data_2Q0X # _model_server_result.job_id TsVOK0Zf-bKmyToCBGeB2A _model_server_result.datetime_utc '2024-11-25 20:55:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2q0x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":336}' # _entry.id 2Q0X # _exptl.entry_id 2Q0X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2Q0X _cell.length_a 63.556 _cell.length_b 63.556 _cell.length_c 303.186 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Q0X _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2Q0X _atom_sites.fract_transf_matrix[1][1] 0.015734 _atom_sites.fract_transf_matrix[1][2] 0.009084 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003298 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 336 1 GOL GOL . D 2 GOL B 1 336 2 GOL GOL . E 3 HOH A 1 337 3 HOH HOH . E 3 HOH A 2 338 4 HOH HOH . E 3 HOH A 3 339 7 HOH HOH . E 3 HOH A 4 340 9 HOH HOH . E 3 HOH A 5 341 12 HOH HOH . E 3 HOH A 6 342 13 HOH HOH . E 3 HOH A 7 343 14 HOH HOH . E 3 HOH A 8 344 15 HOH HOH . E 3 HOH A 9 345 16 HOH HOH . E 3 HOH A 10 346 17 HOH HOH . E 3 HOH A 11 347 18 HOH HOH . E 3 HOH A 12 348 19 HOH HOH . E 3 HOH A 13 349 20 HOH HOH . E 3 HOH A 14 350 22 HOH HOH . E 3 HOH A 15 351 23 HOH HOH . E 3 HOH A 16 352 25 HOH HOH . E 3 HOH A 17 353 27 HOH HOH . E 3 HOH A 18 354 28 HOH HOH . E 3 HOH A 19 355 30 HOH HOH . E 3 HOH A 20 356 33 HOH HOH . E 3 HOH A 21 357 35 HOH HOH . E 3 HOH A 22 358 36 HOH HOH . E 3 HOH A 23 359 40 HOH HOH . E 3 HOH A 24 360 41 HOH HOH . E 3 HOH A 25 361 42 HOH HOH . E 3 HOH A 26 362 43 HOH HOH . E 3 HOH A 27 363 47 HOH HOH . E 3 HOH A 28 364 50 HOH HOH . E 3 HOH A 29 365 55 HOH HOH . E 3 HOH A 30 366 56 HOH HOH . E 3 HOH A 31 367 57 HOH HOH . E 3 HOH A 32 368 58 HOH HOH . E 3 HOH A 33 369 59 HOH HOH . E 3 HOH A 34 370 61 HOH HOH . E 3 HOH A 35 371 62 HOH HOH . E 3 HOH A 36 372 63 HOH HOH . E 3 HOH A 37 373 67 HOH HOH . E 3 HOH A 38 374 69 HOH HOH . E 3 HOH A 39 375 70 HOH HOH . E 3 HOH A 40 376 76 HOH HOH . E 3 HOH A 41 377 77 HOH HOH . E 3 HOH A 42 378 78 HOH HOH . E 3 HOH A 43 379 80 HOH HOH . E 3 HOH A 44 380 82 HOH HOH . E 3 HOH A 45 381 84 HOH HOH . E 3 HOH A 46 382 85 HOH HOH . E 3 HOH A 47 383 88 HOH HOH . E 3 HOH A 48 384 92 HOH HOH . E 3 HOH A 49 385 93 HOH HOH . E 3 HOH A 50 386 95 HOH HOH . E 3 HOH A 51 387 98 HOH HOH . E 3 HOH A 52 388 99 HOH HOH . E 3 HOH A 53 389 102 HOH HOH . E 3 HOH A 54 390 104 HOH HOH . E 3 HOH A 55 391 106 HOH HOH . E 3 HOH A 56 392 108 HOH HOH . E 3 HOH A 57 393 110 HOH HOH . E 3 HOH A 58 394 112 HOH HOH . E 3 HOH A 59 395 113 HOH HOH . E 3 HOH A 60 396 117 HOH HOH . E 3 HOH A 61 397 119 HOH HOH . E 3 HOH A 62 398 123 HOH HOH . E 3 HOH A 63 399 127 HOH HOH . E 3 HOH A 64 400 129 HOH HOH . E 3 HOH A 65 401 131 HOH HOH . E 3 HOH A 66 402 132 HOH HOH . E 3 HOH A 67 403 134 HOH HOH . E 3 HOH A 68 404 135 HOH HOH . F 3 HOH B 1 337 5 HOH HOH . F 3 HOH B 2 338 6 HOH HOH . F 3 HOH B 3 339 8 HOH HOH . F 3 HOH B 4 340 10 HOH HOH . F 3 HOH B 5 341 11 HOH HOH . F 3 HOH B 6 342 21 HOH HOH . F 3 HOH B 7 343 24 HOH HOH . F 3 HOH B 8 344 26 HOH HOH . F 3 HOH B 9 345 29 HOH HOH . F 3 HOH B 10 346 31 HOH HOH . F 3 HOH B 11 347 34 HOH HOH . F 3 HOH B 12 348 37 HOH HOH . F 3 HOH B 13 349 39 HOH HOH . F 3 HOH B 14 350 44 HOH HOH . F 3 HOH B 15 351 45 HOH HOH . F 3 HOH B 16 352 46 HOH HOH . F 3 HOH B 17 353 48 HOH HOH . F 3 HOH B 18 354 49 HOH HOH . F 3 HOH B 19 355 52 HOH HOH . F 3 HOH B 20 356 53 HOH HOH . F 3 HOH B 21 357 60 HOH HOH . F 3 HOH B 22 358 64 HOH HOH . F 3 HOH B 23 359 65 HOH HOH . F 3 HOH B 24 360 66 HOH HOH . F 3 HOH B 25 361 68 HOH HOH . F 3 HOH B 26 362 71 HOH HOH . F 3 HOH B 27 363 72 HOH HOH . F 3 HOH B 28 364 73 HOH HOH . F 3 HOH B 29 365 75 HOH HOH . F 3 HOH B 30 366 79 HOH HOH . F 3 HOH B 31 367 81 HOH HOH . F 3 HOH B 32 368 83 HOH HOH . F 3 HOH B 33 369 86 HOH HOH . F 3 HOH B 34 370 87 HOH HOH . F 3 HOH B 35 371 89 HOH HOH . F 3 HOH B 36 372 90 HOH HOH . F 3 HOH B 37 373 94 HOH HOH . F 3 HOH B 38 374 96 HOH HOH . F 3 HOH B 39 375 97 HOH HOH . F 3 HOH B 40 376 100 HOH HOH . F 3 HOH B 41 377 109 HOH HOH . F 3 HOH B 42 378 111 HOH HOH . F 3 HOH B 43 379 114 HOH HOH . F 3 HOH B 44 380 115 HOH HOH . F 3 HOH B 45 381 116 HOH HOH . F 3 HOH B 46 382 118 HOH HOH . F 3 HOH B 47 383 120 HOH HOH . F 3 HOH B 48 384 121 HOH HOH . F 3 HOH B 49 385 122 HOH HOH . F 3 HOH B 50 386 124 HOH HOH . F 3 HOH B 51 387 125 HOH HOH . F 3 HOH B 52 388 126 HOH HOH . F 3 HOH B 53 389 128 HOH HOH . F 3 HOH B 54 390 130 HOH HOH . F 3 HOH B 55 391 133 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 2 33.031 10.475 122.303 1 58.44 ? C1 GOL 336 B 1 HETATM 2 O O1 GOL . . . D 2 32.589 11.267 123.395 1 58.8 ? O1 GOL 336 B 1 HETATM 3 C C2 GOL . . . D 2 34.456 9.975 122.536 1 57.3 ? C2 GOL 336 B 1 HETATM 4 O O2 GOL . . . D 2 35.403 10.725 121.82 1 56.17 ? O2 GOL 336 B 1 HETATM 5 C C3 GOL . . . D 2 34.583 8.512 122.175 1 57 ? C3 GOL 336 B 1 HETATM 6 O O3 GOL . . . D 2 35.918 8.09 122.343 1 57.55 ? O3 GOL 336 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #