data_2PXR # _model_server_result.job_id 3YAZ4DhjuQDNqC6KhqmsZw _model_server_result.datetime_utc '2024-10-14 21:26:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2pxr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 2PXR # _exptl.entry_id 2PXR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2PXR _cell.length_a 42.187 _cell.length_b 62.777 _cell.length_c 106.286 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PXR _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2 A,B,C,D,E 3 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -53.143 3 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 84 C HIS 84 3_554 C ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc2 A ND1 HIS 87 C HIS 87 1_555 C ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc3 A OE1 GLU 98 C GLU 98 3_554 C ZN ZN . C ZN 401 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.934 ? metalc ? metalc4 A OE2 GLU 98 C GLU 98 3_554 C ZN ZN . C ZN 401 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.956 ? metalc ? metalc5 A NE2 HIS 120 C HIS 120 1_555 D ZN ZN . C ZN 402 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.961 ? metalc ? metalc6 A NE2 HIS 120 C HIS 120 1_555 D ZN ZN . C ZN 402 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc7 C ZN ZN . C ZN 401 1_555 E O HOH . C HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc8 D ZN ZN . C ZN 402 1_555 E O HOH . C HOH 574 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? metalc ? metalc9 D ZN ZN . C ZN 402 1_555 E O HOH . C HOH 574 3_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2PXR _atom_sites.fract_transf_matrix[1][1] 0.023704 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015929 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009409 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL C 1 400 400 CL CL . C 3 ZN C 1 401 401 ZN ZN . D 3 ZN C 1 402 402 ZN ZN . E 4 HOH C 1 403 1 HOH HOH . E 4 HOH C 2 404 2 HOH HOH . E 4 HOH C 3 405 3 HOH HOH . E 4 HOH C 4 406 4 HOH HOH . E 4 HOH C 5 407 5 HOH HOH . E 4 HOH C 6 408 6 HOH HOH . E 4 HOH C 7 409 7 HOH HOH . E 4 HOH C 8 410 8 HOH HOH . E 4 HOH C 9 411 9 HOH HOH . E 4 HOH C 10 412 10 HOH HOH . E 4 HOH C 11 413 11 HOH HOH . E 4 HOH C 12 414 12 HOH HOH . E 4 HOH C 13 415 13 HOH HOH . E 4 HOH C 14 416 14 HOH HOH . E 4 HOH C 15 417 15 HOH HOH . E 4 HOH C 16 418 16 HOH HOH . E 4 HOH C 17 419 17 HOH HOH . E 4 HOH C 18 420 18 HOH HOH . E 4 HOH C 19 421 19 HOH HOH . E 4 HOH C 20 422 20 HOH HOH . E 4 HOH C 21 423 21 HOH HOH . E 4 HOH C 22 424 22 HOH HOH . E 4 HOH C 23 425 23 HOH HOH . E 4 HOH C 24 426 24 HOH HOH . E 4 HOH C 25 427 25 HOH HOH . E 4 HOH C 26 428 26 HOH HOH . E 4 HOH C 27 429 27 HOH HOH . E 4 HOH C 28 430 28 HOH HOH . E 4 HOH C 29 431 29 HOH HOH . E 4 HOH C 30 432 30 HOH HOH . E 4 HOH C 31 433 31 HOH HOH . E 4 HOH C 32 434 32 HOH HOH . E 4 HOH C 33 435 33 HOH HOH . E 4 HOH C 34 436 34 HOH HOH . E 4 HOH C 35 437 35 HOH HOH . E 4 HOH C 36 438 36 HOH HOH . E 4 HOH C 37 439 37 HOH HOH . E 4 HOH C 38 440 38 HOH HOH . E 4 HOH C 39 441 39 HOH HOH . E 4 HOH C 40 442 40 HOH HOH . E 4 HOH C 41 443 41 HOH HOH . E 4 HOH C 42 444 42 HOH HOH . E 4 HOH C 43 445 43 HOH HOH . E 4 HOH C 44 446 44 HOH HOH . E 4 HOH C 45 447 45 HOH HOH . E 4 HOH C 46 448 46 HOH HOH . E 4 HOH C 47 449 47 HOH HOH . E 4 HOH C 48 450 48 HOH HOH . E 4 HOH C 49 451 49 HOH HOH . E 4 HOH C 50 452 50 HOH HOH . E 4 HOH C 51 453 51 HOH HOH . E 4 HOH C 52 454 52 HOH HOH . E 4 HOH C 53 455 53 HOH HOH . E 4 HOH C 54 456 54 HOH HOH . E 4 HOH C 55 457 55 HOH HOH . E 4 HOH C 56 458 56 HOH HOH . E 4 HOH C 57 459 57 HOH HOH . E 4 HOH C 58 460 58 HOH HOH . E 4 HOH C 59 461 59 HOH HOH . E 4 HOH C 60 462 60 HOH HOH . E 4 HOH C 61 463 61 HOH HOH . E 4 HOH C 62 464 62 HOH HOH . E 4 HOH C 63 465 63 HOH HOH . E 4 HOH C 64 466 64 HOH HOH . E 4 HOH C 65 467 65 HOH HOH . E 4 HOH C 66 468 66 HOH HOH . E 4 HOH C 67 469 67 HOH HOH . E 4 HOH C 68 470 68 HOH HOH . E 4 HOH C 69 471 69 HOH HOH . E 4 HOH C 70 472 70 HOH HOH . E 4 HOH C 71 473 71 HOH HOH . E 4 HOH C 72 474 72 HOH HOH . E 4 HOH C 73 475 73 HOH HOH . E 4 HOH C 74 476 74 HOH HOH . E 4 HOH C 75 477 75 HOH HOH . E 4 HOH C 76 478 76 HOH HOH . E 4 HOH C 77 479 77 HOH HOH . E 4 HOH C 78 480 78 HOH HOH . E 4 HOH C 79 481 79 HOH HOH . E 4 HOH C 80 482 80 HOH HOH . E 4 HOH C 81 483 81 HOH HOH . E 4 HOH C 82 484 82 HOH HOH . E 4 HOH C 83 485 83 HOH HOH . E 4 HOH C 84 486 84 HOH HOH . E 4 HOH C 85 487 85 HOH HOH . E 4 HOH C 86 488 86 HOH HOH . E 4 HOH C 87 489 87 HOH HOH . E 4 HOH C 88 490 88 HOH HOH . E 4 HOH C 89 491 89 HOH HOH . E 4 HOH C 90 492 90 HOH HOH . E 4 HOH C 91 493 91 HOH HOH . E 4 HOH C 92 494 92 HOH HOH . E 4 HOH C 93 495 93 HOH HOH . E 4 HOH C 94 496 94 HOH HOH . E 4 HOH C 95 497 95 HOH HOH . E 4 HOH C 96 498 96 HOH HOH . E 4 HOH C 97 499 97 HOH HOH . E 4 HOH C 98 500 98 HOH HOH . E 4 HOH C 99 501 99 HOH HOH . E 4 HOH C 100 502 100 HOH HOH . E 4 HOH C 101 503 101 HOH HOH . E 4 HOH C 102 504 102 HOH HOH . E 4 HOH C 103 505 103 HOH HOH . E 4 HOH C 104 506 104 HOH HOH . E 4 HOH C 105 507 105 HOH HOH . E 4 HOH C 106 508 106 HOH HOH . E 4 HOH C 107 509 107 HOH HOH . E 4 HOH C 108 510 108 HOH HOH . E 4 HOH C 109 511 109 HOH HOH . E 4 HOH C 110 512 110 HOH HOH . E 4 HOH C 111 513 111 HOH HOH . E 4 HOH C 112 514 112 HOH HOH . E 4 HOH C 113 515 113 HOH HOH . E 4 HOH C 114 516 114 HOH HOH . E 4 HOH C 115 517 115 HOH HOH . E 4 HOH C 116 518 116 HOH HOH . E 4 HOH C 117 519 117 HOH HOH . E 4 HOH C 118 520 118 HOH HOH . E 4 HOH C 119 521 119 HOH HOH . E 4 HOH C 120 522 120 HOH HOH . E 4 HOH C 121 523 121 HOH HOH . E 4 HOH C 122 524 122 HOH HOH . E 4 HOH C 123 525 123 HOH HOH . E 4 HOH C 124 526 124 HOH HOH . E 4 HOH C 125 527 125 HOH HOH . E 4 HOH C 126 528 126 HOH HOH . E 4 HOH C 127 529 127 HOH HOH . E 4 HOH C 128 530 128 HOH HOH . E 4 HOH C 129 531 129 HOH HOH . E 4 HOH C 130 532 130 HOH HOH . E 4 HOH C 131 533 131 HOH HOH . E 4 HOH C 132 534 132 HOH HOH . E 4 HOH C 133 535 133 HOH HOH . E 4 HOH C 134 536 134 HOH HOH . E 4 HOH C 135 537 135 HOH HOH . E 4 HOH C 136 538 136 HOH HOH . E 4 HOH C 137 539 137 HOH HOH . E 4 HOH C 138 540 138 HOH HOH . E 4 HOH C 139 541 139 HOH HOH . E 4 HOH C 140 542 140 HOH HOH . E 4 HOH C 141 543 141 HOH HOH . E 4 HOH C 142 544 142 HOH HOH . E 4 HOH C 143 545 143 HOH HOH . E 4 HOH C 144 546 144 HOH HOH . E 4 HOH C 145 547 145 HOH HOH . E 4 HOH C 146 548 146 HOH HOH . E 4 HOH C 147 549 147 HOH HOH . E 4 HOH C 148 550 148 HOH HOH . E 4 HOH C 149 551 149 HOH HOH . E 4 HOH C 150 552 150 HOH HOH . E 4 HOH C 151 553 151 HOH HOH . E 4 HOH C 152 554 152 HOH HOH . E 4 HOH C 153 555 153 HOH HOH . E 4 HOH C 154 556 154 HOH HOH . E 4 HOH C 155 557 155 HOH HOH . E 4 HOH C 156 558 156 HOH HOH . E 4 HOH C 157 559 157 HOH HOH . E 4 HOH C 158 560 158 HOH HOH . E 4 HOH C 159 561 159 HOH HOH . E 4 HOH C 160 562 160 HOH HOH . E 4 HOH C 161 563 161 HOH HOH . E 4 HOH C 162 564 162 HOH HOH . E 4 HOH C 163 565 163 HOH HOH . E 4 HOH C 164 566 164 HOH HOH . E 4 HOH C 165 567 165 HOH HOH . E 4 HOH C 166 568 166 HOH HOH . E 4 HOH C 167 569 167 HOH HOH . E 4 HOH C 168 570 168 HOH HOH . E 4 HOH C 169 571 169 HOH HOH . E 4 HOH C 170 572 170 HOH HOH . E 4 HOH C 171 573 171 HOH HOH . E 4 HOH C 172 574 172 HOH HOH . E 4 HOH C 173 575 173 HOH HOH . E 4 HOH C 174 576 174 HOH HOH . E 4 HOH C 175 577 175 HOH HOH . E 4 HOH C 176 578 176 HOH HOH . E 4 HOH C 177 579 177 HOH HOH . E 4 HOH C 178 580 178 HOH HOH . E 4 HOH C 179 581 179 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -0.01 _atom_site.Cartn_y 3.357 _atom_site.Cartn_z -26.625 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 48.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 402 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 634 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #