data_2PS9 # _model_server_result.job_id CuJ7eaPDzLDEYXHW4ndCTw _model_server_result.datetime_utc '2025-04-15 23:35:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ps9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 2PS9 # _exptl.entry_id 2PS9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2PS9 _cell.length_a 91.068 _cell.length_b 78.015 _cell.length_c 85.894 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PS9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 226 A CYS 252 1_555 A SG CYS 280 A CYS 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? disulf ? disulf2 B SG CYS 226 B CYS 252 1_555 B SG CYS 280 B CYS 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc1 A OE1 GLU 33 A GLU 59 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc2 A NE2 HIS 34 A HIS 60 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc3 A NE2 HIS 117 A HIS 143 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc4 A NE2 HIS 181 A HIS 207 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? metalc ? metalc5 B OE1 GLU 33 B GLU 59 1_555 D CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc6 B NE2 HIS 34 B HIS 60 1_555 D CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc7 B NE2 HIS 117 B HIS 143 1_555 D CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc8 B NE2 HIS 181 B HIS 207 1_555 D CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2PS9 _atom_sites.fract_transf_matrix[1][1] 0.010981 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012818 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011642 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO A 1 402 402 CO CO . D 2 CO B 1 401 401 CO CO . E 3 HOH A 1 403 1 HOH HOH . E 3 HOH A 2 404 2 HOH HOH . E 3 HOH A 3 405 3 HOH HOH . E 3 HOH A 4 406 5 HOH HOH . E 3 HOH A 5 407 7 HOH HOH . E 3 HOH A 6 408 8 HOH HOH . E 3 HOH A 7 409 9 HOH HOH . E 3 HOH A 8 410 11 HOH HOH . E 3 HOH A 9 411 12 HOH HOH . E 3 HOH A 10 412 13 HOH HOH . E 3 HOH A 11 413 14 HOH HOH . E 3 HOH A 12 414 17 HOH HOH . E 3 HOH A 13 415 18 HOH HOH . E 3 HOH A 14 416 19 HOH HOH . E 3 HOH A 15 417 20 HOH HOH . E 3 HOH A 16 418 22 HOH HOH . E 3 HOH A 17 419 24 HOH HOH . E 3 HOH A 18 420 25 HOH HOH . E 3 HOH A 19 421 26 HOH HOH . E 3 HOH A 20 422 28 HOH HOH . E 3 HOH A 21 423 29 HOH HOH . E 3 HOH A 22 424 32 HOH HOH . E 3 HOH A 23 425 33 HOH HOH . E 3 HOH A 24 426 34 HOH HOH . E 3 HOH A 25 427 35 HOH HOH . E 3 HOH A 26 428 36 HOH HOH . E 3 HOH A 27 429 38 HOH HOH . E 3 HOH A 28 430 39 HOH HOH . E 3 HOH A 29 431 40 HOH HOH . E 3 HOH A 30 432 41 HOH HOH . E 3 HOH A 31 433 42 HOH HOH . E 3 HOH A 32 434 43 HOH HOH . E 3 HOH A 33 435 44 HOH HOH . E 3 HOH A 34 436 47 HOH HOH . E 3 HOH A 35 437 49 HOH HOH . E 3 HOH A 36 438 50 HOH HOH . E 3 HOH A 37 439 51 HOH HOH . E 3 HOH A 38 440 54 HOH HOH . E 3 HOH A 39 441 58 HOH HOH . E 3 HOH A 40 442 59 HOH HOH . E 3 HOH A 41 443 61 HOH HOH . E 3 HOH A 42 444 63 HOH HOH . E 3 HOH A 43 445 64 HOH HOH . E 3 HOH A 44 446 65 HOH HOH . E 3 HOH A 45 447 67 HOH HOH . E 3 HOH A 46 448 68 HOH HOH . E 3 HOH A 47 449 69 HOH HOH . E 3 HOH A 48 450 77 HOH HOH . E 3 HOH A 49 451 78 HOH HOH . E 3 HOH A 50 452 82 HOH HOH . E 3 HOH A 51 453 83 HOH HOH . E 3 HOH A 52 454 84 HOH HOH . E 3 HOH A 53 455 85 HOH HOH . E 3 HOH A 54 456 86 HOH HOH . E 3 HOH A 55 457 87 HOH HOH . E 3 HOH A 56 458 89 HOH HOH . E 3 HOH A 57 459 90 HOH HOH . E 3 HOH A 58 460 91 HOH HOH . E 3 HOH A 59 461 92 HOH HOH . E 3 HOH A 60 462 94 HOH HOH . E 3 HOH A 61 463 96 HOH HOH . E 3 HOH A 62 464 98 HOH HOH . E 3 HOH A 63 465 99 HOH HOH . E 3 HOH A 64 466 100 HOH HOH . E 3 HOH A 65 467 102 HOH HOH . E 3 HOH A 66 468 103 HOH HOH . E 3 HOH A 67 469 104 HOH HOH . E 3 HOH A 68 470 105 HOH HOH . E 3 HOH A 69 471 106 HOH HOH . E 3 HOH A 70 472 107 HOH HOH . E 3 HOH A 71 473 109 HOH HOH . E 3 HOH A 72 474 113 HOH HOH . E 3 HOH A 73 475 116 HOH HOH . E 3 HOH A 74 476 117 HOH HOH . E 3 HOH A 75 477 121 HOH HOH . E 3 HOH A 76 478 126 HOH HOH . E 3 HOH A 77 479 127 HOH HOH . E 3 HOH A 78 480 128 HOH HOH . E 3 HOH A 79 481 129 HOH HOH . E 3 HOH A 80 482 131 HOH HOH . E 3 HOH A 81 483 132 HOH HOH . E 3 HOH A 82 484 133 HOH HOH . E 3 HOH A 83 485 135 HOH HOH . E 3 HOH A 84 486 140 HOH HOH . E 3 HOH A 85 487 141 HOH HOH . E 3 HOH A 86 488 143 HOH HOH . E 3 HOH A 87 489 144 HOH HOH . E 3 HOH A 88 490 145 HOH HOH . E 3 HOH A 89 491 146 HOH HOH . E 3 HOH A 90 492 147 HOH HOH . E 3 HOH A 91 493 148 HOH HOH . E 3 HOH A 92 494 149 HOH HOH . E 3 HOH A 93 495 150 HOH HOH . E 3 HOH A 94 496 151 HOH HOH . E 3 HOH A 95 497 153 HOH HOH . E 3 HOH A 96 498 155 HOH HOH . E 3 HOH A 97 499 161 HOH HOH . E 3 HOH A 98 500 162 HOH HOH . E 3 HOH A 99 501 165 HOH HOH . E 3 HOH A 100 502 166 HOH HOH . E 3 HOH A 101 503 167 HOH HOH . E 3 HOH A 102 504 170 HOH HOH . E 3 HOH A 103 505 171 HOH HOH . E 3 HOH A 104 506 175 HOH HOH . E 3 HOH A 105 507 176 HOH HOH . E 3 HOH A 106 508 177 HOH HOH . E 3 HOH A 107 509 179 HOH HOH . E 3 HOH A 108 510 181 HOH HOH . E 3 HOH A 109 511 183 HOH HOH . E 3 HOH A 110 512 186 HOH HOH . E 3 HOH A 111 513 187 HOH HOH . E 3 HOH A 112 514 190 HOH HOH . E 3 HOH A 113 515 193 HOH HOH . E 3 HOH A 114 516 194 HOH HOH . E 3 HOH A 115 517 195 HOH HOH . E 3 HOH A 116 518 197 HOH HOH . E 3 HOH A 117 519 200 HOH HOH . E 3 HOH A 118 520 202 HOH HOH . E 3 HOH A 119 521 206 HOH HOH . E 3 HOH A 120 522 207 HOH HOH . E 3 HOH A 121 523 208 HOH HOH . E 3 HOH A 122 524 209 HOH HOH . E 3 HOH A 123 525 210 HOH HOH . E 3 HOH A 124 526 211 HOH HOH . E 3 HOH A 125 527 212 HOH HOH . E 3 HOH A 126 528 214 HOH HOH . E 3 HOH A 127 529 216 HOH HOH . E 3 HOH A 128 530 217 HOH HOH . E 3 HOH A 129 531 218 HOH HOH . E 3 HOH A 130 532 222 HOH HOH . E 3 HOH A 131 533 228 HOH HOH . E 3 HOH A 132 534 230 HOH HOH . E 3 HOH A 133 535 231 HOH HOH . E 3 HOH A 134 536 233 HOH HOH . E 3 HOH A 135 537 234 HOH HOH . E 3 HOH A 136 538 235 HOH HOH . E 3 HOH A 137 539 237 HOH HOH . E 3 HOH A 138 540 238 HOH HOH . E 3 HOH A 139 541 244 HOH HOH . E 3 HOH A 140 542 249 HOH HOH . E 3 HOH A 141 543 250 HOH HOH . E 3 HOH A 142 544 254 HOH HOH . E 3 HOH A 143 545 259 HOH HOH . E 3 HOH A 144 546 263 HOH HOH . E 3 HOH A 145 547 266 HOH HOH . E 3 HOH A 146 548 267 HOH HOH . E 3 HOH A 147 549 270 HOH HOH . E 3 HOH A 148 550 272 HOH HOH . E 3 HOH A 149 551 273 HOH HOH . E 3 HOH A 150 552 276 HOH HOH . E 3 HOH A 151 553 278 HOH HOH . E 3 HOH A 152 554 279 HOH HOH . E 3 HOH A 153 555 281 HOH HOH . E 3 HOH A 154 556 286 HOH HOH . E 3 HOH A 155 557 287 HOH HOH . E 3 HOH A 156 558 289 HOH HOH . E 3 HOH A 157 559 290 HOH HOH . E 3 HOH A 158 560 292 HOH HOH . E 3 HOH A 159 561 297 HOH HOH . E 3 HOH A 160 562 300 HOH HOH . E 3 HOH A 161 563 301 HOH HOH . E 3 HOH A 162 564 304 HOH HOH . E 3 HOH A 163 565 305 HOH HOH . E 3 HOH A 164 566 307 HOH HOH . E 3 HOH A 165 567 309 HOH HOH . E 3 HOH A 166 568 310 HOH HOH . E 3 HOH A 167 569 311 HOH HOH . E 3 HOH A 168 570 315 HOH HOH . F 3 HOH B 1 402 4 HOH HOH . F 3 HOH B 2 403 6 HOH HOH . F 3 HOH B 3 404 10 HOH HOH . F 3 HOH B 4 405 21 HOH HOH . F 3 HOH B 5 406 30 HOH HOH . F 3 HOH B 6 407 31 HOH HOH . F 3 HOH B 7 408 37 HOH HOH . F 3 HOH B 8 409 46 HOH HOH . F 3 HOH B 9 410 48 HOH HOH . F 3 HOH B 10 411 52 HOH HOH . F 3 HOH B 11 412 53 HOH HOH . F 3 HOH B 12 413 55 HOH HOH . F 3 HOH B 13 414 57 HOH HOH . F 3 HOH B 14 415 60 HOH HOH . F 3 HOH B 15 416 62 HOH HOH . F 3 HOH B 16 417 66 HOH HOH . F 3 HOH B 17 418 70 HOH HOH . F 3 HOH B 18 419 71 HOH HOH . F 3 HOH B 19 420 73 HOH HOH . F 3 HOH B 20 421 74 HOH HOH . F 3 HOH B 21 422 75 HOH HOH . F 3 HOH B 22 423 76 HOH HOH . F 3 HOH B 23 424 79 HOH HOH . F 3 HOH B 24 425 80 HOH HOH . F 3 HOH B 25 426 81 HOH HOH . F 3 HOH B 26 427 88 HOH HOH . F 3 HOH B 27 428 93 HOH HOH . F 3 HOH B 28 429 95 HOH HOH . F 3 HOH B 29 430 97 HOH HOH . F 3 HOH B 30 431 101 HOH HOH . F 3 HOH B 31 432 110 HOH HOH . F 3 HOH B 32 433 111 HOH HOH . F 3 HOH B 33 434 112 HOH HOH . F 3 HOH B 34 435 114 HOH HOH . F 3 HOH B 35 436 115 HOH HOH . F 3 HOH B 36 437 118 HOH HOH . F 3 HOH B 37 438 119 HOH HOH . F 3 HOH B 38 439 120 HOH HOH . F 3 HOH B 39 440 122 HOH HOH . F 3 HOH B 40 441 123 HOH HOH . F 3 HOH B 41 442 124 HOH HOH . F 3 HOH B 42 443 125 HOH HOH . F 3 HOH B 43 444 130 HOH HOH . F 3 HOH B 44 445 134 HOH HOH . F 3 HOH B 45 446 137 HOH HOH . F 3 HOH B 46 447 138 HOH HOH . F 3 HOH B 47 448 139 HOH HOH . F 3 HOH B 48 449 152 HOH HOH . F 3 HOH B 49 450 154 HOH HOH . F 3 HOH B 50 451 156 HOH HOH . F 3 HOH B 51 452 158 HOH HOH . F 3 HOH B 52 453 159 HOH HOH . F 3 HOH B 53 454 160 HOH HOH . F 3 HOH B 54 455 163 HOH HOH . F 3 HOH B 55 456 164 HOH HOH . F 3 HOH B 56 457 168 HOH HOH . F 3 HOH B 57 458 173 HOH HOH . F 3 HOH B 58 459 174 HOH HOH . F 3 HOH B 59 460 178 HOH HOH . F 3 HOH B 60 461 180 HOH HOH . F 3 HOH B 61 462 182 HOH HOH . F 3 HOH B 62 463 184 HOH HOH . F 3 HOH B 63 464 185 HOH HOH . F 3 HOH B 64 465 188 HOH HOH . F 3 HOH B 65 466 191 HOH HOH . F 3 HOH B 66 467 196 HOH HOH . F 3 HOH B 67 468 198 HOH HOH . F 3 HOH B 68 469 199 HOH HOH . F 3 HOH B 69 470 201 HOH HOH . F 3 HOH B 70 471 203 HOH HOH . F 3 HOH B 71 472 204 HOH HOH . F 3 HOH B 72 473 213 HOH HOH . F 3 HOH B 73 474 215 HOH HOH . F 3 HOH B 74 475 220 HOH HOH . F 3 HOH B 75 476 221 HOH HOH . F 3 HOH B 76 477 223 HOH HOH . F 3 HOH B 77 478 224 HOH HOH . F 3 HOH B 78 479 225 HOH HOH . F 3 HOH B 79 480 226 HOH HOH . F 3 HOH B 80 481 227 HOH HOH . F 3 HOH B 81 482 229 HOH HOH . F 3 HOH B 82 483 232 HOH HOH . F 3 HOH B 83 484 239 HOH HOH . F 3 HOH B 84 485 241 HOH HOH . F 3 HOH B 85 486 242 HOH HOH . F 3 HOH B 86 487 245 HOH HOH . F 3 HOH B 87 488 247 HOH HOH . F 3 HOH B 88 489 248 HOH HOH . F 3 HOH B 89 490 251 HOH HOH . F 3 HOH B 90 491 252 HOH HOH . F 3 HOH B 91 492 253 HOH HOH . F 3 HOH B 92 493 255 HOH HOH . F 3 HOH B 93 494 256 HOH HOH . F 3 HOH B 94 495 257 HOH HOH . F 3 HOH B 95 496 260 HOH HOH . F 3 HOH B 96 497 261 HOH HOH . F 3 HOH B 97 498 262 HOH HOH . F 3 HOH B 98 499 264 HOH HOH . F 3 HOH B 99 500 265 HOH HOH . F 3 HOH B 100 501 268 HOH HOH . F 3 HOH B 101 502 271 HOH HOH . F 3 HOH B 102 503 274 HOH HOH . F 3 HOH B 103 504 275 HOH HOH . F 3 HOH B 104 505 277 HOH HOH . F 3 HOH B 105 506 280 HOH HOH . F 3 HOH B 106 507 282 HOH HOH . F 3 HOH B 107 508 283 HOH HOH . F 3 HOH B 108 509 284 HOH HOH . F 3 HOH B 109 510 288 HOH HOH . F 3 HOH B 110 511 291 HOH HOH . F 3 HOH B 111 512 293 HOH HOH . F 3 HOH B 112 513 294 HOH HOH . F 3 HOH B 113 514 295 HOH HOH . F 3 HOH B 114 515 296 HOH HOH . F 3 HOH B 115 516 298 HOH HOH . F 3 HOH B 116 517 299 HOH HOH . F 3 HOH B 117 518 302 HOH HOH . F 3 HOH B 118 519 303 HOH HOH . F 3 HOH B 119 520 306 HOH HOH . F 3 HOH B 120 521 308 HOH HOH . F 3 HOH B 121 522 312 HOH HOH . F 3 HOH B 122 523 313 HOH HOH . F 3 HOH B 123 524 314 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 27.12 _atom_site.Cartn_y 16.688 _atom_site.Cartn_z 36.375 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.49 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 162 _model_server_stats.parse_time_ms 120 _model_server_stats.create_model_time_ms 146 _model_server_stats.query_time_ms 478 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #