 39 HOH HOH . F 3 HOH B 16 516 41 HOH HOH . F 3 HOH B 17 517 45 HOH HOH . F 3 HOH B 18 518 47 HOH HOH . F 3 HOH B 19 519 48 HOH HOH . F 3 HOH B 20 520 49 HOH HOH . F 3 HOH B 21 521 51 HOH HOH . F 3 HOH B 22 522 53 HOH HOH . F 3 HOH B 23 523 56 HOH HOH . F 3 HOH B 24 524 59 HOH HOH . F 3 HOH B 25 525 78 HOH HOH . F 3 HOH B 26 526 79 HOH HOH . F 3 HOH B 27 527 89 HOH HOH . F 3 HOH B 28 528 90 HOH HOH . F 3 HOH B 29 529 91 HOH HOH . F 3 HOH B 30 530 93 HOH HOH . F 3 HOH B 31 531 95 HOH HOH . F 3 HOH B 32 532 101 HOH HOH . F 3 HOH B 33 533 103 HOH HOH . F 3 HOH B 34 534 104 HOH HOH . F 3 HOH B 35 535 105 HOH HOH . F 3 HOH B 36 536 106 HOH HOH . F 3 HOH B 37 537 108 HOH HOH . F 3 HOH B 38 538 114 HOH HOH . F 3 HOH B 39 539 115 HOH HOH . F 3 HOH B 40 540 117 HOH HOH . F 3 HOH B 41 541 118 HOH HOH . F 3 HOH B 42 542 120 HOH HOH . F 3 HOH B 43 543 121 HOH HOH . F 3 HOH B 44 544 123 HOH HOH . F 3 HOH B 45 545 124 HOH HOH . F 3 HOH B 46 546 125 HOH HOH . F 3 HOH B 47 547 126 HOH HOH . F 3 HOH B 48 548 127 HOH HOH . F 3 HOH B 49 549 129 HOH HOH . F 3 HOH B 50 550 132 HOH HOH . F 3 HOH B 51 551 133 HOH HOH . F 3 HOH B 52 552 139 HOH HOH . F 3 HOH B 53 553 140 HOH HOH . F 3 HOH B 54 554 141 HOH HOH . F 3 HOH B 55 555 143 HOH HOH . F 3 HOH B 56 556 144 HOH HOH . F 3 HOH B 57 557 146 HOH HOH . F 3 HOH B 58 558 148 HOH HOH . F 3 HOH B 59 559 149 HOH HOH . F 3 HOH B 60 560 152 HOH HOH . F 3 HOH B 61 561 153 HOH HOH . F 3 HOH B 62 562 154 HOH HOH . F 3 HOH B 63 563 156 HOH HOH . F 3 HOH B 64 564 158 HOH HOH . F 3 HOH B 65 565 159 HOH HOH . F 3 HOH B 66 566 160 HOH HOH . F 3 HOH B 67 567 161 HOH HOH . F 3 HOH B 68 568 162 HOH HOH . F 3 HOH B 69 569 165 HOH HOH . F 3 HOH B 70 570 166 HOH HOH . F 3 HOH B 71 571 167 HOH HOH . F 3 HOH B 72 572 170 HOH HOH . F 3 HOH B 73 573 174 HOH HOH . F 3 HOH B 74 574 175 HOH HOH . F 3 HOH B 75 575 178 HOH HOH . F 3 HOH B 76 576 180 HOH HOH . F 3 HOH B 77 577 183 HOH HOH . F 3 HOH B 78 578 184 HOH HOH . F 3 HOH B 79 579 187 HOH HOH . F 3 HOH B 80 580 188 HOH HOH . F 3 HOH B 81 581 189 HOH HOH . F 3 HOH B 82 582 190 HOH HOH . F 3 HOH B 83 583 191 HOH HOH . F 3 HOH B 84 584 192 HOH HOH . F 3 HOH B 85 585 195 HOH HOH . F 3 HOH B 86 586 197 HOH HOH . F 3 HOH B 87 587 199 HOH HOH . F 3 HOH B 88 588 200 HOH HOH . F 3 HOH B 89 589 203 HOH HOH . F 3 HOH B 90 590 204 HOH HOH . F 3 HOH B 91 591 206 HOH HOH . F 3 HOH B 92 592 207 HOH HOH . F 3 HOH B 93 593 209 HOH HOH . F 3 HOH B 94 594 211 HOH HOH . F 3 HOH B 95 595 212 HOH HOH . F 3 HOH B 96 596 213 HOH HOH . F 3 HOH B 97 597 214 HOH HOH . F 3 HOH B 98 598 217 HOH HOH . F 3 HOH B 99 599 218 HOH HOH . F 3 HOH B 100 600 219 HOH HOH . F 3 HOH B 101 601 220 HOH HOH . F 3 HOH B 102 602 221 HOH HOH . F 3 HOH B 103 603 222 HOH HOH . F 3 HOH B 104 604 224 HOH HOH . F 3 HOH B 105 605 225 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . C 2 13.074 -6.824 -21.153 1 24.14 ? N1 EPE 500 A 1 HETATM 2 C C2 EPE . . . C 2 12.795 -8.27 -21.334 1 21.67 ? C2 EPE 500 A 1 HETATM 3 C C3 EPE . . . C 2 11.278 -8.432 -21.679 1 22.24 ? C3 EPE 500 A 1 HETATM 4 N N4 EPE . . . C 2 10.845 -7.557 -22.824 1 24.67 ? N4 EPE 500 A 1 HETATM 5 C C5 EPE . . . C 2 11.159 -6.172 -22.488 1 19.59 ? C5 EPE 500 A 1 HETATM 6 C C6 EPE . . . C 2 12.66 -6.074 -22.377 1 22.05 ? C6 EPE 500 A 1 HETATM 7 C C7 EPE . . . C 2 9.36 -7.681 -23.131 1 26.85 ? C7 EPE 500 A 1 HETATM 8 C C8 EPE . . . C 2 9.006 -9.149 -23.44 1 27.86 ? C8 EPE 500 A 1 HETATM 9 O O8 EPE . . . C 2 7.776 -9.28 -24.224 1 37.94 ? O8 EPE 500 A 1 HETATM 10 C C9 EPE . . . C 2 14.47 -6.471 -20.809 1 25.26 ? C9 EPE 500 A 1 HETATM 11 C C10 EPE . . . C 2 15.336 -7.658 -20.98 1 27.79 ? C10 EPE 500 A 1 HETATM 12 S S EPE . . . C 2 17.006 -7.481 -20.338 1 28.44 ? S EPE 500 A 1 HETATM 13 O O1S EPE . . . C 2 17.912 -8.134 -21.255 1 27.68 ? O1S EPE 500 A 1 HETATM 14 O O2S EPE . . . C 2 17.393 -6.032 -20.242 1 28.89 ? O2S EPE 500 A 1 HETATM 15 O O3S EPE . . . C 2 17.058 -8.116 -19.007 1 28.57 ? O3S EPE 500 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #