data_2PTC # _model_server_result.job_id Vh_EnSKFeeFadXTsFNnrMA _model_server_result.datetime_utc '2024-10-10 02:33:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ptc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":462}' # _entry.id 2PTC # _exptl.entry_id 2PTC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2PTC _cell.length_a 75.5 _cell.length_b 84.4 _cell.length_c 122.9 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PTC _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA octameric 8 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_575 -x,-y+2,z -1 0 0 0 -1 0 0 0 1 0 168.8 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_575 x,-y+2,-z 1 0 0 0 -1 0 0 0 -1 0 168.8 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 E CYS 22 1_555 A SG CYS 137 E CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 25 E CYS 42 1_555 A SG CYS 41 E CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 A SG CYS 109 E CYS 128 1_555 A SG CYS 210 E CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 A SG CYS 116 E CYS 136 1_555 A SG CYS 183 E CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? disulf ? disulf5 A SG CYS 148 E CYS 168 1_555 A SG CYS 162 E CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf6 A SG CYS 173 E CYS 191 1_555 A SG CYS 197 E CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf7 B SG CYS 5 I CYS 5 1_555 B SG CYS 55 I CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? disulf ? disulf8 B SG CYS 14 I CYS 14 1_555 B SG CYS 38 I CYS 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf9 B SG CYS 30 I CYS 30 1_555 B SG CYS 51 I CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc1 A OE2 GLU 52 E GLU 70 1_555 C CA CA . E CA 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc2 A O ASN 54 E ASN 72 1_555 C CA CA . E CA 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc3 A O VAL 57 E VAL 75 1_555 C CA CA . E CA 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc4 A OE2 GLU 62 E GLU 80 1_555 C CA CA . E CA 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc5 C CA CA . E CA 462 1_555 D O HOH . E HOH 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc6 C CA CA . E CA 462 1_555 D O HOH . E HOH 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2PTC _atom_sites.fract_transf_matrix[1][1] 0.013245 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011848 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008137 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA E 1 462 462 CA CA . D 4 HOH E 1 401 401 HOH HOH . D 4 HOH E 2 402 402 HOH HOH . D 4 HOH E 3 403 403 HOH HOH . D 4 HOH E 4 405 405 HOH HOH . D 4 HOH E 5 406 406 HOH HOH . D 4 HOH E 6 407 407 HOH HOH . D 4 HOH E 7 408 408 HOH HOH . D 4 HOH E 8 409 409 HOH HOH . D 4 HOH E 9 410 410 HOH HOH . D 4 HOH E 10 411 411 HOH HOH . D 4 HOH E 11 412 412 HOH HOH . D 4 HOH E 12 414 414 HOH HOH . D 4 HOH E 13 415 415 HOH HOH . D 4 HOH E 14 416 416 HOH HOH . D 4 HOH E 15 422 422 HOH HOH . D 4 HOH E 16 425 425 HOH HOH . D 4 HOH E 17 426 426 HOH HOH . D 4 HOH E 18 429 429 HOH HOH . D 4 HOH E 19 430 430 HOH HOH . D 4 HOH E 20 431 431 HOH HOH . D 4 HOH E 21 434 434 HOH HOH . D 4 HOH E 22 435 435 HOH HOH . D 4 HOH E 23 436 436 HOH HOH . D 4 HOH E 24 437 437 HOH HOH . D 4 HOH E 25 438 438 HOH HOH . D 4 HOH E 26 439 439 HOH HOH . D 4 HOH E 27 440 440 HOH HOH . D 4 HOH E 28 441 441 HOH HOH . D 4 HOH E 29 442 442 HOH HOH . D 4 HOH E 30 445 445 HOH HOH . D 4 HOH E 31 447 447 HOH HOH . D 4 HOH E 32 448 448 HOH HOH . D 4 HOH E 33 456 456 HOH HOH . D 4 HOH E 34 457 457 HOH HOH . D 4 HOH E 35 463 463 HOH HOH . D 4 HOH E 36 465 465 HOH HOH . D 4 HOH E 37 466 466 HOH HOH . D 4 HOH E 38 469 469 HOH HOH . D 4 HOH E 39 470 470 HOH HOH . D 4 HOH E 40 473 473 HOH HOH . D 4 HOH E 41 475 475 HOH HOH . D 4 HOH E 42 476 476 HOH HOH . D 4 HOH E 43 477 477 HOH HOH . D 4 HOH E 44 479 479 HOH HOH . D 4 HOH E 45 481 481 HOH HOH . D 4 HOH E 46 483 483 HOH HOH . D 4 HOH E 47 487 487 HOH HOH . D 4 HOH E 48 489 489 HOH HOH . D 4 HOH E 49 491 491 HOH HOH . D 4 HOH E 50 495 495 HOH HOH . D 4 HOH E 51 498 498 HOH HOH . D 4 HOH E 52 499 499 HOH HOH . D 4 HOH E 53 502 502 HOH HOH . D 4 HOH E 54 514 514 HOH HOH . D 4 HOH E 55 515 515 HOH HOH . D 4 HOH E 56 516 516 HOH HOH . D 4 HOH E 57 519 519 HOH HOH . D 4 HOH E 58 520 520 HOH HOH . D 4 HOH E 59 522 522 HOH HOH . D 4 HOH E 60 523 523 HOH HOH . D 4 HOH E 61 524 524 HOH HOH . D 4 HOH E 62 526 526 HOH HOH . D 4 HOH E 63 527 527 HOH HOH . D 4 HOH E 64 528 528 HOH HOH . D 4 HOH E 65 529 529 HOH HOH . D 4 HOH E 66 530 530 HOH HOH . D 4 HOH E 67 531 531 HOH HOH . D 4 HOH E 68 534 534 HOH HOH . D 4 HOH E 69 540 540 HOH HOH . D 4 HOH E 70 541 541 HOH HOH . D 4 HOH E 71 542 542 HOH HOH . D 4 HOH E 72 543 543 HOH HOH . D 4 HOH E 73 544 544 HOH HOH . D 4 HOH E 74 545 545 HOH HOH . D 4 HOH E 75 547 547 HOH HOH . D 4 HOH E 76 549 549 HOH HOH . D 4 HOH E 77 550 550 HOH HOH . D 4 HOH E 78 551 551 HOH HOH . D 4 HOH E 79 552 552 HOH HOH . D 4 HOH E 80 554 554 HOH HOH . D 4 HOH E 81 555 555 HOH HOH . D 4 HOH E 82 556 556 HOH HOH . D 4 HOH E 83 559 559 HOH HOH . D 4 HOH E 84 560 560 HOH HOH . D 4 HOH E 85 561 561 HOH HOH . D 4 HOH E 86 562 562 HOH HOH . D 4 HOH E 87 563 563 HOH HOH . D 4 HOH E 88 566 566 HOH HOH . D 4 HOH E 89 570 570 HOH HOH . D 4 HOH E 90 571 571 HOH HOH . D 4 HOH E 91 572 572 HOH HOH . D 4 HOH E 92 573 573 HOH HOH . D 4 HOH E 93 574 574 HOH HOH . D 4 HOH E 94 575 575 HOH HOH . D 4 HOH E 95 576 576 HOH HOH . D 4 HOH E 96 577 577 HOH HOH . D 4 HOH E 97 582 582 HOH HOH . D 4 HOH E 98 583 583 HOH HOH . D 4 HOH E 99 585 585 HOH HOH . D 4 HOH E 100 591 591 HOH HOH . D 4 HOH E 101 592 592 HOH HOH . D 4 HOH E 102 593 593 HOH HOH . D 4 HOH E 103 594 594 HOH HOH . D 4 HOH E 104 595 595 HOH HOH . D 4 HOH E 105 597 597 HOH HOH . D 4 HOH E 106 598 598 HOH HOH . D 4 HOH E 107 599 599 HOH HOH . D 4 HOH E 108 601 601 HOH HOH . D 4 HOH E 109 602 602 HOH HOH . D 4 HOH E 110 603 603 HOH HOH . D 4 HOH E 111 604 604 HOH HOH . D 4 HOH E 112 605 605 HOH HOH . D 4 HOH E 113 606 606 HOH HOH . D 4 HOH E 114 607 607 HOH HOH . D 4 HOH E 115 608 608 HOH HOH . D 4 HOH E 116 609 609 HOH HOH . D 4 HOH E 117 611 611 HOH HOH . D 4 HOH E 118 612 612 HOH HOH . D 4 HOH E 119 613 613 HOH HOH . D 4 HOH E 120 614 614 HOH HOH . D 4 HOH E 121 615 615 HOH HOH . D 4 HOH E 122 616 616 HOH HOH . E 4 HOH I 1 400 400 HOH HOH . E 4 HOH I 2 404 404 HOH HOH . E 4 HOH I 3 413 413 HOH HOH . E 4 HOH I 4 417 417 HOH HOH . E 4 HOH I 5 419 419 HOH HOH . E 4 HOH I 6 420 420 HOH HOH . E 4 HOH I 7 421 421 HOH HOH . E 4 HOH I 8 423 423 HOH HOH . E 4 HOH I 9 427 427 HOH HOH . E 4 HOH I 10 428 428 HOH HOH . E 4 HOH I 11 450 450 HOH HOH . E 4 HOH I 12 452 452 HOH HOH . E 4 HOH I 13 455 455 HOH HOH . E 4 HOH I 14 501 501 HOH HOH . E 4 HOH I 15 503 503 HOH HOH . E 4 HOH I 16 505 505 HOH HOH . E 4 HOH I 17 507 507 HOH HOH . E 4 HOH I 18 508 508 HOH HOH . E 4 HOH I 19 511 511 HOH HOH . E 4 HOH I 20 512 512 HOH HOH . E 4 HOH I 21 532 532 HOH HOH . E 4 HOH I 22 533 533 HOH HOH . E 4 HOH I 23 536 536 HOH HOH . E 4 HOH I 24 537 537 HOH HOH . E 4 HOH I 25 538 538 HOH HOH . E 4 HOH I 26 564 564 HOH HOH . E 4 HOH I 27 565 565 HOH HOH . E 4 HOH I 28 567 567 HOH HOH . E 4 HOH I 29 568 568 HOH HOH . E 4 HOH I 30 569 569 HOH HOH . E 4 HOH I 31 587 587 HOH HOH . E 4 HOH I 32 589 589 HOH HOH . E 4 HOH I 33 590 590 HOH HOH . E 4 HOH I 34 600 600 HOH HOH . E 4 HOH I 35 610 610 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 6.326 _atom_site.Cartn_y 59.439 _atom_site.Cartn_z 2.555 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 14.17 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 462 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #