data_2PSS
#
_model_server_result.job_id            WF9FxOlaKwOi2lGFOdqxqA 
_model_server_result.datetime_utc      '2024-11-22 10:54:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2pss 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":601}' 
#
_entry.id    2PSS 
#
_exptl.entry_id    2PSS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.07 
_cell.angle_gamma         90 
_cell.entry_id            2PSS 
_cell.length_a            195.63 
_cell.length_b            134.18 
_cell.length_c            48.42 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2PSS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,J 1 1,2 
B,C,F,G,H,I,K,L 2 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 H N N 
? 3 I N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 169 n n 
C1 C2 GOL sing 170 n n 
C1 H11 GOL sing 171 n n 
C1 H12 GOL sing 172 n n 
O1 HO1 GOL sing 173 n n 
C2 O2 GOL sing 174 n n 
C2 C3 GOL sing 175 n n 
C2 H2 GOL sing 176 n n 
O2 HO2 GOL sing 177 n n 
C3 O3 GOL sing 178 n n 
C3 H31 GOL sing 179 n n 
C3 H32 GOL sing 180 n n 
O3 HO3 GOL sing 181 n n 
#
_atom_sites.entry_id                     2PSS 
_atom_sites.fract_transf_matrix[1][1]    0.005112 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000364 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007453 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020705 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 1PG A 1 701 701 1PG 1PG . 
E 3 GOL A 1 603 603 GOL GOL . 
F 4 SO4 B 1 604 604 SO4 SO4 . 
G 2 1PG B 1 702 702 1PG 1PG . 
H 3 GOL B 1 601 601 GOL GOL . 
I 3 GOL C 1 602 602 GOL GOL . 
J 5 HOH A 1 702 5 HOH HOH . 
J 5 HOH A 2 703 6 HOH HOH . 
J 5 HOH A 3 704 7 HOH HOH . 
J 5 HOH A 4 705 11 HOH HOH . 
J 5 HOH A 5 706 12 HOH HOH . 
J 5 HOH A 6 707 24 HOH HOH . 
J 5 HOH A 7 708 26 HOH HOH . 
J 5 HOH A 8 709 27 HOH HOH . 
J 5 HOH A 9 710 41 HOH HOH . 
J 5 HOH A 10 711 44 HOH HOH . 
J 5 HOH A 11 712 56 HOH HOH . 
J 5 HOH A 12 713 58 HOH HOH . 
J 5 HOH A 13 714 62 HOH HOH . 
J 5 HOH A 14 715 65 HOH HOH . 
J 5 HOH A 15 716 67 HOH HOH . 
J 5 HOH A 16 717 76 HOH HOH . 
J 5 HOH A 17 718 90 HOH HOH . 
J 5 HOH A 18 719 105 HOH HOH . 
J 5 HOH A 19 720 106 HOH HOH . 
J 5 HOH A 20 721 115 HOH HOH . 
J 5 HOH A 21 722 126 HOH HOH . 
J 5 HOH A 22 723 128 HOH HOH . 
J 5 HOH A 23 724 129 HOH HOH . 
J 5 HOH A 24 725 131 HOH HOH . 
J 5 HOH A 25 726 135 HOH HOH . 
J 5 HOH A 26 727 136 HOH HOH . 
J 5 HOH A 27 728 148 HOH HOH . 
J 5 HOH A 28 729 158 HOH HOH . 
J 5 HOH A 29 730 162 HOH HOH . 
J 5 HOH A 30 731 168 HOH HOH . 
J 5 HOH A 31 732 170 HOH HOH . 
J 5 HOH A 32 733 173 HOH HOH . 
J 5 HOH A 33 734 177 HOH HOH . 
J 5 HOH A 34 735 187 HOH HOH . 
J 5 HOH A 35 736 189 HOH HOH . 
J 5 HOH A 36 737 193 HOH HOH . 
J 5 HOH A 37 738 197 HOH HOH . 
J 5 HOH A 38 739 198 HOH HOH . 
J 5 HOH A 39 740 201 HOH HOH . 
J 5 HOH A 40 741 213 HOH HOH . 
J 5 HOH A 41 742 214 HOH HOH . 
J 5 HOH A 42 743 217 HOH HOH . 
J 5 HOH A 43 744 221 HOH HOH . 
J 5 HOH A 44 745 225 HOH HOH . 
J 5 HOH A 45 746 229 HOH HOH . 
J 5 HOH A 46 747 231 HOH HOH . 
J 5 HOH A 47 748 232 HOH HOH . 
J 5 HOH A 48 749 234 HOH HOH . 
J 5 HOH A 49 750 239 HOH HOH . 
J 5 HOH A 50 751 241 HOH HOH . 
J 5 HOH A 51 752 243 HOH HOH . 
J 5 HOH A 52 753 246 HOH HOH . 
J 5 HOH A 53 754 252 HOH HOH . 
J 5 HOH A 54 755 253 HOH HOH . 
J 5 HOH A 55 756 256 HOH HOH . 
J 5 HOH A 56 757 258 HOH HOH . 
J 5 HOH A 57 758 271 HOH HOH . 
J 5 HOH A 58 759 272 HOH HOH . 
J 5 HOH A 59 760 274 HOH HOH . 
K 5 HOH B 1 703 16 HOH HOH . 
K 5 HOH B 2 704 17 HOH HOH . 
K 5 HOH B 3 705 18 HOH HOH . 
K 5 HOH B 4 706 22 HOH HOH . 
K 5 HOH B 5 707 23 HOH HOH . 
K 5 HOH B 6 708 25 HOH HOH . 
K 5 HOH B 7 709 28 HOH HOH . 
K 5 HOH B 8 710 36 HOH HOH . 
K 5 HOH B 9 711 37 HOH HOH . 
K 5 HOH B 10 712 38 HOH HOH . 
K 5 HOH B 11 713 39 HOH HOH . 
K 5 HOH B 12 714 42 HOH HOH . 
K 5 HOH B 13 715 43 HOH HOH . 
K 5 HOH B 14 716 49 HOH HOH . 
K 5 HOH B 15 717 53 HOH HOH . 
K 5 HOH B 16 718 55 HOH HOH . 
K 5 HOH B 17 719 57 HOH HOH . 
K 5 HOH B 18 720 60 HOH HOH . 
K 5 HOH B 19 721 68 HOH HOH . 
K 5 HOH B 20 722 69 HOH HOH . 
K 5 HOH B 21 723 73 HOH HOH . 
K 5 HOH B 22 724 84 HOH HOH . 
K 5 HOH B 23 725 89 HOH HOH . 
K 5 HOH B 24 726 95 HOH HOH . 
K 5 HOH B 25 727 96 HOH HOH . 
K 5 HOH B 26 728 102 HOH HOH . 
K 5 HOH B 27 729 110 HOH HOH . 
K 5 HOH B 28 730 111 HOH HOH . 
K 5 HOH B 29 731 113 HOH HOH . 
K 5 HOH B 30 732 119 HOH HOH . 
K 5 HOH B 31 733 121 HOH HOH . 
K 5 HOH B 32 734 123 HOH HOH . 
K 5 HOH B 33 735 124 HOH HOH . 
K 5 HOH B 34 736 134 HOH HOH . 
K 5 HOH B 35 737 137 HOH HOH . 
K 5 HOH B 36 738 138 HOH HOH . 
K 5 HOH B 37 739 140 HOH HOH . 
K 5 HOH B 38 740 144 HOH HOH . 
K 5 HOH B 39 741 152 HOH HOH . 
K 5 HOH B 40 742 153 HOH HOH . 
K 5 HOH B 41 743 159 HOH HOH . 
K 5 HOH B 42 744 163 HOH HOH . 
K 5 HOH B 43 745 165 HOH HOH . 
K 5 HOH B 44 746 167 HOH HOH . 
K 5 HOH B 45 747 169 HOH HOH . 
K 5 HOH B 46 748 175 HOH HOH . 
K 5 HOH B 47 749 179 HOH HOH . 
K 5 HOH B 48 750 184 HOH HOH . 
K 5 HOH B 49 751 185 HOH HOH . 
K 5 HOH B 50 752 186 HOH HOH . 
K 5 HOH B 51 753 196 HOH HOH . 
K 5 HOH B 52 754 200 HOH HOH . 
K 5 HOH B 53 755 202 HOH HOH . 
K 5 HOH B 54 756 205 HOH HOH . 
K 5 HOH B 55 757 207 HOH HOH . 
K 5 HOH B 56 758 209 HOH HOH . 
K 5 HOH B 57 759 216 HOH HOH . 
K 5 HOH B 58 760 219 HOH HOH . 
K 5 HOH B 59 761 220 HOH HOH . 
K 5 HOH B 60 762 223 HOH HOH . 
K 5 HOH B 61 763 226 HOH HOH . 
K 5 HOH B 62 764 228 HOH HOH . 
K 5 HOH B 63 765 230 HOH HOH . 
K 5 HOH B 64 766 244 HOH HOH . 
K 5 HOH B 65 767 247 HOH HOH . 
K 5 HOH B 66 768 248 HOH HOH . 
K 5 HOH B 67 769 263 HOH HOH . 
K 5 HOH B 68 770 265 HOH HOH . 
K 5 HOH B 69 771 266 HOH HOH . 
K 5 HOH B 70 772 267 HOH HOH . 
K 5 HOH B 71 773 275 HOH HOH . 
L 5 HOH C 1 603 1 HOH HOH . 
L 5 HOH C 2 604 4 HOH HOH . 
L 5 HOH C 3 605 8 HOH HOH . 
L 5 HOH C 4 606 10 HOH HOH . 
L 5 HOH C 5 607 14 HOH HOH . 
L 5 HOH C 6 608 19 HOH HOH . 
L 5 HOH C 7 609 20 HOH HOH . 
L 5 HOH C 8 610 21 HOH HOH . 
L 5 HOH C 9 611 31 HOH HOH . 
L 5 HOH C 10 612 33 HOH HOH . 
L 5 HOH C 11 613 46 HOH HOH . 
L 5 HOH C 12 614 48 HOH HOH . 
L 5 HOH C 13 615 50 HOH HOH . 
L 5 HOH C 14 616 52 HOH HOH . 
L 5 HOH C 15 617 54 HOH HOH . 
L 5 HOH C 16 618 61 HOH HOH . 
L 5 HOH C 17 619 63 HOH HOH . 
L 5 HOH C 18 620 71 HOH HOH . 
L 5 HOH C 19 621 72 HOH HOH . 
L 5 HOH C 20 622 74 HOH HOH . 
L 5 HOH C 21 623 75 HOH HOH . 
L 5 HOH C 22 624 78 HOH HOH . 
L 5 HOH C 23 625 79 HOH HOH . 
L 5 HOH C 24 626 80 HOH HOH . 
L 5 HOH C 25 627 81 HOH HOH . 
L 5 HOH C 26 628 82 HOH HOH . 
L 5 HOH C 27 629 83 HOH HOH . 
L 5 HOH C 28 630 85 HOH HOH . 
L 5 HOH C 29 631 91 HOH HOH . 
L 5 HOH C 30 632 94 HOH HOH . 
L 5 HOH C 31 633 97 HOH HOH . 
L 5 HOH C 32 634 100 HOH HOH . 
L 5 HOH C 33 635 101 HOH HOH . 
L 5 HOH C 34 636 103 HOH HOH . 
L 5 HOH C 35 637 107 HOH HOH . 
L 5 HOH C 36 638 112 HOH HOH . 
L 5 HOH C 37 639 114 HOH HOH . 
L 5 HOH C 38 640 116 HOH HOH . 
L 5 HOH C 39 641 118 HOH HOH . 
L 5 HOH C 40 642 122 HOH HOH . 
L 5 HOH C 41 643 130 HOH HOH . 
L 5 HOH C 42 644 146 HOH HOH . 
L 5 HOH C 43 645 161 HOH HOH . 
L 5 HOH C 44 646 166 HOH HOH . 
L 5 HOH C 45 647 192 HOH HOH . 
L 5 HOH C 46 648 194 HOH HOH . 
L 5 HOH C 47 649 203 HOH HOH . 
L 5 HOH C 48 650 204 HOH HOH . 
L 5 HOH C 49 651 206 HOH HOH . 
L 5 HOH C 50 652 210 HOH HOH . 
L 5 HOH C 51 653 211 HOH HOH . 
L 5 HOH C 52 654 212 HOH HOH . 
L 5 HOH C 53 655 218 HOH HOH . 
L 5 HOH C 54 656 222 HOH HOH . 
L 5 HOH C 55 657 227 HOH HOH . 
L 5 HOH C 56 658 236 HOH HOH . 
L 5 HOH C 57 659 237 HOH HOH . 
L 5 HOH C 58 660 238 HOH HOH . 
L 5 HOH C 59 661 240 HOH HOH . 
L 5 HOH C 60 662 242 HOH HOH . 
L 5 HOH C 61 663 245 HOH HOH . 
L 5 HOH C 62 664 250 HOH HOH . 
L 5 HOH C 63 665 251 HOH HOH . 
L 5 HOH C 64 666 254 HOH HOH . 
L 5 HOH C 65 667 255 HOH HOH . 
L 5 HOH C 66 668 257 HOH HOH . 
L 5 HOH C 67 669 259 HOH HOH . 
L 5 HOH C 68 670 260 HOH HOH . 
L 5 HOH C 69 671 262 HOH HOH . 
L 5 HOH C 70 672 264 HOH HOH . 
L 5 HOH C 71 673 268 HOH HOH . 
L 5 HOH C 72 674 269 HOH HOH . 
L 5 HOH C 73 675 270 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 3 30.673 15.042 22.186 1 46.81 ? C1 GOL 601 B 1 
HETATM 2 O O1 GOL . . . H 3 29.433 15.198 22.836 1 45.1 ? O1 GOL 601 B 1 
HETATM 3 C C2 GOL . . . H 3 30.485 15.248 20.694 1 48.47 ? C2 GOL 601 B 1 
HETATM 4 O O2 GOL . . . H 3 29.208 14.801 20.304 1 49.92 ? O2 GOL 601 B 1 
HETATM 5 C C3 GOL . . . H 3 31.523 14.445 19.921 1 49.08 ? C3 GOL 601 B 1 
HETATM 6 O O3 GOL . . . H 3 31.542 14.889 18.585 1 50.02 ? O3 GOL 601 B 1 
#
_model_server_stats.io_time_ms              49 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           370 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#