data_2PWR # _model_server_result.job_id 3W2xKn1whE4tKFTTVBOKtQ _model_server_result.datetime_utc '2025-06-30 05:04:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2pwr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":601}' # _entry.id 2PWR # _exptl.entry_id 2PWR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2PWR _cell.length_a 56.77 _cell.length_b 84.8 _cell.length_c 46.06 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PWR _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 211 n n C1 C2 GOL sing 212 n n C1 H11 GOL sing 213 n n C1 H12 GOL sing 214 n n O1 HO1 GOL sing 215 n n C2 O2 GOL sing 216 n n C2 C3 GOL sing 217 n n C2 H2 GOL sing 218 n n O2 HO2 GOL sing 219 n n C3 O3 GOL sing 220 n n C3 H31 GOL sing 221 n n C3 H32 GOL sing 222 n n O3 HO3 GOL sing 223 n n # _atom_sites.entry_id 2PWR _atom_sites.fract_transf_matrix[1][1] 0.017614 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011793 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02171 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 702 702 CL CL . D 2 CL B 1 701 701 CL CL . E 2 CL B 1 703 703 CL CL . F 3 G4G B 1 501 501 G4G LIG . G 4 GOL B 1 601 601 GOL GOL . H 5 HOH A 1 703 3001 HOH HOH . H 5 HOH A 2 704 3002 HOH HOH . H 5 HOH A 3 705 3003 HOH HOH . H 5 HOH A 4 706 3004 HOH HOH . H 5 HOH A 5 707 3009 HOH HOH . H 5 HOH A 6 708 3010 HOH HOH . H 5 HOH A 7 709 3012 HOH HOH . H 5 HOH A 8 710 3013 HOH HOH . H 5 HOH A 9 711 3015 HOH HOH . H 5 HOH A 10 712 3021 HOH HOH . H 5 HOH A 11 713 3024 HOH HOH . H 5 HOH A 12 714 3028 HOH HOH . H 5 HOH A 13 715 3030 HOH HOH . H 5 HOH A 14 716 3036 HOH HOH . H 5 HOH A 15 717 3039 HOH HOH . H 5 HOH A 16 718 3041 HOH HOH . H 5 HOH A 17 719 3044 HOH HOH . H 5 HOH A 18 720 3045 HOH HOH . H 5 HOH A 19 721 3046 HOH HOH . H 5 HOH A 20 722 3047 HOH HOH . H 5 HOH A 21 723 3052 HOH HOH . H 5 HOH A 22 724 3053 HOH HOH . H 5 HOH A 23 725 3054 HOH HOH . H 5 HOH A 24 726 3063 HOH HOH . H 5 HOH A 25 727 3069 HOH HOH . H 5 HOH A 26 728 3070 HOH HOH . H 5 HOH A 27 729 3071 HOH HOH . H 5 HOH A 28 730 3075 HOH HOH . H 5 HOH A 29 731 3076 HOH HOH . H 5 HOH A 30 732 3077 HOH HOH . H 5 HOH A 31 733 3078 HOH HOH . H 5 HOH A 32 734 3085 HOH HOH . H 5 HOH A 33 735 3086 HOH HOH . H 5 HOH A 34 736 3089 HOH HOH . H 5 HOH A 35 737 3091 HOH HOH . H 5 HOH A 36 738 3095 HOH HOH . H 5 HOH A 37 739 3101 HOH HOH . H 5 HOH A 38 740 3102 HOH HOH . H 5 HOH A 39 741 3103 HOH HOH . H 5 HOH A 40 742 3105 HOH HOH . H 5 HOH A 41 743 3108 HOH HOH . H 5 HOH A 42 744 3109 HOH HOH . H 5 HOH A 43 745 3112 HOH HOH . H 5 HOH A 44 746 3113 HOH HOH . H 5 HOH A 45 747 3114 HOH HOH . H 5 HOH A 46 748 3115 HOH HOH . H 5 HOH A 47 749 3116 HOH HOH . H 5 HOH A 48 750 3118 HOH HOH . H 5 HOH A 49 751 3121 HOH HOH . H 5 HOH A 50 752 3123 HOH HOH . H 5 HOH A 51 753 3124 HOH HOH . H 5 HOH A 52 754 3133 HOH HOH . H 5 HOH A 53 755 3135 HOH HOH . H 5 HOH A 54 756 3136 HOH HOH . H 5 HOH A 55 757 3137 HOH HOH . H 5 HOH A 56 758 3140 HOH HOH . H 5 HOH A 57 759 3141 HOH HOH . H 5 HOH A 58 760 3144 HOH HOH . H 5 HOH A 59 761 3145 HOH HOH . H 5 HOH A 60 762 3146 HOH HOH . H 5 HOH A 61 763 3148 HOH HOH . H 5 HOH A 62 764 3149 HOH HOH . H 5 HOH A 63 765 3150 HOH HOH . H 5 HOH A 64 766 3151 HOH HOH . H 5 HOH A 65 767 3152 HOH HOH . H 5 HOH A 66 768 3154 HOH HOH . H 5 HOH A 67 769 3156 HOH HOH . H 5 HOH A 68 770 3157 HOH HOH . H 5 HOH A 69 771 3159 HOH HOH . H 5 HOH A 70 772 3164 HOH HOH . H 5 HOH A 71 773 3165 HOH HOH . H 5 HOH A 72 774 3167 HOH HOH . H 5 HOH A 73 775 3169 HOH HOH . H 5 HOH A 74 776 3171 HOH HOH . H 5 HOH A 75 777 3172 HOH HOH . H 5 HOH A 76 778 3173 HOH HOH . H 5 HOH A 77 779 3175 HOH HOH . H 5 HOH A 78 780 3180 HOH HOH . H 5 HOH A 79 781 3182 HOH HOH . I 5 HOH B 1 704 3005 HOH HOH . I 5 HOH B 2 705 3006 HOH HOH . I 5 HOH B 3 706 3007 HOH HOH . I 5 HOH B 4 707 3008 HOH HOH . I 5 HOH B 5 708 3011 HOH HOH . I 5 HOH B 6 709 3014 HOH HOH . I 5 HOH B 7 710 3016 HOH HOH . I 5 HOH B 8 711 3017 HOH HOH . I 5 HOH B 9 712 3018 HOH HOH . I 5 HOH B 10 713 3019 HOH HOH . I 5 HOH B 11 714 3020 HOH HOH . I 5 HOH B 12 715 3022 HOH HOH . I 5 HOH B 13 716 3023 HOH HOH . I 5 HOH B 14 717 3025 HOH HOH . I 5 HOH B 15 718 3026 HOH HOH . I 5 HOH B 16 719 3027 HOH HOH . I 5 HOH B 17 720 3029 HOH HOH . I 5 HOH B 18 721 3031 HOH HOH . I 5 HOH B 19 722 3032 HOH HOH . I 5 HOH B 20 723 3033 HOH HOH . I 5 HOH B 21 724 3034 HOH HOH . I 5 HOH B 22 725 3035 HOH HOH . I 5 HOH B 23 726 3037 HOH HOH . I 5 HOH B 24 727 3038 HOH HOH . I 5 HOH B 25 728 3040 HOH HOH . I 5 HOH B 26 729 3042 HOH HOH . I 5 HOH B 27 730 3043 HOH HOH . I 5 HOH B 28 731 3048 HOH HOH . I 5 HOH B 29 732 3049 HOH HOH . I 5 HOH B 30 733 3050 HOH HOH . I 5 HOH B 31 734 3051 HOH HOH . I 5 HOH B 32 735 3055 HOH HOH . I 5 HOH B 33 736 3056 HOH HOH . I 5 HOH B 34 737 3057 HOH HOH . I 5 HOH B 35 738 3058 HOH HOH . I 5 HOH B 36 739 3059 HOH HOH . I 5 HOH B 37 740 3060 HOH HOH . I 5 HOH B 38 741 3061 HOH HOH . I 5 HOH B 39 742 3062 HOH HOH . I 5 HOH B 40 743 3064 HOH HOH . I 5 HOH B 41 744 3065 HOH HOH . I 5 HOH B 42 745 3066 HOH HOH . I 5 HOH B 43 746 3067 HOH HOH . I 5 HOH B 44 747 3068 HOH HOH . I 5 HOH B 45 748 3072 HOH HOH . I 5 HOH B 46 749 3073 HOH HOH . I 5 HOH B 47 750 3074 HOH HOH . I 5 HOH B 48 751 3079 HOH HOH . I 5 HOH B 49 752 3080 HOH HOH . I 5 HOH B 50 753 3081 HOH HOH . I 5 HOH B 51 754 3082 HOH HOH . I 5 HOH B 52 755 3083 HOH HOH . I 5 HOH B 53 756 3084 HOH HOH . I 5 HOH B 54 757 3087 HOH HOH . I 5 HOH B 55 758 3088 HOH HOH . I 5 HOH B 56 759 3090 HOH HOH . I 5 HOH B 57 760 3092 HOH HOH . I 5 HOH B 58 761 3093 HOH HOH . I 5 HOH B 59 762 3094 HOH HOH . I 5 HOH B 60 763 3096 HOH HOH . I 5 HOH B 61 764 3097 HOH HOH . I 5 HOH B 62 765 3098 HOH HOH . I 5 HOH B 63 766 3099 HOH HOH . I 5 HOH B 64 767 3100 HOH HOH . I 5 HOH B 65 768 3104 HOH HOH . I 5 HOH B 66 769 3106 HOH HOH . I 5 HOH B 67 770 3107 HOH HOH . I 5 HOH B 68 771 3110 HOH HOH . I 5 HOH B 69 772 3111 HOH HOH . I 5 HOH B 70 773 3117 HOH HOH . I 5 HOH B 71 774 3119 HOH HOH . I 5 HOH B 72 775 3120 HOH HOH . I 5 HOH B 73 776 3122 HOH HOH . I 5 HOH B 74 777 3125 HOH HOH . I 5 HOH B 75 778 3126 HOH HOH . I 5 HOH B 76 779 3127 HOH HOH . I 5 HOH B 77 780 3128 HOH HOH . I 5 HOH B 78 781 3129 HOH HOH . I 5 HOH B 79 782 3130 HOH HOH . I 5 HOH B 80 783 3131 HOH HOH . I 5 HOH B 81 784 3132 HOH HOH . I 5 HOH B 82 785 3134 HOH HOH . I 5 HOH B 83 786 3138 HOH HOH . I 5 HOH B 84 787 3139 HOH HOH . I 5 HOH B 85 788 3142 HOH HOH . I 5 HOH B 86 789 3143 HOH HOH . I 5 HOH B 87 790 3147 HOH HOH . I 5 HOH B 88 791 3153 HOH HOH . I 5 HOH B 89 792 3155 HOH HOH . I 5 HOH B 90 793 3158 HOH HOH . I 5 HOH B 91 794 3160 HOH HOH . I 5 HOH B 92 795 3161 HOH HOH . I 5 HOH B 93 796 3162 HOH HOH . I 5 HOH B 94 797 3163 HOH HOH . I 5 HOH B 95 798 3166 HOH HOH . I 5 HOH B 96 799 3168 HOH HOH . I 5 HOH B 97 800 3170 HOH HOH . I 5 HOH B 98 801 3174 HOH HOH . I 5 HOH B 99 802 3176 HOH HOH . I 5 HOH B 100 803 3177 HOH HOH . I 5 HOH B 101 804 3178 HOH HOH . I 5 HOH B 102 805 3179 HOH HOH . I 5 HOH B 103 806 3181 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 4 14.287 -15.354 -39.184 1 16.87 ? C1 GOL 601 B 1 HETATM 2 O O1 GOL . . . G 4 15.685 -15.414 -39.017 1 17.77 ? O1 GOL 601 B 1 HETATM 3 C C2 GOL . . . G 4 13.912 -13.964 -39.747 1 28.94 ? C2 GOL 601 B 1 HETATM 4 O O2 GOL . . . G 4 14.394 -12.971 -38.829 1 28.98 ? O2 GOL 601 B 1 HETATM 5 C C3 GOL . . . G 4 14.593 -13.842 -41.123 1 26.17 ? C3 GOL 601 B 1 HETATM 6 O O3 GOL . . . G 4 14.259 -12.601 -41.743 1 18.92 ? O3 GOL 601 B 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 376 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #