data_2PWC # _model_server_result.job_id XVMWS30iqEcMAE2Hy-4zHg _model_server_result.datetime_utc '2024-11-22 02:06:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2pwc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 2PWC # _exptl.entry_id 2PWC _exptl.method 'X-RAY DIFFRACTION' # _entity.details 'synthezised in the lab of Dr. W.E. Diederich' _entity.formula_weight 591.744 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N,N'-(3S,4S)-PYRROLIDINE-3,4-DIYLBIS(4-AMINO-N-BENZYLBENZENESULFONAMIDE)" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2PWC _cell.length_a 57.28 _cell.length_b 85.78 _cell.length_c 46.45 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PWC _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H33 N5 O4 S2' _chem_comp.formula_weight 591.744 _chem_comp.id G3G _chem_comp.mon_nstd_flag . _chem_comp.name "N,N'-(3S,4S)-PYRROLIDINE-3,4-DIYLBIS(4-AMINO-N-BENZYLBENZENESULFONAMIDE)" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C6 G3G doub 83 n y C2 C18 G3G sing 84 n y C2 H2 G3G sing 85 n n C6 C5 G3G sing 86 n y C6 N43 G3G sing 87 n n C5 C20 G3G doub 88 n y C5 H5 G3G sing 89 n n C20 C27 G3G sing 90 n y C20 H20 G3G sing 91 n n C27 S9 G3G sing 92 n n C27 C18 G3G doub 93 n y C18 H18 G3G sing 94 n n S9 O11 G3G doub 95 n n S9 N32 G3G sing 96 n n S9 O40 G3G doub 97 n n N32 C24 G3G sing 98 n n N32 C33 G3G sing 99 n n C33 C34 G3G sing 100 n n C33 H331 G3G sing 101 n n C33 H332 G3G sing 102 n n C34 C35 G3G sing 103 n y C34 C38 G3G doub 104 n y C38 C39 G3G sing 105 n y C38 H38 G3G sing 106 n n C39 C37 G3G doub 107 n y C39 H39 G3G sing 108 n n C37 C36 G3G sing 109 n y C37 H37 G3G sing 110 n n C36 C35 G3G doub 111 n y C36 H36 G3G sing 112 n n C35 H35 G3G sing 113 n n C24 C23 G3G sing 114 n n C24 C25 G3G sing 115 n n C24 H24 G3G sing 116 n n C25 N22 G3G sing 117 n n C25 H251 G3G sing 118 n n C25 H252 G3G sing 119 n n N22 C21 G3G sing 120 n n N22 HN22 G3G sing 121 n n C21 C23 G3G sing 122 n n C21 H211 G3G sing 123 n n C21 H212 G3G sing 124 n n C23 N28 G3G sing 125 n n C23 H23 G3G sing 126 n n N28 S8 G3G sing 127 n n N28 C7 G3G sing 128 n n C7 C12 G3G sing 129 n n C7 H71 G3G sing 130 n n C7 H72 G3G sing 131 n n C12 C13 G3G sing 132 n y C12 C14 G3G doub 133 n y C14 C30 G3G sing 134 n y C14 H14 G3G sing 135 n n C30 C31 G3G doub 136 n y C30 H30 G3G sing 137 n n C31 C29 G3G sing 138 n y C31 H31 G3G sing 139 n n C29 C13 G3G doub 140 n y C29 H29 G3G sing 141 n n C13 H13 G3G sing 142 n n S8 O41 G3G doub 143 n n S8 C26 G3G sing 144 n n S8 O10 G3G doub 145 n n C26 C17 G3G sing 146 n y C26 C19 G3G doub 147 n y C17 C1 G3G doub 148 n y C17 H17 G3G sing 149 n n C1 C4 G3G sing 150 n y C1 H1 G3G sing 151 n n C4 N42 G3G sing 152 n n C4 C3 G3G doub 153 n y C3 C19 G3G sing 154 n y C3 H3 G3G sing 155 n n C19 H19 G3G sing 156 n n N42 H421 G3G sing 157 n n N42 H422 G3G sing 158 n n N43 H431 G3G sing 159 n n N43 H432 G3G sing 160 n n # _atom_sites.entry_id 2PWC _atom_sites.fract_transf_matrix[1][1] 0.017458 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011658 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021529 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 702 702 CL CL . D 3 G3G A 1 501 501 G3G G3G . E 4 GOL A 1 601 601 GOL GOL . F 2 CL B 1 701 701 CL CL . G 2 CL B 1 703 703 CL CL . H 5 HOH A 1 703 3001 HOH HOH . H 5 HOH A 2 704 3002 HOH HOH . H 5 HOH A 3 705 3007 HOH HOH . H 5 HOH A 4 706 3014 HOH HOH . H 5 HOH A 5 707 3015 HOH HOH . H 5 HOH A 6 708 3017 HOH HOH . H 5 HOH A 7 709 3018 HOH HOH . H 5 HOH A 8 710 3020 HOH HOH . H 5 HOH A 9 711 3021 HOH HOH . H 5 HOH A 10 712 3023 HOH HOH . H 5 HOH A 11 713 3025 HOH HOH . H 5 HOH A 12 714 3038 HOH HOH . H 5 HOH A 13 715 3039 HOH HOH . H 5 HOH A 14 716 3040 HOH HOH . H 5 HOH A 15 717 3042 HOH HOH . H 5 HOH A 16 718 3045 HOH HOH . H 5 HOH A 17 719 3046 HOH HOH . H 5 HOH A 18 720 3047 HOH HOH . H 5 HOH A 19 721 3048 HOH HOH . H 5 HOH A 20 722 3049 HOH HOH . H 5 HOH A 21 723 3052 HOH HOH . H 5 HOH A 22 724 3058 HOH HOH . H 5 HOH A 23 725 3060 HOH HOH . H 5 HOH A 24 726 3062 HOH HOH . H 5 HOH A 25 727 3064 HOH HOH . H 5 HOH A 26 728 3066 HOH HOH . H 5 HOH A 27 729 3070 HOH HOH . H 5 HOH A 28 730 3072 HOH HOH . H 5 HOH A 29 731 3074 HOH HOH . H 5 HOH A 30 732 3075 HOH HOH . H 5 HOH A 31 733 3076 HOH HOH . H 5 HOH A 32 734 3077 HOH HOH . H 5 HOH A 33 735 3080 HOH HOH . H 5 HOH A 34 736 3082 HOH HOH . H 5 HOH A 35 737 3087 HOH HOH . H 5 HOH A 36 738 3089 HOH HOH . H 5 HOH A 37 739 3090 HOH HOH . H 5 HOH A 38 740 3091 HOH HOH . H 5 HOH A 39 741 3092 HOH HOH . H 5 HOH A 40 742 3095 HOH HOH . H 5 HOH A 41 743 3097 HOH HOH . H 5 HOH A 42 744 3101 HOH HOH . H 5 HOH A 43 745 3102 HOH HOH . H 5 HOH A 44 746 3104 HOH HOH . H 5 HOH A 45 747 3110 HOH HOH . H 5 HOH A 46 748 3113 HOH HOH . H 5 HOH A 47 749 3115 HOH HOH . H 5 HOH A 48 750 3116 HOH HOH . H 5 HOH A 49 751 3118 HOH HOH . H 5 HOH A 50 752 3121 HOH HOH . H 5 HOH A 51 753 3122 HOH HOH . H 5 HOH A 52 754 3123 HOH HOH . H 5 HOH A 53 755 3124 HOH HOH . H 5 HOH A 54 756 3125 HOH HOH . H 5 HOH A 55 757 3126 HOH HOH . H 5 HOH A 56 758 3127 HOH HOH . H 5 HOH A 57 759 3130 HOH HOH . H 5 HOH A 58 760 3131 HOH HOH . H 5 HOH A 59 761 3132 HOH HOH . H 5 HOH A 60 762 3133 HOH HOH . H 5 HOH A 61 763 3134 HOH HOH . H 5 HOH A 62 764 3135 HOH HOH . H 5 HOH A 63 765 3138 HOH HOH . H 5 HOH A 64 766 3141 HOH HOH . H 5 HOH A 65 767 3142 HOH HOH . H 5 HOH A 66 768 3144 HOH HOH . I 5 HOH B 1 704 3003 HOH HOH . I 5 HOH B 2 705 3004 HOH HOH . I 5 HOH B 3 706 3005 HOH HOH . I 5 HOH B 4 707 3006 HOH HOH . I 5 HOH B 5 708 3008 HOH HOH . I 5 HOH B 6 709 3009 HOH HOH . I 5 HOH B 7 710 3010 HOH HOH . I 5 HOH B 8 711 3011 HOH HOH . I 5 HOH B 9 712 3012 HOH HOH . I 5 HOH B 10 713 3013 HOH HOH . I 5 HOH B 11 714 3016 HOH HOH . I 5 HOH B 12 715 3019 HOH HOH . I 5 HOH B 13 716 3022 HOH HOH . I 5 HOH B 14 717 3024 HOH HOH . I 5 HOH B 15 718 3026 HOH HOH . I 5 HOH B 16 719 3027 HOH HOH . I 5 HOH B 17 720 3028 HOH HOH . I 5 HOH B 18 721 3029 HOH HOH . I 5 HOH B 19 722 3030 HOH HOH . I 5 HOH B 20 723 3031 HOH HOH . I 5 HOH B 21 724 3032 HOH HOH . I 5 HOH B 22 725 3033 HOH HOH . I 5 HOH B 23 726 3034 HOH HOH . I 5 HOH B 24 727 3035 HOH HOH . I 5 HOH B 25 728 3036 HOH HOH . I 5 HOH B 26 729 3037 HOH HOH . I 5 HOH B 27 730 3041 HOH HOH . I 5 HOH B 28 731 3043 HOH HOH . I 5 HOH B 29 732 3044 HOH HOH . I 5 HOH B 30 733 3050 HOH HOH . I 5 HOH B 31 734 3051 HOH HOH . I 5 HOH B 32 735 3053 HOH HOH . I 5 HOH B 33 736 3054 HOH HOH . I 5 HOH B 34 737 3055 HOH HOH . I 5 HOH B 35 738 3056 HOH HOH . I 5 HOH B 36 739 3057 HOH HOH . I 5 HOH B 37 740 3059 HOH HOH . I 5 HOH B 38 741 3061 HOH HOH . I 5 HOH B 39 742 3063 HOH HOH . I 5 HOH B 40 743 3065 HOH HOH . I 5 HOH B 41 744 3067 HOH HOH . I 5 HOH B 42 745 3068 HOH HOH . I 5 HOH B 43 746 3069 HOH HOH . I 5 HOH B 44 747 3071 HOH HOH . I 5 HOH B 45 748 3073 HOH HOH . I 5 HOH B 46 749 3078 HOH HOH . I 5 HOH B 47 750 3079 HOH HOH . I 5 HOH B 48 751 3081 HOH HOH . I 5 HOH B 49 752 3083 HOH HOH . I 5 HOH B 50 753 3084 HOH HOH . I 5 HOH B 51 754 3085 HOH HOH . I 5 HOH B 52 755 3086 HOH HOH . I 5 HOH B 53 756 3088 HOH HOH . I 5 HOH B 54 757 3093 HOH HOH . I 5 HOH B 55 758 3094 HOH HOH . I 5 HOH B 56 759 3096 HOH HOH . I 5 HOH B 57 760 3098 HOH HOH . I 5 HOH B 58 761 3099 HOH HOH . I 5 HOH B 59 762 3100 HOH HOH . I 5 HOH B 60 763 3103 HOH HOH . I 5 HOH B 61 764 3105 HOH HOH . I 5 HOH B 62 765 3106 HOH HOH . I 5 HOH B 63 766 3107 HOH HOH . I 5 HOH B 64 767 3108 HOH HOH . I 5 HOH B 65 768 3109 HOH HOH . I 5 HOH B 66 769 3111 HOH HOH . I 5 HOH B 67 770 3112 HOH HOH . I 5 HOH B 68 771 3114 HOH HOH . I 5 HOH B 69 772 3117 HOH HOH . I 5 HOH B 70 773 3119 HOH HOH . I 5 HOH B 71 774 3120 HOH HOH . I 5 HOH B 72 775 3128 HOH HOH . I 5 HOH B 73 776 3129 HOH HOH . I 5 HOH B 74 777 3136 HOH HOH . I 5 HOH B 75 778 3137 HOH HOH . I 5 HOH B 76 779 3139 HOH HOH . I 5 HOH B 77 780 3140 HOH HOH . I 5 HOH B 78 781 3143 HOH HOH . I 5 HOH B 79 782 3145 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 G3G . . . D 3 -14.393 23.841 -1.717 1 16.38 ? C2 G3G 501 A 1 HETATM 2 C C6 G3G . . . D 3 -13.294 24.211 -2.518 1 13.62 ? C6 G3G 501 A 1 HETATM 3 C C5 G3G . . . D 3 -13.42 24.161 -3.924 1 17.54 ? C5 G3G 501 A 1 HETATM 4 C C20 G3G . . . D 3 -14.597 23.637 -4.515 1 18.63 ? C20 G3G 501 A 1 HETATM 5 C C27 G3G . . . D 3 -15.708 23.26 -3.717 1 20.71 ? C27 G3G 501 A 1 HETATM 6 C C18 G3G . . . D 3 -15.598 23.379 -2.312 1 15.81 ? C18 G3G 501 A 1 HETATM 7 S S9 G3G . . . D 3 -17.177 22.656 -4.533 1 20.78 ? S9 G3G 501 A 1 HETATM 8 O O40 G3G . . . D 3 -18.26 23.064 -3.658 1 22.95 ? O40 G3G 501 A 1 HETATM 9 O O11 G3G . . . D 3 -17.031 22.969 -5.939 1 22.69 ? O11 G3G 501 A 1 HETATM 10 N N32 G3G . . . D 3 -16.873 20.97 -4.235 1 19.58 ? N32 G3G 501 A 1 HETATM 11 C C33 G3G . . . D 3 -17.425 20.389 -2.979 1 18.38 ? C33 G3G 501 A 1 HETATM 12 C C34 G3G . . . D 3 -18.702 19.564 -3.072 1 15.92 ? C34 G3G 501 A 1 HETATM 13 C C38 G3G . . . D 3 -18.841 18.407 -2.246 1 16.92 ? C38 G3G 501 A 1 HETATM 14 C C39 G3G . . . D 3 -20.029 17.633 -2.251 1 19.06 ? C39 G3G 501 A 1 HETATM 15 C C37 G3G . . . D 3 -21.055 17.989 -3.17 1 21.44 ? C37 G3G 501 A 1 HETATM 16 C C36 G3G . . . D 3 -20.884 19.103 -4.045 1 14.83 ? C36 G3G 501 A 1 HETATM 17 C C35 G3G . . . D 3 -19.721 19.918 -3.985 1 16.23 ? C35 G3G 501 A 1 HETATM 18 C C24 G3G . . . D 3 -16.031 20.248 -5.253 1 19.33 ? C24 G3G 501 A 1 HETATM 19 C C25 G3G . . . D 3 -14.639 19.794 -4.732 1 14.2 ? C25 G3G 501 A 1 HETATM 20 N N22 G3G . . . D 3 -14.603 18.31 -4.683 1 14.28 ? N22 G3G 501 A 1 HETATM 21 C C21 G3G . . . D 3 -15.933 17.775 -5.067 1 13.82 ? C21 G3G 501 A 1 HETATM 22 C C23 G3G . . . D 3 -16.706 18.912 -5.775 1 20.38 ? C23 G3G 501 A 1 HETATM 23 N N28 G3G . . . D 3 -16.522 18.833 -7.262 1 27.99 ? N28 G3G 501 A 1 HETATM 24 C C7 G3G . . . D 3 -15.242 18.546 -7.959 1 16.13 ? C7 G3G 501 A 1 HETATM 25 C C12 G3G . . . D 3 -14.404 19.827 -8.122 1 19.94 ? C12 G3G 501 A 1 HETATM 26 C C14 G3G . . . D 3 -13.004 19.808 -7.824 1 18.46 ? C14 G3G 501 A 1 HETATM 27 C C30 G3G . . . D 3 -12.197 20.963 -7.981 1 24.2 ? C30 G3G 501 A 1 HETATM 28 C C31 G3G . . . D 3 -12.818 22.181 -8.399 1 31.01 ? C31 G3G 501 A 1 HETATM 29 C C29 G3G . . . D 3 -14.209 22.21 -8.704 1 30.32 ? C29 G3G 501 A 1 HETATM 30 C C13 G3G . . . D 3 -15.011 21.038 -8.566 1 32.54 ? C13 G3G 501 A 1 HETATM 31 S S8 G3G . . . D 3 -17.869 19.134 -8.235 1 27.69 ? S8 G3G 501 A 1 HETATM 32 C C26 G3G . . . D 3 -18.988 17.782 -8.217 1 23.5 ? C26 G3G 501 A 1 HETATM 33 C C17 G3G . . . D 3 -18.772 16.526 -8.85 1 22.37 ? C17 G3G 501 A 1 HETATM 34 C C1 G3G . . . D 3 -19.744 15.485 -8.79 1 21.21 ? C1 G3G 501 A 1 HETATM 35 C C4 G3G . . . D 3 -20.971 15.684 -8.065 1 29.71 ? C4 G3G 501 A 1 HETATM 36 C C3 G3G . . . D 3 -21.211 16.946 -7.433 1 29.22 ? C3 G3G 501 A 1 HETATM 37 C C19 G3G . . . D 3 -20.213 17.961 -7.491 1 22.33 ? C19 G3G 501 A 1 HETATM 38 O O41 G3G . . . D 3 -17.341 19.272 -9.613 1 25.51 ? O41 G3G 501 A 1 HETATM 39 O O10 G3G . . . D 3 -18.568 20.314 -7.686 1 30.69 ? O10 G3G 501 A 1 HETATM 40 N N42 G3G . . . D 3 -21.924 14.729 -7.983 1 28.57 ? N42 G3G 501 A 1 HETATM 41 N N43 G3G . . . D 3 -12.165 24.69 -1.954 1 16.29 ? N43 G3G 501 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 41 #