data_2PWV # _model_server_result.job_id tzB9YhO-oXt96YeMYU00tg _model_server_result.datetime_utc '2024-11-29 15:17:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2pwv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":716}' # _entry.id 2PWV # _exptl.entry_id 2PWV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.12 _cell.angle_gamma 90 _cell.entry_id 2PWV _cell.length_a 90.757 _cell.length_b 65.175 _cell.length_c 70.455 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PWV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 318 A CYS 318 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc2 A SG CYS 320 A CYS 320 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc3 A SG CYS 323 A CYS 323 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc4 A ND1 HIS 349 A HIS 349 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2PWV _atom_sites.fract_transf_matrix[1][1] 0.011018 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001181 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015343 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014275 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 400 400 ZN ZN . C 3 PQ0 A 1 500 500 PQ0 PQ0 . D 4 GOL A 1 600 600 GOL GOL . E 4 GOL A 1 703 703 GOL GOL . F 4 GOL A 1 705 705 GOL GOL . G 4 GOL A 1 706 706 GOL GOL . H 4 GOL A 1 716 716 GOL GOL . I 4 GOL A 1 717 717 GOL GOL . J 5 HOH A 1 718 1001 HOH HOH . J 5 HOH A 2 719 1002 HOH HOH . J 5 HOH A 3 720 1003 HOH HOH . J 5 HOH A 4 721 1004 HOH HOH . J 5 HOH A 5 722 1005 HOH HOH . J 5 HOH A 6 723 1006 HOH HOH . J 5 HOH A 7 724 1007 HOH HOH . J 5 HOH A 8 725 1008 HOH HOH . J 5 HOH A 9 726 1009 HOH HOH . J 5 HOH A 10 727 1010 HOH HOH . J 5 HOH A 11 728 1011 HOH HOH . J 5 HOH A 12 729 1012 HOH HOH . J 5 HOH A 13 730 1013 HOH HOH . J 5 HOH A 14 731 1014 HOH HOH . J 5 HOH A 15 732 1015 HOH HOH . J 5 HOH A 16 733 1016 HOH HOH . J 5 HOH A 17 734 1017 HOH HOH . J 5 HOH A 18 735 1018 HOH HOH . J 5 HOH A 19 736 1019 HOH HOH . J 5 HOH A 20 737 1020 HOH HOH . J 5 HOH A 21 738 1021 HOH HOH . J 5 HOH A 22 739 1022 HOH HOH . J 5 HOH A 23 740 1023 HOH HOH . J 5 HOH A 24 741 1024 HOH HOH . J 5 HOH A 25 742 1025 HOH HOH . J 5 HOH A 26 743 1026 HOH HOH . J 5 HOH A 27 744 1027 HOH HOH . J 5 HOH A 28 745 1028 HOH HOH . J 5 HOH A 29 746 1029 HOH HOH . J 5 HOH A 30 747 1030 HOH HOH . J 5 HOH A 31 748 1031 HOH HOH . J 5 HOH A 32 749 1032 HOH HOH . J 5 HOH A 33 750 1033 HOH HOH . J 5 HOH A 34 751 1034 HOH HOH . J 5 HOH A 35 752 1035 HOH HOH . J 5 HOH A 36 753 1036 HOH HOH . J 5 HOH A 37 754 1037 HOH HOH . J 5 HOH A 38 755 1038 HOH HOH . J 5 HOH A 39 756 1039 HOH HOH . J 5 HOH A 40 757 1040 HOH HOH . J 5 HOH A 41 758 1041 HOH HOH . J 5 HOH A 42 759 1042 HOH HOH . J 5 HOH A 43 760 1043 HOH HOH . J 5 HOH A 44 761 1044 HOH HOH . J 5 HOH A 45 762 1045 HOH HOH . J 5 HOH A 46 763 1046 HOH HOH . J 5 HOH A 47 764 1047 HOH HOH . J 5 HOH A 48 765 1048 HOH HOH . J 5 HOH A 49 766 1049 HOH HOH . J 5 HOH A 50 767 1050 HOH HOH . J 5 HOH A 51 768 1051 HOH HOH . J 5 HOH A 52 769 1052 HOH HOH . J 5 HOH A 53 770 1053 HOH HOH . J 5 HOH A 54 771 1054 HOH HOH . J 5 HOH A 55 772 1055 HOH HOH . J 5 HOH A 56 773 1056 HOH HOH . J 5 HOH A 57 774 1057 HOH HOH . J 5 HOH A 58 775 1058 HOH HOH . J 5 HOH A 59 776 1059 HOH HOH . J 5 HOH A 60 777 1060 HOH HOH . J 5 HOH A 61 778 1061 HOH HOH . J 5 HOH A 62 779 1062 HOH HOH . J 5 HOH A 63 780 1063 HOH HOH . J 5 HOH A 64 781 1064 HOH HOH . J 5 HOH A 65 782 1065 HOH HOH . J 5 HOH A 66 783 1066 HOH HOH . J 5 HOH A 67 784 1067 HOH HOH . J 5 HOH A 68 785 1068 HOH HOH . J 5 HOH A 69 786 1069 HOH HOH . J 5 HOH A 70 787 1070 HOH HOH . J 5 HOH A 71 788 1071 HOH HOH . J 5 HOH A 72 789 1072 HOH HOH . J 5 HOH A 73 790 1073 HOH HOH . J 5 HOH A 74 791 1074 HOH HOH . J 5 HOH A 75 792 1075 HOH HOH . J 5 HOH A 76 793 1076 HOH HOH . J 5 HOH A 77 794 1077 HOH HOH . J 5 HOH A 78 795 1078 HOH HOH . J 5 HOH A 79 796 1079 HOH HOH . J 5 HOH A 80 797 1080 HOH HOH . J 5 HOH A 81 798 1081 HOH HOH . J 5 HOH A 82 799 1082 HOH HOH . J 5 HOH A 83 800 1083 HOH HOH . J 5 HOH A 84 801 1084 HOH HOH . J 5 HOH A 85 802 1085 HOH HOH . J 5 HOH A 86 803 1086 HOH HOH . J 5 HOH A 87 804 1087 HOH HOH . J 5 HOH A 88 805 1088 HOH HOH . J 5 HOH A 89 806 1089 HOH HOH . J 5 HOH A 90 807 1090 HOH HOH . J 5 HOH A 91 808 1091 HOH HOH . J 5 HOH A 92 809 1092 HOH HOH . J 5 HOH A 93 810 1093 HOH HOH . J 5 HOH A 94 811 1094 HOH HOH . J 5 HOH A 95 812 1095 HOH HOH . J 5 HOH A 96 813 1096 HOH HOH . J 5 HOH A 97 814 1097 HOH HOH . J 5 HOH A 98 815 1098 HOH HOH . J 5 HOH A 99 816 1099 HOH HOH . J 5 HOH A 100 817 1100 HOH HOH . J 5 HOH A 101 818 1101 HOH HOH . J 5 HOH A 102 819 1102 HOH HOH . J 5 HOH A 103 820 1103 HOH HOH . J 5 HOH A 104 821 1104 HOH HOH . J 5 HOH A 105 822 1105 HOH HOH . J 5 HOH A 106 823 1106 HOH HOH . J 5 HOH A 107 824 1107 HOH HOH . J 5 HOH A 108 825 1108 HOH HOH . J 5 HOH A 109 826 1109 HOH HOH . J 5 HOH A 110 827 1110 HOH HOH . J 5 HOH A 111 828 1111 HOH HOH . J 5 HOH A 112 829 1112 HOH HOH . J 5 HOH A 113 830 1113 HOH HOH . J 5 HOH A 114 831 1114 HOH HOH . J 5 HOH A 115 832 1115 HOH HOH . J 5 HOH A 116 833 1116 HOH HOH . J 5 HOH A 117 834 1117 HOH HOH . J 5 HOH A 118 835 1118 HOH HOH . J 5 HOH A 119 836 1119 HOH HOH . J 5 HOH A 120 837 1120 HOH HOH . J 5 HOH A 121 838 1121 HOH HOH . J 5 HOH A 122 839 1122 HOH HOH . J 5 HOH A 123 840 1123 HOH HOH . J 5 HOH A 124 841 1124 HOH HOH . J 5 HOH A 125 842 1125 HOH HOH . J 5 HOH A 126 843 1126 HOH HOH . J 5 HOH A 127 844 1127 HOH HOH . J 5 HOH A 128 845 1128 HOH HOH . J 5 HOH A 129 846 1129 HOH HOH . J 5 HOH A 130 847 1130 HOH HOH . J 5 HOH A 131 848 1131 HOH HOH . J 5 HOH A 132 849 1132 HOH HOH . J 5 HOH A 133 850 1133 HOH HOH . J 5 HOH A 134 851 1134 HOH HOH . J 5 HOH A 135 852 1135 HOH HOH . J 5 HOH A 136 853 1136 HOH HOH . J 5 HOH A 137 854 1137 HOH HOH . J 5 HOH A 138 855 1138 HOH HOH . J 5 HOH A 139 856 1139 HOH HOH . J 5 HOH A 140 857 1140 HOH HOH . J 5 HOH A 141 858 1141 HOH HOH . J 5 HOH A 142 859 1142 HOH HOH . J 5 HOH A 143 860 1143 HOH HOH . J 5 HOH A 144 861 1144 HOH HOH . J 5 HOH A 145 862 1145 HOH HOH . J 5 HOH A 146 863 1146 HOH HOH . J 5 HOH A 147 864 1147 HOH HOH . J 5 HOH A 148 865 1148 HOH HOH . J 5 HOH A 149 866 1149 HOH HOH . J 5 HOH A 150 867 1150 HOH HOH . J 5 HOH A 151 868 1151 HOH HOH . J 5 HOH A 152 869 1152 HOH HOH . J 5 HOH A 153 870 1153 HOH HOH . J 5 HOH A 154 871 1154 HOH HOH . J 5 HOH A 155 872 1155 HOH HOH . J 5 HOH A 156 873 1156 HOH HOH . J 5 HOH A 157 874 1157 HOH HOH . J 5 HOH A 158 875 1158 HOH HOH . J 5 HOH A 159 876 1159 HOH HOH . J 5 HOH A 160 877 1160 HOH HOH . J 5 HOH A 161 878 1161 HOH HOH . J 5 HOH A 162 879 1162 HOH HOH . J 5 HOH A 163 880 1163 HOH HOH . J 5 HOH A 164 881 1164 HOH HOH . J 5 HOH A 165 882 1165 HOH HOH . J 5 HOH A 166 883 1166 HOH HOH . J 5 HOH A 167 884 1167 HOH HOH . J 5 HOH A 168 885 1168 HOH HOH . J 5 HOH A 169 886 1169 HOH HOH . J 5 HOH A 170 887 1170 HOH HOH . J 5 HOH A 171 888 1171 HOH HOH . J 5 HOH A 172 889 1172 HOH HOH . J 5 HOH A 173 890 1173 HOH HOH . J 5 HOH A 174 891 1174 HOH HOH . J 5 HOH A 175 892 1175 HOH HOH . J 5 HOH A 176 893 1176 HOH HOH . J 5 HOH A 177 894 1177 HOH HOH . J 5 HOH A 178 895 1178 HOH HOH . J 5 HOH A 179 896 1179 HOH HOH . J 5 HOH A 180 897 1180 HOH HOH . J 5 HOH A 181 898 1181 HOH HOH . J 5 HOH A 182 899 1182 HOH HOH . J 5 HOH A 183 900 1183 HOH HOH . J 5 HOH A 184 901 1184 HOH HOH . J 5 HOH A 185 902 1185 HOH HOH . J 5 HOH A 186 903 1186 HOH HOH . J 5 HOH A 187 904 1187 HOH HOH . J 5 HOH A 188 905 1188 HOH HOH . J 5 HOH A 189 906 1189 HOH HOH . J 5 HOH A 190 907 1190 HOH HOH . J 5 HOH A 191 908 1191 HOH HOH . J 5 HOH A 192 909 1192 HOH HOH . J 5 HOH A 193 910 1193 HOH HOH . J 5 HOH A 194 911 1194 HOH HOH . J 5 HOH A 195 912 1195 HOH HOH . J 5 HOH A 196 913 1196 HOH HOH . J 5 HOH A 197 914 1197 HOH HOH . J 5 HOH A 198 915 1198 HOH HOH . J 5 HOH A 199 916 1199 HOH HOH . J 5 HOH A 200 917 1200 HOH HOH . J 5 HOH A 201 918 1201 HOH HOH . J 5 HOH A 202 919 1202 HOH HOH . J 5 HOH A 203 920 1203 HOH HOH . J 5 HOH A 204 921 1204 HOH HOH . J 5 HOH A 205 922 1205 HOH HOH . J 5 HOH A 206 923 1206 HOH HOH . J 5 HOH A 207 924 1207 HOH HOH . J 5 HOH A 208 925 1208 HOH HOH . J 5 HOH A 209 926 1209 HOH HOH . J 5 HOH A 210 927 1210 HOH HOH . J 5 HOH A 211 928 1211 HOH HOH . J 5 HOH A 212 929 1212 HOH HOH . J 5 HOH A 213 930 1213 HOH HOH . J 5 HOH A 214 931 1214 HOH HOH . J 5 HOH A 215 932 1215 HOH HOH . J 5 HOH A 216 933 1216 HOH HOH . J 5 HOH A 217 934 1217 HOH HOH . J 5 HOH A 218 935 1218 HOH HOH . J 5 HOH A 219 936 1219 HOH HOH . J 5 HOH A 220 937 1220 HOH HOH . J 5 HOH A 221 938 1221 HOH HOH . J 5 HOH A 222 939 1222 HOH HOH . J 5 HOH A 223 940 1223 HOH HOH . J 5 HOH A 224 941 1224 HOH HOH . J 5 HOH A 225 942 1225 HOH HOH . J 5 HOH A 226 943 1226 HOH HOH . J 5 HOH A 227 944 1227 HOH HOH . J 5 HOH A 228 945 1228 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 4 35.727 0.687 13.505 1 60.93 ? C1 GOL 716 A 1 HETATM 2 O O1 GOL . . . H 4 35.825 2.079 13.196 1 62.66 ? O1 GOL 716 A 1 HETATM 3 C C2 GOL . . . H 4 34.792 0.464 14.692 1 46.7 ? C2 GOL 716 A 1 HETATM 4 O O2 GOL . . . H 4 33.629 -0.249 14.273 1 52.4 ? O2 GOL 716 A 1 HETATM 5 C C3 GOL . . . H 4 34.381 1.804 15.3 1 42.41 ? C3 GOL 716 A 1 HETATM 6 O O3 GOL . . . H 4 35.073 1.993 16.539 1 27.02 ? O3 GOL 716 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #