data_2Q22 # _model_server_result.job_id 7RErb4l3jst_ZQ5QzQlnmQ _model_server_result.datetime_utc '2025-02-05 13:52:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2q22 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":140}' # _entry.id 2Q22 # _exptl.entry_id 2Q22 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2Q22 _cell.length_a 103.374 _cell.length_b 103.374 _cell.length_c 42.086 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Q22 _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,O 1 1 B,H,I,J,K,P 2 1 C,L,M,N,Q 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 M N N ? 5 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 68 A ALA 67 1_555 A N MSE 69 A MSE 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale2 A C MSE 69 A MSE 68 1_555 A N LYS 70 A LYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 A C GLU 128 A GLU 127 1_555 A N MSE 129 A MSE 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C MSE 129 A MSE 128 1_555 A N TYR 130 A TYR 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale5 B C ALA 68 B ALA 67 1_555 B N MSE 69 B MSE 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale6 B C MSE 69 B MSE 68 1_555 B N LYS 70 B LYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale7 B C GLU 128 B GLU 127 1_555 B N MSE 129 B MSE 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale8 B C MSE 129 B MSE 128 1_555 B N TYR 130 B TYR 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale9 C C ALA 68 C ALA 67 1_555 C N MSE 69 C MSE 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale10 C C MSE 69 C MSE 68 1_555 C N LYS 70 C LYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale11 C C GLU 128 C GLU 127 1_555 C N MSE 129 C MSE 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale12 C C MSE 129 C MSE 128 1_555 C N TYR 130 C TYR 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 89 n n C1 C2 EDO sing 90 n n C1 H11 EDO sing 91 n n C1 H12 EDO sing 92 n n O1 HO1 EDO sing 93 n n C2 O2 EDO sing 94 n n C2 H21 EDO sing 95 n n C2 H22 EDO sing 96 n n O2 HO2 EDO sing 97 n n # _atom_sites.entry_id 2Q22 _atom_sites.fract_transf_matrix[1][1] 0.009674 _atom_sites.fract_transf_matrix[1][2] 0.005585 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01117 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023761 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ACT A 1 139 3 ACT ACT . E 2 ACT A 1 140 4 ACT ACT . F 3 CL A 1 141 5 CL CL . G 4 PG4 A 1 142 9 PG4 PG4 . H 2 ACT B 1 139 1 ACT ACT . I 3 CL B 1 140 6 CL CL . J 3 CL B 1 141 7 CL CL . K 4 PG4 B 1 142 8 PG4 PG4 . L 2 ACT C 1 139 2 ACT ACT . M 5 EDO C 1 140 10 EDO EDO . N 5 EDO C 1 141 11 EDO EDO . O 6 HOH A 1 143 12 HOH HOH . O 6 HOH A 2 144 14 HOH HOH . O 6 HOH A 3 145 18 HOH HOH . O 6 HOH A 4 146 20 HOH HOH . O 6 HOH A 5 147 21 HOH HOH . O 6 HOH A 6 148 22 HOH HOH . O 6 HOH A 7 149 24 HOH HOH . O 6 HOH A 8 150 26 HOH HOH . O 6 HOH A 9 151 28 HOH HOH . O 6 HOH A 10 152 30 HOH HOH . O 6 HOH A 11 153 32 HOH HOH . O 6 HOH A 12 154 34 HOH HOH . O 6 HOH A 13 155 35 HOH HOH . O 6 HOH A 14 156 36 HOH HOH . O 6 HOH A 15 157 39 HOH HOH . O 6 HOH A 16 158 41 HOH HOH . O 6 HOH A 17 159 44 HOH HOH . O 6 HOH A 18 160 47 HOH HOH . O 6 HOH A 19 161 48 HOH HOH . O 6 HOH A 20 162 49 HOH HOH . O 6 HOH A 21 163 56 HOH HOH . O 6 HOH A 22 164 57 HOH HOH . O 6 HOH A 23 165 61 HOH HOH . O 6 HOH A 24 166 63 HOH HOH . O 6 HOH A 25 167 64 HOH HOH . O 6 HOH A 26 168 65 HOH HOH . O 6 HOH A 27 169 72 HOH HOH . O 6 HOH A 28 170 73 HOH HOH . O 6 HOH A 29 171 77 HOH HOH . O 6 HOH A 30 172 80 HOH HOH . O 6 HOH A 31 173 82 HOH HOH . O 6 HOH A 32 174 84 HOH HOH . O 6 HOH A 33 175 85 HOH HOH . O 6 HOH A 34 176 88 HOH HOH . O 6 HOH A 35 177 90 HOH HOH . O 6 HOH A 36 178 91 HOH HOH . O 6 HOH A 37 179 92 HOH HOH . O 6 HOH A 38 180 93 HOH HOH . O 6 HOH A 39 181 96 HOH HOH . O 6 HOH A 40 182 98 HOH HOH . O 6 HOH A 41 183 100 HOH HOH . O 6 HOH A 42 184 105 HOH HOH . O 6 HOH A 43 185 106 HOH HOH . O 6 HOH A 44 186 113 HOH HOH . O 6 HOH A 45 187 116 HOH HOH . O 6 HOH A 46 188 117 HOH HOH . O 6 HOH A 47 189 118 HOH HOH . O 6 HOH A 48 190 119 HOH HOH . O 6 HOH A 49 191 122 HOH HOH . O 6 HOH A 50 192 124 HOH HOH . O 6 HOH A 51 193 126 HOH HOH . O 6 HOH A 52 194 129 HOH HOH . O 6 HOH A 53 195 131 HOH HOH . O 6 HOH A 54 196 132 HOH HOH . O 6 HOH A 55 197 134 HOH HOH . O 6 HOH A 56 198 137 HOH HOH . O 6 HOH A 57 199 139 HOH HOH . O 6 HOH A 58 200 145 HOH HOH . O 6 HOH A 59 201 147 HOH HOH . O 6 HOH A 60 202 149 HOH HOH . O 6 HOH A 61 203 150 HOH HOH . O 6 HOH A 62 204 153 HOH HOH . O 6 HOH A 63 205 158 HOH HOH . O 6 HOH A 64 206 160 HOH HOH . O 6 HOH A 65 207 161 HOH HOH . O 6 HOH A 66 208 162 HOH HOH . O 6 HOH A 67 209 164 HOH HOH . O 6 HOH A 68 210 169 HOH HOH . O 6 HOH A 69 211 170 HOH HOH . O 6 HOH A 70 212 171 HOH HOH . O 6 HOH A 71 213 173 HOH HOH . O 6 HOH A 72 214 175 HOH HOH . O 6 HOH A 73 215 176 HOH HOH . O 6 HOH A 74 216 183 HOH HOH . O 6 HOH A 75 217 186 HOH HOH . O 6 HOH A 76 218 188 HOH HOH . O 6 HOH A 77 219 189 HOH HOH . O 6 HOH A 78 220 190 HOH HOH . P 6 HOH B 1 143 13 HOH HOH . P 6 HOH B 2 144 17 HOH HOH . P 6 HOH B 3 145 23 HOH HOH . P 6 HOH B 4 146 25 HOH HOH . P 6 HOH B 5 147 27 HOH HOH . P 6 HOH B 6 148 38 HOH HOH . P 6 HOH B 7 149 40 HOH HOH . P 6 HOH B 8 150 42 HOH HOH . P 6 HOH B 9 151 43 HOH HOH . P 6 HOH B 10 152 46 HOH HOH . P 6 HOH B 11 153 50 HOH HOH . P 6 HOH B 12 154 54 HOH HOH . P 6 HOH B 13 155 55 HOH HOH . P 6 HOH B 14 156 58 HOH HOH . P 6 HOH B 15 157 62 HOH HOH . P 6 HOH B 16 158 66 HOH HOH . P 6 HOH B 17 159 68 HOH HOH . P 6 HOH B 18 160 70 HOH HOH . P 6 HOH B 19 161 75 HOH HOH . P 6 HOH B 20 162 76 HOH HOH . P 6 HOH B 21 163 81 HOH HOH . P 6 HOH B 22 164 83 HOH HOH . P 6 HOH B 23 165 87 HOH HOH . P 6 HOH B 24 166 94 HOH HOH . P 6 HOH B 25 167 97 HOH HOH . P 6 HOH B 26 168 99 HOH HOH . P 6 HOH B 27 169 102 HOH HOH . P 6 HOH B 28 170 103 HOH HOH . P 6 HOH B 29 171 104 HOH HOH . P 6 HOH B 30 172 107 HOH HOH . P 6 HOH B 31 173 108 HOH HOH . P 6 HOH B 32 174 110 HOH HOH . P 6 HOH B 33 175 112 HOH HOH . P 6 HOH B 34 176 114 HOH HOH . P 6 HOH B 35 177 115 HOH HOH . P 6 HOH B 36 178 121 HOH HOH . P 6 HOH B 37 179 128 HOH HOH . P 6 HOH B 38 180 130 HOH HOH . P 6 HOH B 39 181 136 HOH HOH . P 6 HOH B 40 182 140 HOH HOH . P 6 HOH B 41 183 144 HOH HOH . P 6 HOH B 42 184 154 HOH HOH . P 6 HOH B 43 185 155 HOH HOH . P 6 HOH B 44 186 157 HOH HOH . P 6 HOH B 45 187 159 HOH HOH . P 6 HOH B 46 188 163 HOH HOH . P 6 HOH B 47 189 168 HOH HOH . P 6 HOH B 48 190 184 HOH HOH . P 6 HOH B 49 191 185 HOH HOH . P 6 HOH B 50 192 191 HOH HOH . P 6 HOH B 51 193 192 HOH HOH . P 6 HOH B 52 194 193 HOH HOH . P 6 HOH B 53 195 196 HOH HOH . P 6 HOH B 54 196 199 HOH HOH . P 6 HOH B 55 197 201 HOH HOH . Q 6 HOH C 1 142 15 HOH HOH . Q 6 HOH C 2 143 16 HOH HOH . Q 6 HOH C 3 144 19 HOH HOH . Q 6 HOH C 4 145 29 HOH HOH . Q 6 HOH C 5 146 31 HOH HOH . Q 6 HOH C 6 147 33 HOH HOH . Q 6 HOH C 7 148 37 HOH HOH . Q 6 HOH C 8 149 45 HOH HOH . Q 6 HOH C 9 150 51 HOH HOH . Q 6 HOH C 10 151 52 HOH HOH . Q 6 HOH C 11 152 53 HOH HOH . Q 6 HOH C 12 153 59 HOH HOH . Q 6 HOH C 13 154 60 HOH HOH . Q 6 HOH C 14 155 67 HOH HOH . Q 6 HOH C 15 156 69 HOH HOH . Q 6 HOH C 16 157 71 HOH HOH . Q 6 HOH C 17 158 74 HOH HOH . Q 6 HOH C 18 159 78 HOH HOH . Q 6 HOH C 19 160 79 HOH HOH . Q 6 HOH C 20 161 86 HOH HOH . Q 6 HOH C 21 162 89 HOH HOH . Q 6 HOH C 22 163 95 HOH HOH . Q 6 HOH C 23 164 101 HOH HOH . Q 6 HOH C 24 165 109 HOH HOH . Q 6 HOH C 25 166 111 HOH HOH . Q 6 HOH C 26 167 120 HOH HOH . Q 6 HOH C 27 168 123 HOH HOH . Q 6 HOH C 28 169 125 HOH HOH . Q 6 HOH C 29 170 127 HOH HOH . Q 6 HOH C 30 171 133 HOH HOH . Q 6 HOH C 31 172 135 HOH HOH . Q 6 HOH C 32 173 138 HOH HOH . Q 6 HOH C 33 174 141 HOH HOH . Q 6 HOH C 34 175 142 HOH HOH . Q 6 HOH C 35 176 143 HOH HOH . Q 6 HOH C 36 177 146 HOH HOH . Q 6 HOH C 37 178 148 HOH HOH . Q 6 HOH C 38 179 151 HOH HOH . Q 6 HOH C 39 180 152 HOH HOH . Q 6 HOH C 40 181 156 HOH HOH . Q 6 HOH C 41 182 165 HOH HOH . Q 6 HOH C 42 183 166 HOH HOH . Q 6 HOH C 43 184 167 HOH HOH . Q 6 HOH C 44 185 172 HOH HOH . Q 6 HOH C 45 186 174 HOH HOH . Q 6 HOH C 46 187 177 HOH HOH . Q 6 HOH C 47 188 178 HOH HOH . Q 6 HOH C 48 189 179 HOH HOH . Q 6 HOH C 49 190 180 HOH HOH . Q 6 HOH C 50 191 181 HOH HOH . Q 6 HOH C 51 192 182 HOH HOH . Q 6 HOH C 52 193 187 HOH HOH . Q 6 HOH C 53 194 194 HOH HOH . Q 6 HOH C 54 195 195 HOH HOH . Q 6 HOH C 55 196 197 HOH HOH . Q 6 HOH C 56 197 198 HOH HOH . Q 6 HOH C 57 198 200 HOH HOH . Q 6 HOH C 58 199 202 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . M 5 8.569 6.02 17.809 1 62.74 ? C1 EDO 140 C 1 HETATM 2 O O1 EDO . . . M 5 9.72 5.322 17.309 1 66.47 ? O1 EDO 140 C 1 HETATM 3 C C2 EDO . . . M 5 7.575 4.975 18.331 1 61.56 ? C2 EDO 140 C 1 HETATM 4 O O2 EDO . . . M 5 6.896 5.332 19.554 1 56.7 ? O2 EDO 140 C 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 4 #