data_2Q1N
#
_model_server_result.job_id            s4BzEeMgBrxneHUgWIAIqQ 
_model_server_result.datetime_utc      '2024-11-15 19:35:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2q1n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":403}' 
#
_entry.id    2Q1N 
#
_exptl.entry_id    2Q1N 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              421.55 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'LATRUNCULIN A' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.7 
_cell.angle_gamma         90 
_cell.entry_id            2Q1N 
_cell.length_a            108.057 
_cell.length_b            71.813 
_cell.length_c            54.787 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2Q1N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,K 1 1,2 
B,G,H,I,J,L 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 1_554 x,y,z-1 1 0 0 0 1 0 0 0 1 13.902637 0 -52.993698 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLN 263 A GLN 263 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.77 ? 
metalc ? metalc2 A OG SER 265 A SER 265 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.78 ? 
metalc ? metalc3 E O1G ANP . A ANP 400 1_555 C CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.082 ? 
metalc ? metalc4 E O2G ANP . A ANP 400 1_555 C CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? 
metalc ? metalc5 E O1B ANP . A ANP 400 1_555 C CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc6 C CA CA . A CA 401 1_555 K O HOH . A HOH 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.684 ? 
metalc ? metalc7 D CA CA . A CA 402 1_555 K O HOH . A HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.736 ? 
metalc ? metalc8 B OE1 GLN 263 B GLN 263 1_555 H CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? 
metalc ? metalc9 B OG SER 265 B SER 265 1_555 H CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? 
metalc ? metalc10 I O2G ANP . B ANP 400 1_555 G CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc11 I O1B ANP . B ANP 400 1_555 G CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? 
#
_chem_comp.formula           'C22 H31 N O5 S' 
_chem_comp.formula_weight    421.55 
_chem_comp.id                LAR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'LATRUNCULIN A' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     4-(17-HYDROXY-5,12-DIMETHYL-3-OXO-2,16-DIOXABICYCLO[13.3.1]NONADECA-4,8,10-TRIEN-17-YL)-2-THIAZOLIDINONE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S1 C19 LAR sing 223 n n 
S1 C20 LAR sing 224 n n 
N1 C18 LAR sing 225 n n 
N1 C20 LAR sing 226 n n 
N1 HN1 LAR sing 227 n n 
O1 C1 LAR doub 228 n n 
O2 C1 LAR sing 229 n n 
O2 C15 LAR sing 230 n n 
O3 C13 LAR sing 231 n n 
O3 C17 LAR sing 232 n n 
O4 C17 LAR sing 233 n n 
O4 HO4 LAR sing 234 n n 
O5 C20 LAR doub 235 n n 
C1 C2 LAR sing 236 n n 
C2 C3 LAR doub 237 z n 
C2 H21 LAR sing 238 n n 
C3 C4 LAR sing 239 n n 
C3 C21 LAR sing 240 n n 
C4 C5 LAR sing 241 n n 
C4 H41 LAR sing 242 n n 
C4 H42 LAR sing 243 n n 
C5 C6 LAR sing 244 n n 
C5 H51 LAR sing 245 n n 
C5 H52 LAR sing 246 n n 
C6 C7 LAR doub 247 e n 
C6 H61 LAR sing 248 n n 
C7 C8 LAR sing 249 n n 
C7 H71 LAR sing 250 n n 
C8 C9 LAR doub 251 z n 
C8 H81 LAR sing 252 n n 
C9 C10 LAR sing 253 n n 
C9 H91 LAR sing 254 n n 
C10 C11 LAR sing 255 n n 
C10 C22 LAR sing 256 n n 
C10 H101 LAR sing 257 n n 
C11 C12 LAR sing 258 n n 
C11 H111 LAR sing 259 n n 
C11 H112 LAR sing 260 n n 
C12 C13 LAR sing 261 n n 
C12 H121 LAR sing 262 n n 
C12 H122 LAR sing 263 n n 
C13 C14 LAR sing 264 n n 
C13 H131 LAR sing 265 n n 
C14 C15 LAR sing 266 n n 
C14 H141 LAR sing 267 n n 
C14 H142 LAR sing 268 n n 
C15 C16 LAR sing 269 n n 
C15 H151 LAR sing 270 n n 
C16 C17 LAR sing 271 n n 
C16 H161 LAR sing 272 n n 
C16 H162 LAR sing 273 n n 
C17 C18 LAR sing 274 n n 
C18 C19 LAR sing 275 n n 
C18 H181 LAR sing 276 n n 
C19 H191 LAR sing 277 n n 
C19 H192 LAR sing 278 n n 
C21 H211 LAR sing 279 n n 
C21 H212 LAR sing 280 n n 
C21 H213 LAR sing 281 n n 
C22 H221 LAR sing 282 n n 
C22 H222 LAR sing 283 n n 
C22 H223 LAR sing 284 n n 
#
_atom_sites.entry_id                     2Q1N 
_atom_sites.fract_transf_matrix[1][1]    0.009254 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002429 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013925 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018871 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CA A 1 401 401 CA CA . 
D 2 CA A 1 402 402 CA CA . 
E 3 ANP A 1 400 400 ANP ANP . 
F 4 LAR A 1 403 403 LAR LAR . 
G 2 CA B 1 401 401 CA CA . 
H 2 CA B 1 402 402 CA CA . 
I 3 ANP B 1 400 400 ANP ANP . 
J 4 LAR B 1 403 403 LAR LAR . 
K 5 HOH A 1 404 2 HOH HOH . 
K 5 HOH A 2 405 4 HOH HOH . 
K 5 HOH A 3 406 8 HOH HOH . 
K 5 HOH A 4 407 11 HOH HOH . 
K 5 HOH A 5 408 12 HOH HOH . 
K 5 HOH A 6 409 13 HOH HOH . 
K 5 HOH A 7 410 14 HOH HOH . 
K 5 HOH A 8 411 20 HOH HOH . 
K 5 HOH A 9 412 21 HOH HOH . 
L 5 HOH B 1 404 1 HOH HOH . 
L 5 HOH B 2 405 3 HOH HOH . 
L 5 HOH B 3 406 5 HOH HOH . 
L 5 HOH B 4 407 6 HOH HOH . 
L 5 HOH B 5 408 7 HOH HOH . 
L 5 HOH B 6 409 9 HOH HOH . 
L 5 HOH B 7 410 10 HOH HOH . 
L 5 HOH B 8 411 15 HOH HOH . 
L 5 HOH B 9 412 16 HOH HOH . 
L 5 HOH B 10 413 17 HOH HOH . 
L 5 HOH B 11 414 18 HOH HOH . 
L 5 HOH B 12 415 19 HOH HOH . 
L 5 HOH B 13 416 22 HOH HOH . 
L 5 HOH B 14 417 23 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 LAR . . . J 4 15.405 0.821 10.776 1 51.75 ? S1 LAR 403 B 1 
HETATM 2 N N1 LAR . . . J 4 13.493 1.284 12.365 1 51.57 ? N1 LAR 403 B 1 
HETATM 3 O O1 LAR . . . J 4 10.092 -2.276 13.04 1 60.07 ? O1 LAR 403 B 1 
HETATM 4 O O2 LAR . . . J 4 10.025 -1.76 10.785 1 56.74 ? O2 LAR 403 B 1 
HETATM 5 O O3 LAR . . . J 4 11.284 1.274 9.396 1 58.75 ? O3 LAR 403 B 1 
HETATM 6 O O4 LAR . . . J 4 12.671 -0.462 10.081 1 56.63 ? O4 LAR 403 B 1 
HETATM 7 O O5 LAR . . . J 4 15.307 0.262 13.228 1 51.19 ? O5 LAR 403 B 1 
HETATM 8 C C1 LAR . . . J 4 10.009 -2.703 11.893 1 56.26 ? C1 LAR 403 B 1 
HETATM 9 C C2 LAR . . . J 4 9.935 -4.164 11.659 1 54.03 ? C2 LAR 403 B 1 
HETATM 10 C C3 LAR . . . J 4 9.921 -4.772 10.452 1 52.97 ? C3 LAR 403 B 1 
HETATM 11 C C4 LAR . . . J 4 9.967 -4.071 9.112 1 55.98 ? C4 LAR 403 B 1 
HETATM 12 C C5 LAR . . . J 4 8.58 -3.643 8.637 1 56.79 ? C5 LAR 403 B 1 
HETATM 13 C C6 LAR . . . J 4 8.606 -3.466 7.127 1 56.98 ? C6 LAR 403 B 1 
HETATM 14 C C7 LAR . . . J 4 8.878 -2.302 6.626 1 56.56 ? C7 LAR 403 B 1 
HETATM 15 C C8 LAR . . . J 4 9.259 -1.635 5.55 1 55.64 ? C8 LAR 403 B 1 
HETATM 16 C C9 LAR . . . J 4 9.546 -0.388 5.182 1 57.03 ? C9 LAR 403 B 1 
HETATM 17 C C10 LAR . . . J 4 10.837 0.224 5.697 1 58.93 ? C10 LAR 403 B 1 
HETATM 18 C C11 LAR . . . J 4 10.572 1.497 6.495 1 58.18 ? C11 LAR 403 B 1 
HETATM 19 C C12 LAR . . . J 4 9.623 1.259 7.665 1 56.32 ? C12 LAR 403 B 1 
HETATM 20 C C13 LAR . . . J 4 10.249 0.491 8.819 1 55.34 ? C13 LAR 403 B 1 
HETATM 21 C C14 LAR . . . J 4 9.166 0.259 9.855 1 56.51 ? C14 LAR 403 B 1 
HETATM 22 C C15 LAR . . . J 4 9.707 -0.409 11.104 1 55.47 ? C15 LAR 403 B 1 
HETATM 23 C C16 LAR . . . J 4 10.928 0.348 11.611 1 56.13 ? C16 LAR 403 B 1 
HETATM 24 C C17 LAR . . . J 4 11.948 0.697 10.528 1 56.79 ? C17 LAR 403 B 1 
HETATM 25 C C18 LAR . . . J 4 12.919 1.733 11.114 1 54.74 ? C18 LAR 403 B 1 
HETATM 26 C C19 LAR . . . J 4 14.16 1.956 10.257 1 55.87 ? C19 LAR 403 B 1 
HETATM 27 C C20 LAR . . . J 4 14.71 0.763 12.284 1 53.96 ? C20 LAR 403 B 1 
HETATM 28 C C21 LAR . . . J 4 9.861 -6.27 10.421 1 52.78 ? C21 LAR 403 B 1 
HETATM 29 C C22 LAR . . . J 4 11.772 0.53 4.532 1 60.33 ? C22 LAR 403 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           29 
#