data_2PY3 # _model_server_result.job_id FumpNgDhZKvH4RJMXez7zQ _model_server_result.datetime_utc '2024-12-04 17:05:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2py3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":801}' # _entry.id 2PY3 # _exptl.entry_id 2PY3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2PY3 _cell.length_a 104.897 _cell.length_b 114.748 _cell.length_c 64.44 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PY3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND2 ASN 187 A ASN 631 1_555 E MG MG . A MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc2 A OD2 ASP 200 A ASP 644 1_555 E MG MG . A MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc3 A OD1 ASP 200 A ASP 644 1_555 F MG MG . A MG 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc4 A OD2 ASP 200 A ASP 644 1_555 F MG MG . A MG 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc5 E MG MG . A MG 803 1_555 G O1G ACP . A ACP 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 4.658 ? metalc ? metalc6 E MG MG . A MG 803 1_555 G O2A ACP . A ACP 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 4.402 ? metalc ? metalc7 E MG MG . A MG 803 1_555 G O1A ACP . A ACP 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc8 E MG MG . A MG 803 1_555 G O3G ACP . A ACP 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc9 E MG MG . A MG 803 1_555 M O HOH . A HOH 934 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc10 E MG MG . A MG 803 1_555 M O HOH . A HOH 946 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc11 F MG MG . A MG 804 1_555 G O2G ACP . A ACP 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc12 F MG MG . A MG 804 1_555 G O2B ACP . A ACP 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 4.491 ? metalc ? metalc13 F MG MG . A MG 804 1_555 G O1B ACP . A ACP 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc14 F MG MG . A MG 804 1_555 M O HOH . A HOH 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc15 F MG MG . A MG 804 1_555 M O HOH . A HOH 932 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc16 B ND2 ASN 187 B ASN 631 1_555 J MG MG . B MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc17 B OD2 ASP 200 B ASP 644 1_555 J MG MG . B MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc18 B OD1 ASP 200 B ASP 644 1_555 K MG MG . B MG 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc19 B OD2 ASP 200 B ASP 644 1_555 K MG MG . B MG 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc20 J MG MG . B MG 803 1_555 L O1G ACP . B ACP 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.531 ? metalc ? metalc21 J MG MG . B MG 803 1_555 L O2A ACP . B ACP 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc22 J MG MG . B MG 803 1_555 L O2G ACP . B ACP 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc23 J MG MG . B MG 803 1_555 N O HOH . B HOH 979 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc24 J MG MG . B MG 803 1_555 N O HOH . B HOH 988 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc25 K MG MG . B MG 804 1_555 L O2B ACP . B ACP 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 4.599 ? metalc ? metalc26 K MG MG . B MG 804 1_555 L O2G ACP . B ACP 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.945 ? metalc ? metalc27 K MG MG . B MG 804 1_555 L O1B ACP . B ACP 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc28 K MG MG . B MG 804 1_555 L O1G ACP . B ACP 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc29 K MG MG . B MG 804 1_555 N O HOH . B HOH 961 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc30 K MG MG . B MG 804 1_555 N O HOH . B HOH 980 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 341 n n S O2 SO4 doub 342 n n S O3 SO4 sing 343 n n S O4 SO4 sing 344 n n # _atom_sites.entry_id 2PY3 _atom_sites.fract_transf_matrix[1][1] 0.009533 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008715 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015518 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 801 303 SO4 SO4 . D 2 SO4 A 1 802 304 SO4 SO4 . E 3 MG A 1 803 301 MG MG . F 3 MG A 1 804 302 MG MG . G 4 ACP A 1 805 300 ACP PCP . H 2 SO4 B 1 801 1303 SO4 SO4 . I 2 SO4 B 1 802 1304 SO4 SO4 . J 3 MG B 1 803 1301 MG MG . K 3 MG B 1 804 1302 MG MG . L 4 ACP B 1 805 1300 ACP PCP . M 5 HOH A 1 901 1 HOH HOH . M 5 HOH A 2 902 2 HOH HOH . M 5 HOH A 3 903 3 HOH HOH . M 5 HOH A 4 904 11 HOH HOH . M 5 HOH A 5 905 14 HOH HOH . M 5 HOH A 6 906 16 HOH HOH . M 5 HOH A 7 907 20 HOH HOH . M 5 HOH A 8 908 21 HOH HOH . M 5 HOH A 9 909 24 HOH HOH . M 5 HOH A 10 910 25 HOH HOH . M 5 HOH A 11 911 27 HOH HOH . M 5 HOH A 12 912 28 HOH HOH . M 5 HOH A 13 913 30 HOH HOH . M 5 HOH A 14 914 31 HOH HOH . M 5 HOH A 15 915 32 HOH HOH . M 5 HOH A 16 916 33 HOH HOH . M 5 HOH A 17 917 34 HOH HOH . M 5 HOH A 18 918 36 HOH HOH . M 5 HOH A 19 919 38 HOH HOH . M 5 HOH A 20 920 40 HOH HOH . M 5 HOH A 21 921 44 HOH HOH . M 5 HOH A 22 922 45 HOH HOH . M 5 HOH A 23 923 46 HOH HOH . M 5 HOH A 24 924 49 HOH HOH . M 5 HOH A 25 925 52 HOH HOH . M 5 HOH A 26 926 53 HOH HOH . M 5 HOH A 27 927 54 HOH HOH . M 5 HOH A 28 928 55 HOH HOH . M 5 HOH A 29 929 64 HOH HOH . M 5 HOH A 30 930 65 HOH HOH . M 5 HOH A 31 931 67 HOH HOH . M 5 HOH A 32 932 71 HOH HOH . M 5 HOH A 33 933 72 HOH HOH . M 5 HOH A 34 934 73 HOH HOH . M 5 HOH A 35 935 74 HOH HOH . M 5 HOH A 36 936 77 HOH HOH . M 5 HOH A 37 937 80 HOH HOH . M 5 HOH A 38 938 81 HOH HOH . M 5 HOH A 39 939 83 HOH HOH . M 5 HOH A 40 940 87 HOH HOH . M 5 HOH A 41 941 90 HOH HOH . M 5 HOH A 42 942 92 HOH HOH . M 5 HOH A 43 943 93 HOH HOH . M 5 HOH A 44 944 97 HOH HOH . M 5 HOH A 45 945 98 HOH HOH . M 5 HOH A 46 946 99 HOH HOH . M 5 HOH A 47 947 100 HOH HOH . M 5 HOH A 48 948 101 HOH HOH . M 5 HOH A 49 949 104 HOH HOH . M 5 HOH A 50 950 105 HOH HOH . M 5 HOH A 51 951 106 HOH HOH . M 5 HOH A 52 952 107 HOH HOH . M 5 HOH A 53 953 112 HOH HOH . M 5 HOH A 54 954 113 HOH HOH . M 5 HOH A 55 955 117 HOH HOH . M 5 HOH A 56 956 118 HOH HOH . M 5 HOH A 57 957 119 HOH HOH . M 5 HOH A 58 958 122 HOH HOH . M 5 HOH A 59 959 123 HOH HOH . M 5 HOH A 60 960 126 HOH HOH . M 5 HOH A 61 961 127 HOH HOH . M 5 HOH A 62 962 128 HOH HOH . M 5 HOH A 63 963 129 HOH HOH . M 5 HOH A 64 964 130 HOH HOH . M 5 HOH A 65 965 131 HOH HOH . M 5 HOH A 66 966 132 HOH HOH . M 5 HOH A 67 967 133 HOH HOH . M 5 HOH A 68 968 136 HOH HOH . M 5 HOH A 69 969 138 HOH HOH . M 5 HOH A 70 970 139 HOH HOH . M 5 HOH A 71 971 141 HOH HOH . M 5 HOH A 72 972 143 HOH HOH . M 5 HOH A 73 973 144 HOH HOH . M 5 HOH A 74 974 147 HOH HOH . M 5 HOH A 75 975 148 HOH HOH . M 5 HOH A 76 976 151 HOH HOH . M 5 HOH A 77 977 154 HOH HOH . M 5 HOH A 78 978 156 HOH HOH . M 5 HOH A 79 979 157 HOH HOH . M 5 HOH A 80 980 158 HOH HOH . M 5 HOH A 81 981 161 HOH HOH . M 5 HOH A 82 982 165 HOH HOH . M 5 HOH A 83 983 169 HOH HOH . M 5 HOH A 84 984 171 HOH HOH . N 5 HOH B 1 901 4 HOH HOH . N 5 HOH B 2 902 5 HOH HOH . N 5 HOH B 3 903 6 HOH HOH . N 5 HOH B 4 904 7 HOH HOH . N 5 HOH B 5 905 8 HOH HOH . N 5 HOH B 6 906 9 HOH HOH . N 5 HOH B 7 907 10 HOH HOH . N 5 HOH B 8 908 12 HOH HOH . N 5 HOH B 9 909 13 HOH HOH . N 5 HOH B 10 910 15 HOH HOH . N 5 HOH B 11 911 17 HOH HOH . N 5 HOH B 12 912 18 HOH HOH . N 5 HOH B 13 913 19 HOH HOH . N 5 HOH B 14 914 22 HOH HOH . N 5 HOH B 15 915 23 HOH HOH . N 5 HOH B 16 916 26 HOH HOH . N 5 HOH B 17 917 29 HOH HOH . N 5 HOH B 18 918 35 HOH HOH . N 5 HOH B 19 919 37 HOH HOH . N 5 HOH B 20 920 39 HOH HOH . N 5 HOH B 21 921 41 HOH HOH . N 5 HOH B 22 922 42 HOH HOH . N 5 HOH B 23 923 43 HOH HOH . N 5 HOH B 24 924 47 HOH HOH . N 5 HOH B 25 925 48 HOH HOH . N 5 HOH B 26 926 50 HOH HOH . N 5 HOH B 27 927 51 HOH HOH . N 5 HOH B 28 928 56 HOH HOH . N 5 HOH B 29 929 57 HOH HOH . N 5 HOH B 30 930 58 HOH HOH . N 5 HOH B 31 931 59 HOH HOH . N 5 HOH B 32 932 60 HOH HOH . N 5 HOH B 33 933 61 HOH HOH . N 5 HOH B 34 934 62 HOH HOH . N 5 HOH B 35 935 63 HOH HOH . N 5 HOH B 36 936 66 HOH HOH . N 5 HOH B 37 937 68 HOH HOH . N 5 HOH B 38 938 69 HOH HOH . N 5 HOH B 39 939 70 HOH HOH . N 5 HOH B 40 940 75 HOH HOH . N 5 HOH B 41 941 76 HOH HOH . N 5 HOH B 42 942 78 HOH HOH . N 5 HOH B 43 943 79 HOH HOH . N 5 HOH B 44 944 82 HOH HOH . N 5 HOH B 45 945 84 HOH HOH . N 5 HOH B 46 946 85 HOH HOH . N 5 HOH B 47 947 86 HOH HOH . N 5 HOH B 48 948 88 HOH HOH . N 5 HOH B 49 949 89 HOH HOH . N 5 HOH B 50 950 91 HOH HOH . N 5 HOH B 51 951 94 HOH HOH . N 5 HOH B 52 952 95 HOH HOH . N 5 HOH B 53 953 96 HOH HOH . N 5 HOH B 54 954 102 HOH HOH . N 5 HOH B 55 955 103 HOH HOH . N 5 HOH B 56 956 108 HOH HOH . N 5 HOH B 57 957 109 HOH HOH . N 5 HOH B 58 958 110 HOH HOH . N 5 HOH B 59 959 111 HOH HOH . N 5 HOH B 60 960 114 HOH HOH . N 5 HOH B 61 961 115 HOH HOH . N 5 HOH B 62 962 116 HOH HOH . N 5 HOH B 63 963 120 HOH HOH . N 5 HOH B 64 964 121 HOH HOH . N 5 HOH B 65 965 124 HOH HOH . N 5 HOH B 66 966 125 HOH HOH . N 5 HOH B 67 967 134 HOH HOH . N 5 HOH B 68 968 135 HOH HOH . N 5 HOH B 69 969 137 HOH HOH . N 5 HOH B 70 970 140 HOH HOH . N 5 HOH B 71 971 142 HOH HOH . N 5 HOH B 72 972 145 HOH HOH . N 5 HOH B 73 973 146 HOH HOH . N 5 HOH B 74 974 149 HOH HOH . N 5 HOH B 75 975 150 HOH HOH . N 5 HOH B 76 976 152 HOH HOH . N 5 HOH B 77 977 153 HOH HOH . N 5 HOH B 78 978 155 HOH HOH . N 5 HOH B 79 979 159 HOH HOH . N 5 HOH B 80 980 160 HOH HOH . N 5 HOH B 81 981 162 HOH HOH . N 5 HOH B 82 982 163 HOH HOH . N 5 HOH B 83 983 164 HOH HOH . N 5 HOH B 84 984 166 HOH HOH . N 5 HOH B 85 985 167 HOH HOH . N 5 HOH B 86 986 168 HOH HOH . N 5 HOH B 87 987 170 HOH HOH . N 5 HOH B 88 988 172 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . H 2 30.77 31.294 2.522 1 30.89 ? S SO4 801 B 1 HETATM 2 O O1 SO4 . . . H 2 31.578 30.407 1.666 1 32.47 ? O1 SO4 801 B 1 HETATM 3 O O2 SO4 . . . H 2 29.682 31.893 1.733 1 32.69 ? O2 SO4 801 B 1 HETATM 4 O O3 SO4 . . . H 2 31.621 32.36 3.07 1 32.59 ? O3 SO4 801 B 1 HETATM 5 O O4 SO4 . . . H 2 30.195 30.521 3.632 1 33.58 ? O4 SO4 801 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #