data_2PVD
#
_model_server_result.job_id            ygbnSmd2gqGDwCf9S3NI4w 
_model_server_result.datetime_utc      '2025-07-18 22:43:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2pvd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    2PVD 
#
_exptl.entry_id    2PVD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2PVD 
_cell.length_a            45.177 
_cell.length_b            45.177 
_cell.length_c            172.73 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2PVD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 45 A CYS 55 1_555 D FE4 SF4 . A SF4 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? 
metalc ? metalc2 A SG CYS 64 A CYS 74 1_555 D FE1 SF4 . A SF4 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc3 A SG CYS 66 A CYS 76 1_555 D FE2 SF4 . A SF4 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc4 A SG CYS 75 A CYS 85 1_555 D FE3 SF4 . A SF4 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 302 n n 
S O2 SO4 doub 303 n n 
S O3 SO4 sing 304 n n 
S O4 SO4 sing 305 n n 
#
_atom_sites.entry_id                     2PVD 
_atom_sites.fract_transf_matrix[1][1]    0.022135 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022135 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005789 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SO4 A 1 201 201 SO4 SO4 . 
D 4 SF4 A 1 202 100 SF4 SF4 . 
E 5 HOH A 1 203 2 HOH HOH . 
E 5 HOH A 2 204 4 HOH HOH . 
E 5 HOH A 3 205 6 HOH HOH . 
E 5 HOH A 4 206 12 HOH HOH . 
E 5 HOH A 5 207 13 HOH HOH . 
E 5 HOH A 6 208 14 HOH HOH . 
E 5 HOH A 7 209 15 HOH HOH . 
E 5 HOH A 8 210 16 HOH HOH . 
E 5 HOH A 9 211 17 HOH HOH . 
E 5 HOH A 10 212 18 HOH HOH . 
E 5 HOH A 11 213 19 HOH HOH . 
E 5 HOH A 12 214 23 HOH HOH . 
E 5 HOH A 13 215 24 HOH HOH . 
E 5 HOH A 14 216 31 HOH HOH . 
E 5 HOH A 15 217 32 HOH HOH . 
E 5 HOH A 16 218 33 HOH HOH . 
E 5 HOH A 17 219 36 HOH HOH . 
E 5 HOH A 18 220 37 HOH HOH . 
E 5 HOH A 19 221 39 HOH HOH . 
E 5 HOH A 20 222 40 HOH HOH . 
E 5 HOH A 21 223 41 HOH HOH . 
E 5 HOH A 22 224 42 HOH HOH . 
E 5 HOH A 23 225 45 HOH HOH . 
E 5 HOH A 24 226 50 HOH HOH . 
E 5 HOH A 25 227 51 HOH HOH . 
E 5 HOH A 26 228 57 HOH HOH . 
E 5 HOH A 27 229 58 HOH HOH . 
E 5 HOH A 28 230 59 HOH HOH . 
E 5 HOH A 29 231 60 HOH HOH . 
E 5 HOH A 30 232 61 HOH HOH . 
E 5 HOH A 31 233 62 HOH HOH . 
E 5 HOH A 32 234 69 HOH HOH . 
E 5 HOH A 33 235 70 HOH HOH . 
E 5 HOH A 34 236 71 HOH HOH . 
E 5 HOH A 35 237 72 HOH HOH . 
E 5 HOH A 36 238 73 HOH HOH . 
E 5 HOH A 37 239 74 HOH HOH . 
E 5 HOH A 38 240 75 HOH HOH . 
E 5 HOH A 39 241 78 HOH HOH . 
F 5 HOH B 1 74 1 HOH HOH . 
F 5 HOH B 2 75 3 HOH HOH . 
F 5 HOH B 3 76 5 HOH HOH . 
F 5 HOH B 4 77 7 HOH HOH . 
F 5 HOH B 5 78 8 HOH HOH . 
F 5 HOH B 6 79 9 HOH HOH . 
F 5 HOH B 7 80 10 HOH HOH . 
F 5 HOH B 8 81 11 HOH HOH . 
F 5 HOH B 9 82 20 HOH HOH . 
F 5 HOH B 10 83 21 HOH HOH . 
F 5 HOH B 11 84 22 HOH HOH . 
F 5 HOH B 12 85 25 HOH HOH . 
F 5 HOH B 13 86 26 HOH HOH . 
F 5 HOH B 14 87 28 HOH HOH . 
F 5 HOH B 15 88 29 HOH HOH . 
F 5 HOH B 16 89 30 HOH HOH . 
F 5 HOH B 17 90 34 HOH HOH . 
F 5 HOH B 18 91 35 HOH HOH . 
F 5 HOH B 19 92 38 HOH HOH . 
F 5 HOH B 20 93 43 HOH HOH . 
F 5 HOH B 21 94 44 HOH HOH . 
F 5 HOH B 22 95 46 HOH HOH . 
F 5 HOH B 23 96 47 HOH HOH . 
F 5 HOH B 24 97 48 HOH HOH . 
F 5 HOH B 25 98 49 HOH HOH . 
F 5 HOH B 26 99 52 HOH HOH . 
F 5 HOH B 27 100 53 HOH HOH . 
F 5 HOH B 28 101 54 HOH HOH . 
F 5 HOH B 29 102 55 HOH HOH . 
F 5 HOH B 30 103 56 HOH HOH . 
F 5 HOH B 31 104 63 HOH HOH . 
F 5 HOH B 32 105 64 HOH HOH . 
F 5 HOH B 33 106 65 HOH HOH . 
F 5 HOH B 34 107 66 HOH HOH . 
F 5 HOH B 35 108 67 HOH HOH . 
F 5 HOH B 36 109 68 HOH HOH . 
F 5 HOH B 37 110 76 HOH HOH . 
F 5 HOH B 38 111 77 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . C 3 25.627 23.058 29.788 1 55.38 ? S SO4 201 A 1 
HETATM 2 O O1 SO4 . . . C 3 24.964 22.079 30.667 1 59.46 ? O1 SO4 201 A 1 
HETATM 3 O O2 SO4 . . . C 3 25.954 24.276 30.551 1 59.16 ? O2 SO4 201 A 1 
HETATM 4 O O3 SO4 . . . C 3 26.863 22.476 29.242 1 58.96 ? O3 SO4 201 A 1 
HETATM 5 O O4 SO4 . . . C 3 24.735 23.403 28.675 1 59.34 ? O4 SO4 201 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           5 
#