data_2PZV # _model_server_result.job_id 5SXnqBMY0ODNJoRvgff1jQ _model_server_result.datetime_utc '2024-11-06 04:43:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2pzv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 2PZV # _exptl.entry_id 2PZV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.111 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHENOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90.02 _cell.angle_beta 89.98 _cell.angle_gamma 110.21 _cell.entry_id 2PZV _cell.length_a 34.905 _cell.length_b 50.54 _cell.length_c 72.29 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2PZV _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C6 H6 O' _chem_comp.formula_weight 94.111 _chem_comp.id IPH _chem_comp.mon_nstd_flag . _chem_comp.name PHENOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IPH doub 173 n y C1 C6 IPH sing 174 n y C1 O1 IPH sing 175 n n C2 C3 IPH sing 176 n y C2 H2 IPH sing 177 n n C3 C4 IPH doub 178 n y C3 H3 IPH sing 179 n n C4 C5 IPH sing 180 n y C4 H4 IPH sing 181 n n C5 C6 IPH doub 182 n y C5 H5 IPH sing 183 n n C6 H6 IPH sing 184 n n O1 HO1 IPH sing 185 n n # _atom_sites.entry_id 2PZV _atom_sites.fract_transf_matrix[1][1] 0.028649 _atom_sites.fract_transf_matrix[1][2] 0.010547 _atom_sites.fract_transf_matrix[1][3] -0.000007 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021084 _atom_sites.fract_transf_matrix[2][3] 0.000005 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013833 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 IPH A 1 401 401 IPH IPH . F 2 IPH B 1 402 402 IPH IPH . G 2 IPH C 1 403 403 IPH IPH . H 2 IPH D 1 404 404 IPH IPH . I 3 HOH A 1 402 1 HOH HOH . I 3 HOH A 2 403 9 HOH HOH . I 3 HOH A 3 404 11 HOH HOH . I 3 HOH A 4 405 13 HOH HOH . I 3 HOH A 5 406 14 HOH HOH . I 3 HOH A 6 407 22 HOH HOH . I 3 HOH A 7 408 30 HOH HOH . I 3 HOH A 8 409 35 HOH HOH . I 3 HOH A 9 410 36 HOH HOH . I 3 HOH A 10 411 39 HOH HOH . I 3 HOH A 11 412 42 HOH HOH . I 3 HOH A 12 413 47 HOH HOH . I 3 HOH A 13 414 49 HOH HOH . I 3 HOH A 14 415 51 HOH HOH . I 3 HOH A 15 416 53 HOH HOH . I 3 HOH A 16 417 63 HOH HOH . I 3 HOH A 17 418 67 HOH HOH . I 3 HOH A 18 419 68 HOH HOH . I 3 HOH A 19 420 69 HOH HOH . I 3 HOH A 20 421 74 HOH HOH . I 3 HOH A 21 422 77 HOH HOH . I 3 HOH A 22 423 79 HOH HOH . I 3 HOH A 23 424 81 HOH HOH . I 3 HOH A 24 425 85 HOH HOH . I 3 HOH A 25 426 96 HOH HOH . I 3 HOH A 26 427 99 HOH HOH . I 3 HOH A 27 428 105 HOH HOH . I 3 HOH A 28 429 106 HOH HOH . I 3 HOH A 29 430 116 HOH HOH . I 3 HOH A 30 431 118 HOH HOH . I 3 HOH A 31 432 122 HOH HOH . I 3 HOH A 32 433 127 HOH HOH . I 3 HOH A 33 434 129 HOH HOH . I 3 HOH A 34 435 133 HOH HOH . I 3 HOH A 35 436 138 HOH HOH . I 3 HOH A 36 437 139 HOH HOH . I 3 HOH A 37 438 149 HOH HOH . I 3 HOH A 38 439 153 HOH HOH . I 3 HOH A 39 440 155 HOH HOH . I 3 HOH A 40 441 156 HOH HOH . I 3 HOH A 41 442 162 HOH HOH . I 3 HOH A 42 443 165 HOH HOH . I 3 HOH A 43 444 172 HOH HOH . I 3 HOH A 44 445 180 HOH HOH . I 3 HOH A 45 446 183 HOH HOH . I 3 HOH A 46 447 184 HOH HOH . I 3 HOH A 47 448 185 HOH HOH . I 3 HOH A 48 449 186 HOH HOH . I 3 HOH A 49 450 188 HOH HOH . I 3 HOH A 50 451 194 HOH HOH . I 3 HOH A 51 452 195 HOH HOH . I 3 HOH A 52 453 197 HOH HOH . I 3 HOH A 53 454 198 HOH HOH . I 3 HOH A 54 455 209 HOH HOH . I 3 HOH A 55 456 210 HOH HOH . I 3 HOH A 56 457 211 HOH HOH . I 3 HOH A 57 458 219 HOH HOH . I 3 HOH A 58 459 230 HOH HOH . I 3 HOH A 59 460 231 HOH HOH . I 3 HOH A 60 461 239 HOH HOH . I 3 HOH A 61 462 240 HOH HOH . I 3 HOH A 62 463 243 HOH HOH . I 3 HOH A 63 464 254 HOH HOH . I 3 HOH A 64 465 256 HOH HOH . I 3 HOH A 65 466 260 HOH HOH . I 3 HOH A 66 467 271 HOH HOH . I 3 HOH A 67 468 275 HOH HOH . I 3 HOH A 68 469 280 HOH HOH . I 3 HOH A 69 470 289 HOH HOH . I 3 HOH A 70 471 291 HOH HOH . I 3 HOH A 71 472 292 HOH HOH . I 3 HOH A 72 473 295 HOH HOH . I 3 HOH A 73 474 301 HOH HOH . I 3 HOH A 74 475 302 HOH HOH . I 3 HOH A 75 476 309 HOH HOH . I 3 HOH A 76 477 310 HOH HOH . I 3 HOH A 77 478 312 HOH HOH . I 3 HOH A 78 479 316 HOH HOH . I 3 HOH A 79 480 317 HOH HOH . J 3 HOH B 1 403 4 HOH HOH . J 3 HOH B 2 404 12 HOH HOH . J 3 HOH B 3 405 15 HOH HOH . J 3 HOH B 4 406 17 HOH HOH . J 3 HOH B 5 407 20 HOH HOH . J 3 HOH B 6 408 23 HOH HOH . J 3 HOH B 7 409 27 HOH HOH . J 3 HOH B 8 410 32 HOH HOH . J 3 HOH B 9 411 33 HOH HOH . J 3 HOH B 10 412 38 HOH HOH . J 3 HOH B 11 413 52 HOH HOH . J 3 HOH B 12 414 56 HOH HOH . J 3 HOH B 13 415 57 HOH HOH . J 3 HOH B 14 416 61 HOH HOH . J 3 HOH B 15 417 62 HOH HOH . J 3 HOH B 16 418 65 HOH HOH . J 3 HOH B 17 419 75 HOH HOH . J 3 HOH B 18 420 80 HOH HOH . J 3 HOH B 19 421 82 HOH HOH . J 3 HOH B 20 422 84 HOH HOH . J 3 HOH B 21 423 93 HOH HOH . J 3 HOH B 22 424 97 HOH HOH . J 3 HOH B 23 425 100 HOH HOH . J 3 HOH B 24 426 109 HOH HOH . J 3 HOH B 25 427 110 HOH HOH . J 3 HOH B 26 428 112 HOH HOH . J 3 HOH B 27 429 117 HOH HOH . J 3 HOH B 28 430 121 HOH HOH . J 3 HOH B 29 431 128 HOH HOH . J 3 HOH B 30 432 130 HOH HOH . J 3 HOH B 31 433 132 HOH HOH . J 3 HOH B 32 434 135 HOH HOH . J 3 HOH B 33 435 140 HOH HOH . J 3 HOH B 34 436 141 HOH HOH . J 3 HOH B 35 437 142 HOH HOH . J 3 HOH B 36 438 144 HOH HOH . J 3 HOH B 37 439 146 HOH HOH . J 3 HOH B 38 440 148 HOH HOH . J 3 HOH B 39 441 151 HOH HOH . J 3 HOH B 40 442 152 HOH HOH . J 3 HOH B 41 443 158 HOH HOH . J 3 HOH B 42 444 160 HOH HOH . J 3 HOH B 43 445 161 HOH HOH . J 3 HOH B 44 446 166 HOH HOH . J 3 HOH B 45 447 168 HOH HOH . J 3 HOH B 46 448 170 HOH HOH . J 3 HOH B 47 449 173 HOH HOH . J 3 HOH B 48 450 191 HOH HOH . J 3 HOH B 49 451 192 HOH HOH . J 3 HOH B 50 452 200 HOH HOH . J 3 HOH B 51 453 204 HOH HOH . J 3 HOH B 52 454 206 HOH HOH . J 3 HOH B 53 455 213 HOH HOH . J 3 HOH B 54 456 214 HOH HOH . J 3 HOH B 55 457 218 HOH HOH . J 3 HOH B 56 458 220 HOH HOH . J 3 HOH B 57 459 223 HOH HOH . J 3 HOH B 58 460 234 HOH HOH . J 3 HOH B 59 461 237 HOH HOH . J 3 HOH B 60 462 241 HOH HOH . J 3 HOH B 61 463 246 HOH HOH . J 3 HOH B 62 464 252 HOH HOH . J 3 HOH B 63 465 261 HOH HOH . J 3 HOH B 64 466 263 HOH HOH . J 3 HOH B 65 467 269 HOH HOH . J 3 HOH B 66 468 270 HOH HOH . J 3 HOH B 67 469 272 HOH HOH . J 3 HOH B 68 470 273 HOH HOH . J 3 HOH B 69 471 274 HOH HOH . J 3 HOH B 70 472 283 HOH HOH . J 3 HOH B 71 473 285 HOH HOH . J 3 HOH B 72 474 294 HOH HOH . J 3 HOH B 73 475 297 HOH HOH . J 3 HOH B 74 476 298 HOH HOH . J 3 HOH B 75 477 307 HOH HOH . J 3 HOH B 76 478 315 HOH HOH . K 3 HOH C 1 404 3 HOH HOH . K 3 HOH C 2 405 6 HOH HOH . K 3 HOH C 3 406 7 HOH HOH . K 3 HOH C 4 407 16 HOH HOH . K 3 HOH C 5 408 21 HOH HOH . K 3 HOH C 6 409 24 HOH HOH . K 3 HOH C 7 410 26 HOH HOH . K 3 HOH C 8 411 29 HOH HOH . K 3 HOH C 9 412 37 HOH HOH . K 3 HOH C 10 413 40 HOH HOH . K 3 HOH C 11 414 41 HOH HOH . K 3 HOH C 12 415 43 HOH HOH . K 3 HOH C 13 416 50 HOH HOH . K 3 HOH C 14 417 55 HOH HOH . K 3 HOH C 15 418 58 HOH HOH . K 3 HOH C 16 419 59 HOH HOH . K 3 HOH C 17 420 60 HOH HOH . K 3 HOH C 18 421 66 HOH HOH . K 3 HOH C 19 422 71 HOH HOH . K 3 HOH C 20 423 76 HOH HOH . K 3 HOH C 21 424 78 HOH HOH . K 3 HOH C 22 425 87 HOH HOH . K 3 HOH C 23 426 92 HOH HOH . K 3 HOH C 24 427 94 HOH HOH . K 3 HOH C 25 428 95 HOH HOH . K 3 HOH C 26 429 104 HOH HOH . K 3 HOH C 27 430 111 HOH HOH . K 3 HOH C 28 431 113 HOH HOH . K 3 HOH C 29 432 115 HOH HOH . K 3 HOH C 30 433 120 HOH HOH . K 3 HOH C 31 434 123 HOH HOH . K 3 HOH C 32 435 126 HOH HOH . K 3 HOH C 33 436 131 HOH HOH . K 3 HOH C 34 437 134 HOH HOH . K 3 HOH C 35 438 136 HOH HOH . K 3 HOH C 36 439 137 HOH HOH . K 3 HOH C 37 440 147 HOH HOH . K 3 HOH C 38 441 150 HOH HOH . K 3 HOH C 39 442 154 HOH HOH . K 3 HOH C 40 443 157 HOH HOH . K 3 HOH C 41 444 163 HOH HOH . K 3 HOH C 42 445 167 HOH HOH . K 3 HOH C 43 446 169 HOH HOH . K 3 HOH C 44 447 175 HOH HOH . K 3 HOH C 45 448 176 HOH HOH . K 3 HOH C 46 449 179 HOH HOH . K 3 HOH C 47 450 182 HOH HOH . K 3 HOH C 48 451 203 HOH HOH . K 3 HOH C 49 452 205 HOH HOH . K 3 HOH C 50 453 207 HOH HOH . K 3 HOH C 51 454 215 HOH HOH . K 3 HOH C 52 455 217 HOH HOH . K 3 HOH C 53 456 224 HOH HOH . K 3 HOH C 54 457 226 HOH HOH . K 3 HOH C 55 458 229 HOH HOH . K 3 HOH C 56 459 238 HOH HOH . K 3 HOH C 57 460 242 HOH HOH . K 3 HOH C 58 461 248 HOH HOH . K 3 HOH C 59 462 249 HOH HOH . K 3 HOH C 60 463 253 HOH HOH . K 3 HOH C 61 464 264 HOH HOH . K 3 HOH C 62 465 277 HOH HOH . K 3 HOH C 63 466 278 HOH HOH . K 3 HOH C 64 467 281 HOH HOH . K 3 HOH C 65 468 282 HOH HOH . K 3 HOH C 66 469 286 HOH HOH . K 3 HOH C 67 470 287 HOH HOH . K 3 HOH C 68 471 288 HOH HOH . K 3 HOH C 69 472 290 HOH HOH . K 3 HOH C 70 473 293 HOH HOH . K 3 HOH C 71 474 299 HOH HOH . K 3 HOH C 72 475 300 HOH HOH . K 3 HOH C 73 476 303 HOH HOH . K 3 HOH C 74 477 304 HOH HOH . K 3 HOH C 75 478 305 HOH HOH . L 3 HOH D 1 405 2 HOH HOH . L 3 HOH D 2 406 5 HOH HOH . L 3 HOH D 3 407 8 HOH HOH . L 3 HOH D 4 408 10 HOH HOH . L 3 HOH D 5 409 18 HOH HOH . L 3 HOH D 6 410 19 HOH HOH . L 3 HOH D 7 411 25 HOH HOH . L 3 HOH D 8 412 28 HOH HOH . L 3 HOH D 9 413 31 HOH HOH . L 3 HOH D 10 414 34 HOH HOH . L 3 HOH D 11 415 44 HOH HOH . L 3 HOH D 12 416 45 HOH HOH . L 3 HOH D 13 417 46 HOH HOH . L 3 HOH D 14 418 48 HOH HOH . L 3 HOH D 15 419 54 HOH HOH . L 3 HOH D 16 420 64 HOH HOH . L 3 HOH D 17 421 70 HOH HOH . L 3 HOH D 18 422 72 HOH HOH . L 3 HOH D 19 423 73 HOH HOH . L 3 HOH D 20 424 83 HOH HOH . L 3 HOH D 21 425 86 HOH HOH . L 3 HOH D 22 426 88 HOH HOH . L 3 HOH D 23 427 89 HOH HOH . L 3 HOH D 24 428 90 HOH HOH . L 3 HOH D 25 429 91 HOH HOH . L 3 HOH D 26 430 98 HOH HOH . L 3 HOH D 27 431 101 HOH HOH . L 3 HOH D 28 432 102 HOH HOH . L 3 HOH D 29 433 103 HOH HOH . L 3 HOH D 30 434 107 HOH HOH . L 3 HOH D 31 435 108 HOH HOH . L 3 HOH D 32 436 114 HOH HOH . L 3 HOH D 33 437 119 HOH HOH . L 3 HOH D 34 438 124 HOH HOH . L 3 HOH D 35 439 125 HOH HOH . L 3 HOH D 36 440 143 HOH HOH . L 3 HOH D 37 441 145 HOH HOH . L 3 HOH D 38 442 159 HOH HOH . L 3 HOH D 39 443 164 HOH HOH . L 3 HOH D 40 444 171 HOH HOH . L 3 HOH D 41 445 174 HOH HOH . L 3 HOH D 42 446 177 HOH HOH . L 3 HOH D 43 447 178 HOH HOH . L 3 HOH D 44 448 181 HOH HOH . L 3 HOH D 45 449 187 HOH HOH . L 3 HOH D 46 450 189 HOH HOH . L 3 HOH D 47 451 190 HOH HOH . L 3 HOH D 48 452 193 HOH HOH . L 3 HOH D 49 453 196 HOH HOH . L 3 HOH D 50 454 199 HOH HOH . L 3 HOH D 51 455 201 HOH HOH . L 3 HOH D 52 456 202 HOH HOH . L 3 HOH D 53 457 208 HOH HOH . L 3 HOH D 54 458 212 HOH HOH . L 3 HOH D 55 459 216 HOH HOH . L 3 HOH D 56 460 221 HOH HOH . L 3 HOH D 57 461 222 HOH HOH . L 3 HOH D 58 462 225 HOH HOH . L 3 HOH D 59 463 227 HOH HOH . L 3 HOH D 60 464 228 HOH HOH . L 3 HOH D 61 465 232 HOH HOH . L 3 HOH D 62 466 233 HOH HOH . L 3 HOH D 63 467 235 HOH HOH . L 3 HOH D 64 468 236 HOH HOH . L 3 HOH D 65 469 244 HOH HOH . L 3 HOH D 66 470 245 HOH HOH . L 3 HOH D 67 471 247 HOH HOH . L 3 HOH D 68 472 250 HOH HOH . L 3 HOH D 69 473 251 HOH HOH . L 3 HOH D 70 474 255 HOH HOH . L 3 HOH D 71 475 257 HOH HOH . L 3 HOH D 72 476 258 HOH HOH . L 3 HOH D 73 477 259 HOH HOH . L 3 HOH D 74 478 262 HOH HOH . L 3 HOH D 75 479 265 HOH HOH . L 3 HOH D 76 480 266 HOH HOH . L 3 HOH D 77 481 267 HOH HOH . L 3 HOH D 78 482 268 HOH HOH . L 3 HOH D 79 483 276 HOH HOH . L 3 HOH D 80 484 279 HOH HOH . L 3 HOH D 81 485 284 HOH HOH . L 3 HOH D 82 486 296 HOH HOH . L 3 HOH D 83 487 306 HOH HOH . L 3 HOH D 84 488 308 HOH HOH . L 3 HOH D 85 489 311 HOH HOH . L 3 HOH D 86 490 313 HOH HOH . L 3 HOH D 87 491 314 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPH . . . E 2 -1.464 -0.266 -3.108 1 30.18 ? C1 IPH 401 A 1 HETATM 2 C C2 IPH . . . E 2 -1.37 -1.304 -4.032 1 30.48 ? C2 IPH 401 A 1 HETATM 3 C C3 IPH . . . E 2 -2.041 -1.213 -5.253 1 28.55 ? C3 IPH 401 A 1 HETATM 4 C C4 IPH . . . E 2 -2.847 -0.069 -5.483 1 33.87 ? C4 IPH 401 A 1 HETATM 5 C C5 IPH . . . E 2 -2.938 0.973 -4.525 1 35.12 ? C5 IPH 401 A 1 HETATM 6 C C6 IPH . . . E 2 -2.268 0.867 -3.309 1 33.37 ? C6 IPH 401 A 1 HETATM 7 O O1 IPH . . . E 2 -0.769 -0.461 -1.949 1 24.8 ? O1 IPH 401 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 24 _model_server_stats.element_count 7 #