data_2Q0N
#
_model_server_result.job_id            t4b4_HiL7BirIqHhwQm4-Q 
_model_server_result.datetime_utc      '2024-11-22 09:10:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2q0n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":595}' 
#
_entry.id    2Q0N 
#
_exptl.entry_id    2Q0N 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2Q0N 
_cell.length_a            145.678 
_cell.length_b            145.678 
_cell.length_c            39.577 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2Q0N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C LYS 183 A LYS 473 1_555 A N SEP 184 A SEP 474 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale2 A C SEP 184 A SEP 474 1_555 A N LEU 185 A LEU 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     2Q0N 
_atom_sites.fract_transf_matrix[1][1]    0.006864 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006864 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.025267 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SO4 A 1 592 301 SO4 SO4 . 
D 4 EDO A 1 593 401 EDO EDO . 
E 4 EDO A 1 594 402 EDO EDO . 
F 4 EDO A 1 595 404 EDO EDO . 
G 4 EDO A 1 596 405 EDO EDO . 
H 4 EDO A 1 597 406 EDO EDO . 
I 4 EDO A 1 598 407 EDO EDO . 
J 4 EDO A 1 599 408 EDO EDO . 
K 4 EDO B 1 403 403 EDO EDO . 
L 5 HOH A 1 1 1 HOH HOH . 
L 5 HOH A 2 2 2 HOH HOH . 
L 5 HOH A 3 3 3 HOH HOH . 
L 5 HOH A 4 5 5 HOH HOH . 
L 5 HOH A 5 6 6 HOH HOH . 
L 5 HOH A 6 7 7 HOH HOH . 
L 5 HOH A 7 8 8 HOH HOH . 
L 5 HOH A 8 9 9 HOH HOH . 
L 5 HOH A 9 10 10 HOH HOH . 
L 5 HOH A 10 11 11 HOH HOH . 
L 5 HOH A 11 12 12 HOH HOH . 
L 5 HOH A 12 13 13 HOH HOH . 
L 5 HOH A 13 14 14 HOH HOH . 
L 5 HOH A 14 15 15 HOH HOH . 
L 5 HOH A 15 16 16 HOH HOH . 
L 5 HOH A 16 17 17 HOH HOH . 
L 5 HOH A 17 18 18 HOH HOH . 
L 5 HOH A 18 19 19 HOH HOH . 
L 5 HOH A 19 20 20 HOH HOH . 
L 5 HOH A 20 21 21 HOH HOH . 
L 5 HOH A 21 22 22 HOH HOH . 
L 5 HOH A 22 23 23 HOH HOH . 
L 5 HOH A 23 25 25 HOH HOH . 
L 5 HOH A 24 26 26 HOH HOH . 
L 5 HOH A 25 27 27 HOH HOH . 
L 5 HOH A 26 28 28 HOH HOH . 
L 5 HOH A 27 29 29 HOH HOH . 
L 5 HOH A 28 30 30 HOH HOH . 
L 5 HOH A 29 31 31 HOH HOH . 
L 5 HOH A 30 32 32 HOH HOH . 
L 5 HOH A 31 33 33 HOH HOH . 
L 5 HOH A 32 34 34 HOH HOH . 
L 5 HOH A 33 35 35 HOH HOH . 
L 5 HOH A 34 36 36 HOH HOH . 
L 5 HOH A 35 37 37 HOH HOH . 
L 5 HOH A 36 38 38 HOH HOH . 
L 5 HOH A 37 39 39 HOH HOH . 
L 5 HOH A 38 40 40 HOH HOH . 
L 5 HOH A 39 41 41 HOH HOH . 
L 5 HOH A 40 42 42 HOH HOH . 
L 5 HOH A 41 43 43 HOH HOH . 
L 5 HOH A 42 45 45 HOH HOH . 
L 5 HOH A 43 46 46 HOH HOH . 
L 5 HOH A 44 47 47 HOH HOH . 
L 5 HOH A 45 48 48 HOH HOH . 
L 5 HOH A 46 49 49 HOH HOH . 
L 5 HOH A 47 50 50 HOH HOH . 
L 5 HOH A 48 51 51 HOH HOH . 
L 5 HOH A 49 52 52 HOH HOH . 
L 5 HOH A 50 53 53 HOH HOH . 
L 5 HOH A 51 54 54 HOH HOH . 
L 5 HOH A 52 55 55 HOH HOH . 
L 5 HOH A 53 56 56 HOH HOH . 
L 5 HOH A 54 57 57 HOH HOH . 
L 5 HOH A 55 58 58 HOH HOH . 
L 5 HOH A 56 60 60 HOH HOH . 
L 5 HOH A 57 61 61 HOH HOH . 
L 5 HOH A 58 64 64 HOH HOH . 
L 5 HOH A 59 65 65 HOH HOH . 
L 5 HOH A 60 66 66 HOH HOH . 
L 5 HOH A 61 67 67 HOH HOH . 
L 5 HOH A 62 68 68 HOH HOH . 
L 5 HOH A 63 69 69 HOH HOH . 
L 5 HOH A 64 70 70 HOH HOH . 
L 5 HOH A 65 71 71 HOH HOH . 
L 5 HOH A 66 72 72 HOH HOH . 
L 5 HOH A 67 73 73 HOH HOH . 
L 5 HOH A 68 74 74 HOH HOH . 
L 5 HOH A 69 75 75 HOH HOH . 
L 5 HOH A 70 76 76 HOH HOH . 
L 5 HOH A 71 77 77 HOH HOH . 
L 5 HOH A 72 78 78 HOH HOH . 
L 5 HOH A 73 79 79 HOH HOH . 
L 5 HOH A 74 80 80 HOH HOH . 
L 5 HOH A 75 81 81 HOH HOH . 
L 5 HOH A 76 82 82 HOH HOH . 
L 5 HOH A 77 83 83 HOH HOH . 
L 5 HOH A 78 84 84 HOH HOH . 
L 5 HOH A 79 85 85 HOH HOH . 
L 5 HOH A 80 86 86 HOH HOH . 
L 5 HOH A 81 87 87 HOH HOH . 
L 5 HOH A 82 88 88 HOH HOH . 
L 5 HOH A 83 89 89 HOH HOH . 
L 5 HOH A 84 90 90 HOH HOH . 
L 5 HOH A 85 91 91 HOH HOH . 
L 5 HOH A 86 92 92 HOH HOH . 
L 5 HOH A 87 93 93 HOH HOH . 
L 5 HOH A 88 94 94 HOH HOH . 
L 5 HOH A 89 95 95 HOH HOH . 
L 5 HOH A 90 96 96 HOH HOH . 
L 5 HOH A 91 97 97 HOH HOH . 
L 5 HOH A 92 98 98 HOH HOH . 
L 5 HOH A 93 99 99 HOH HOH . 
L 5 HOH A 94 100 100 HOH HOH . 
L 5 HOH A 95 101 101 HOH HOH . 
L 5 HOH A 96 102 102 HOH HOH . 
L 5 HOH A 97 103 103 HOH HOH . 
L 5 HOH A 98 104 104 HOH HOH . 
L 5 HOH A 99 105 105 HOH HOH . 
L 5 HOH A 100 106 106 HOH HOH . 
L 5 HOH A 101 107 107 HOH HOH . 
L 5 HOH A 102 108 108 HOH HOH . 
L 5 HOH A 103 109 109 HOH HOH . 
L 5 HOH A 104 110 110 HOH HOH . 
L 5 HOH A 105 111 111 HOH HOH . 
L 5 HOH A 106 112 112 HOH HOH . 
L 5 HOH A 107 113 113 HOH HOH . 
L 5 HOH A 108 115 115 HOH HOH . 
L 5 HOH A 109 116 116 HOH HOH . 
L 5 HOH A 110 117 117 HOH HOH . 
L 5 HOH A 111 118 118 HOH HOH . 
L 5 HOH A 112 119 119 HOH HOH . 
L 5 HOH A 113 120 120 HOH HOH . 
L 5 HOH A 114 121 121 HOH HOH . 
L 5 HOH A 115 122 122 HOH HOH . 
L 5 HOH A 116 123 123 HOH HOH . 
L 5 HOH A 117 124 124 HOH HOH . 
L 5 HOH A 118 126 126 HOH HOH . 
L 5 HOH A 119 127 127 HOH HOH . 
L 5 HOH A 120 128 128 HOH HOH . 
L 5 HOH A 121 129 129 HOH HOH . 
L 5 HOH A 122 130 130 HOH HOH . 
L 5 HOH A 123 131 131 HOH HOH . 
L 5 HOH A 124 132 132 HOH HOH . 
L 5 HOH A 125 133 133 HOH HOH . 
L 5 HOH A 126 135 135 HOH HOH . 
L 5 HOH A 127 136 136 HOH HOH . 
L 5 HOH A 128 137 137 HOH HOH . 
L 5 HOH A 129 138 138 HOH HOH . 
L 5 HOH A 130 139 139 HOH HOH . 
L 5 HOH A 131 140 140 HOH HOH . 
L 5 HOH A 132 141 141 HOH HOH . 
L 5 HOH A 133 142 142 HOH HOH . 
L 5 HOH A 134 143 143 HOH HOH . 
L 5 HOH A 135 144 144 HOH HOH . 
L 5 HOH A 136 145 145 HOH HOH . 
L 5 HOH A 137 146 146 HOH HOH . 
L 5 HOH A 138 147 147 HOH HOH . 
L 5 HOH A 139 148 148 HOH HOH . 
L 5 HOH A 140 149 149 HOH HOH . 
L 5 HOH A 141 150 150 HOH HOH . 
L 5 HOH A 142 151 151 HOH HOH . 
L 5 HOH A 143 152 152 HOH HOH . 
L 5 HOH A 144 153 153 HOH HOH . 
L 5 HOH A 145 154 154 HOH HOH . 
L 5 HOH A 146 155 155 HOH HOH . 
L 5 HOH A 147 156 156 HOH HOH . 
L 5 HOH A 148 157 157 HOH HOH . 
L 5 HOH A 149 159 159 HOH HOH . 
L 5 HOH A 150 160 160 HOH HOH . 
L 5 HOH A 151 161 161 HOH HOH . 
L 5 HOH A 152 162 162 HOH HOH . 
L 5 HOH A 153 163 163 HOH HOH . 
L 5 HOH A 154 164 164 HOH HOH . 
L 5 HOH A 155 166 166 HOH HOH . 
L 5 HOH A 156 167 167 HOH HOH . 
L 5 HOH A 157 168 168 HOH HOH . 
L 5 HOH A 158 169 169 HOH HOH . 
L 5 HOH A 159 170 170 HOH HOH . 
L 5 HOH A 160 171 171 HOH HOH . 
L 5 HOH A 161 173 173 HOH HOH . 
L 5 HOH A 162 174 174 HOH HOH . 
L 5 HOH A 163 175 175 HOH HOH . 
L 5 HOH A 164 176 176 HOH HOH . 
L 5 HOH A 165 177 177 HOH HOH . 
L 5 HOH A 166 178 178 HOH HOH . 
L 5 HOH A 167 179 179 HOH HOH . 
L 5 HOH A 168 180 180 HOH HOH . 
L 5 HOH A 169 181 181 HOH HOH . 
L 5 HOH A 170 182 182 HOH HOH . 
L 5 HOH A 171 184 184 HOH HOH . 
L 5 HOH A 172 185 185 HOH HOH . 
L 5 HOH A 173 186 186 HOH HOH . 
L 5 HOH A 174 187 187 HOH HOH . 
L 5 HOH A 175 188 188 HOH HOH . 
L 5 HOH A 176 194 194 HOH HOH . 
L 5 HOH A 177 195 195 HOH HOH . 
L 5 HOH A 178 196 196 HOH HOH . 
L 5 HOH A 179 197 197 HOH HOH . 
L 5 HOH A 180 199 199 HOH HOH . 
L 5 HOH A 181 200 200 HOH HOH . 
L 5 HOH A 182 201 201 HOH HOH . 
L 5 HOH A 183 202 202 HOH HOH . 
L 5 HOH A 184 205 205 HOH HOH . 
L 5 HOH A 185 206 206 HOH HOH . 
L 5 HOH A 186 207 207 HOH HOH . 
L 5 HOH A 187 208 208 HOH HOH . 
L 5 HOH A 188 209 209 HOH HOH . 
L 5 HOH A 189 210 210 HOH HOH . 
L 5 HOH A 190 211 211 HOH HOH . 
L 5 HOH A 191 212 212 HOH HOH . 
L 5 HOH A 192 213 213 HOH HOH . 
L 5 HOH A 193 214 214 HOH HOH . 
L 5 HOH A 194 215 215 HOH HOH . 
L 5 HOH A 195 219 219 HOH HOH . 
L 5 HOH A 196 220 220 HOH HOH . 
L 5 HOH A 197 222 222 HOH HOH . 
L 5 HOH A 198 224 224 HOH HOH . 
L 5 HOH A 199 225 225 HOH HOH . 
L 5 HOH A 200 226 226 HOH HOH . 
L 5 HOH A 201 227 227 HOH HOH . 
L 5 HOH A 202 228 228 HOH HOH . 
L 5 HOH A 203 229 229 HOH HOH . 
L 5 HOH A 204 231 231 HOH HOH . 
L 5 HOH A 205 233 233 HOH HOH . 
L 5 HOH A 206 236 236 HOH HOH . 
L 5 HOH A 207 238 238 HOH HOH . 
L 5 HOH A 208 239 239 HOH HOH . 
L 5 HOH A 209 242 242 HOH HOH . 
L 5 HOH A 210 243 243 HOH HOH . 
L 5 HOH A 211 244 244 HOH HOH . 
L 5 HOH A 212 245 245 HOH HOH . 
L 5 HOH A 213 246 246 HOH HOH . 
L 5 HOH A 214 247 247 HOH HOH . 
L 5 HOH A 215 248 248 HOH HOH . 
L 5 HOH A 216 249 249 HOH HOH . 
L 5 HOH A 217 250 250 HOH HOH . 
L 5 HOH A 218 251 251 HOH HOH . 
L 5 HOH A 219 252 252 HOH HOH . 
L 5 HOH A 220 253 253 HOH HOH . 
L 5 HOH A 221 254 254 HOH HOH . 
L 5 HOH A 222 256 256 HOH HOH . 
L 5 HOH A 223 258 258 HOH HOH . 
L 5 HOH A 224 261 261 HOH HOH . 
L 5 HOH A 225 262 262 HOH HOH . 
L 5 HOH A 226 263 263 HOH HOH . 
L 5 HOH A 227 264 264 HOH HOH . 
L 5 HOH A 228 265 265 HOH HOH . 
L 5 HOH A 229 266 266 HOH HOH . 
L 5 HOH A 230 267 267 HOH HOH . 
L 5 HOH A 231 268 268 HOH HOH . 
L 5 HOH A 232 270 270 HOH HOH . 
L 5 HOH A 233 271 271 HOH HOH . 
L 5 HOH A 234 272 272 HOH HOH . 
L 5 HOH A 235 273 273 HOH HOH . 
L 5 HOH A 236 274 274 HOH HOH . 
L 5 HOH A 237 275 275 HOH HOH . 
L 5 HOH A 238 276 276 HOH HOH . 
L 5 HOH A 239 277 277 HOH HOH . 
M 5 HOH B 1 24 24 HOH HOH . 
M 5 HOH B 2 44 44 HOH HOH . 
M 5 HOH B 3 59 59 HOH HOH . 
M 5 HOH B 4 62 62 HOH HOH . 
M 5 HOH B 5 63 63 HOH HOH . 
M 5 HOH B 6 125 125 HOH HOH . 
M 5 HOH B 7 134 134 HOH HOH . 
M 5 HOH B 8 172 172 HOH HOH . 
M 5 HOH B 9 189 189 HOH HOH . 
M 5 HOH B 10 192 192 HOH HOH . 
M 5 HOH B 11 198 198 HOH HOH . 
M 5 HOH B 12 235 235 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . F 4 -41.765 5.541 -19.111 1 46.68 ? C1 EDO 595 A 1 
HETATM 2 O O1 EDO . . . F 4 -43.171 5.787 -19.071 1 45.67 ? O1 EDO 595 A 1 
HETATM 3 C C2 EDO . . . F 4 -41.403 4.281 -18.348 1 47.2 ? C2 EDO 595 A 1 
HETATM 4 O O2 EDO . . . F 4 -40.05 3.922 -18.675 1 48.85 ? O2 EDO 595 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           437 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#