data_2Q2Y # _model_server_result.job_id STK6Gz9VaVc2yhDH-zMN7g _model_server_result.datetime_utc '2024-11-22 15:22:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2q2y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":604}' # _entry.id 2Q2Y # _exptl.entry_id 2Q2Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2Q2Y _cell.length_a 68.86 _cell.length_b 79.8 _cell.length_c 159.57 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Q2Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 111 A THR 112 1_555 C MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc2 D O3B ADP . A ADP 601 1_555 C MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc3 B OG1 THR 111 B THR 112 1_555 F MG MG . B MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc4 G O3B ADP . B ADP 602 1_555 F MG MG . B MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2Q2Y _atom_sites.fract_transf_matrix[1][1] 0.014522 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012531 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006267 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 603 603 MG MG . D 3 ADP A 1 601 601 ADP ADP . E 4 MKR A 1 604 301 MKR MKR . F 2 MG B 1 604 604 MG MG . G 3 ADP B 1 602 602 ADP ADP . H 4 MKR B 1 605 302 MKR MKR . I 5 HOH A 1 605 1 HOH HOH . I 5 HOH A 2 606 2 HOH HOH . I 5 HOH A 3 607 5 HOH HOH . I 5 HOH A 4 608 7 HOH HOH . I 5 HOH A 5 609 10 HOH HOH . I 5 HOH A 6 610 11 HOH HOH . I 5 HOH A 7 611 12 HOH HOH . I 5 HOH A 8 612 13 HOH HOH . I 5 HOH A 9 613 15 HOH HOH . I 5 HOH A 10 614 17 HOH HOH . I 5 HOH A 11 615 23 HOH HOH . I 5 HOH A 12 616 24 HOH HOH . I 5 HOH A 13 617 26 HOH HOH . I 5 HOH A 14 618 28 HOH HOH . I 5 HOH A 15 619 29 HOH HOH . I 5 HOH A 16 620 30 HOH HOH . I 5 HOH A 17 621 31 HOH HOH . I 5 HOH A 18 622 35 HOH HOH . I 5 HOH A 19 623 36 HOH HOH . I 5 HOH A 20 624 37 HOH HOH . I 5 HOH A 21 625 39 HOH HOH . I 5 HOH A 22 626 40 HOH HOH . I 5 HOH A 23 627 41 HOH HOH . I 5 HOH A 24 628 45 HOH HOH . I 5 HOH A 25 629 46 HOH HOH . I 5 HOH A 26 630 48 HOH HOH . I 5 HOH A 27 631 49 HOH HOH . I 5 HOH A 28 632 50 HOH HOH . I 5 HOH A 29 633 53 HOH HOH . I 5 HOH A 30 634 54 HOH HOH . I 5 HOH A 31 635 55 HOH HOH . I 5 HOH A 32 636 56 HOH HOH . I 5 HOH A 33 637 58 HOH HOH . I 5 HOH A 34 638 59 HOH HOH . I 5 HOH A 35 639 60 HOH HOH . I 5 HOH A 36 640 64 HOH HOH . I 5 HOH A 37 641 66 HOH HOH . I 5 HOH A 38 642 69 HOH HOH . I 5 HOH A 39 643 70 HOH HOH . I 5 HOH A 40 644 71 HOH HOH . I 5 HOH A 41 645 73 HOH HOH . I 5 HOH A 42 646 75 HOH HOH . I 5 HOH A 43 647 76 HOH HOH . I 5 HOH A 44 648 77 HOH HOH . I 5 HOH A 45 649 78 HOH HOH . I 5 HOH A 46 650 79 HOH HOH . I 5 HOH A 47 651 85 HOH HOH . I 5 HOH A 48 652 86 HOH HOH . I 5 HOH A 49 653 93 HOH HOH . I 5 HOH A 50 654 96 HOH HOH . I 5 HOH A 51 655 97 HOH HOH . I 5 HOH A 52 656 99 HOH HOH . I 5 HOH A 53 657 100 HOH HOH . I 5 HOH A 54 658 103 HOH HOH . I 5 HOH A 55 659 106 HOH HOH . I 5 HOH A 56 660 108 HOH HOH . I 5 HOH A 57 661 110 HOH HOH . I 5 HOH A 58 662 112 HOH HOH . I 5 HOH A 59 663 113 HOH HOH . I 5 HOH A 60 664 115 HOH HOH . I 5 HOH A 61 665 116 HOH HOH . I 5 HOH A 62 666 117 HOH HOH . I 5 HOH A 63 667 118 HOH HOH . I 5 HOH A 64 668 121 HOH HOH . I 5 HOH A 65 669 122 HOH HOH . I 5 HOH A 66 670 128 HOH HOH . I 5 HOH A 67 671 132 HOH HOH . I 5 HOH A 68 672 133 HOH HOH . I 5 HOH A 69 673 134 HOH HOH . I 5 HOH A 70 674 135 HOH HOH . I 5 HOH A 71 675 136 HOH HOH . I 5 HOH A 72 676 139 HOH HOH . I 5 HOH A 73 677 140 HOH HOH . I 5 HOH A 74 678 142 HOH HOH . I 5 HOH A 75 679 143 HOH HOH . I 5 HOH A 76 680 144 HOH HOH . I 5 HOH A 77 681 145 HOH HOH . I 5 HOH A 78 682 147 HOH HOH . I 5 HOH A 79 683 149 HOH HOH . I 5 HOH A 80 684 151 HOH HOH . I 5 HOH A 81 685 152 HOH HOH . I 5 HOH A 82 686 156 HOH HOH . I 5 HOH A 83 687 157 HOH HOH . I 5 HOH A 84 688 159 HOH HOH . I 5 HOH A 85 689 160 HOH HOH . I 5 HOH A 86 690 161 HOH HOH . I 5 HOH A 87 691 162 HOH HOH . I 5 HOH A 88 692 165 HOH HOH . I 5 HOH A 89 693 166 HOH HOH . I 5 HOH A 90 694 167 HOH HOH . I 5 HOH A 91 695 170 HOH HOH . I 5 HOH A 92 696 171 HOH HOH . I 5 HOH A 93 697 174 HOH HOH . I 5 HOH A 94 698 176 HOH HOH . I 5 HOH A 95 699 177 HOH HOH . I 5 HOH A 96 700 178 HOH HOH . I 5 HOH A 97 701 180 HOH HOH . I 5 HOH A 98 702 181 HOH HOH . I 5 HOH A 99 703 183 HOH HOH . I 5 HOH A 100 704 184 HOH HOH . I 5 HOH A 101 705 186 HOH HOH . I 5 HOH A 102 706 187 HOH HOH . I 5 HOH A 103 707 188 HOH HOH . I 5 HOH A 104 708 192 HOH HOH . I 5 HOH A 105 709 193 HOH HOH . I 5 HOH A 106 710 195 HOH HOH . I 5 HOH A 107 711 200 HOH HOH . I 5 HOH A 108 712 202 HOH HOH . I 5 HOH A 109 713 204 HOH HOH . I 5 HOH A 110 714 205 HOH HOH . I 5 HOH A 111 715 211 HOH HOH . I 5 HOH A 112 716 217 HOH HOH . I 5 HOH A 113 717 218 HOH HOH . I 5 HOH A 114 718 221 HOH HOH . I 5 HOH A 115 719 222 HOH HOH . I 5 HOH A 116 720 226 HOH HOH . I 5 HOH A 117 721 233 HOH HOH . I 5 HOH A 118 722 234 HOH HOH . I 5 HOH A 119 723 235 HOH HOH . I 5 HOH A 120 724 236 HOH HOH . I 5 HOH A 121 725 237 HOH HOH . I 5 HOH A 122 726 238 HOH HOH . I 5 HOH A 123 727 241 HOH HOH . I 5 HOH A 124 728 242 HOH HOH . I 5 HOH A 125 729 244 HOH HOH . I 5 HOH A 126 730 245 HOH HOH . J 5 HOH B 1 606 3 HOH HOH . J 5 HOH B 2 607 4 HOH HOH . J 5 HOH B 3 608 6 HOH HOH . J 5 HOH B 4 609 8 HOH HOH . J 5 HOH B 5 610 9 HOH HOH . J 5 HOH B 6 611 14 HOH HOH . J 5 HOH B 7 612 16 HOH HOH . J 5 HOH B 8 613 18 HOH HOH . J 5 HOH B 9 614 19 HOH HOH . J 5 HOH B 10 615 20 HOH HOH . J 5 HOH B 11 616 21 HOH HOH . J 5 HOH B 12 617 22 HOH HOH . J 5 HOH B 13 618 25 HOH HOH . J 5 HOH B 14 619 27 HOH HOH . J 5 HOH B 15 620 32 HOH HOH . J 5 HOH B 16 621 33 HOH HOH . J 5 HOH B 17 622 34 HOH HOH . J 5 HOH B 18 623 38 HOH HOH . J 5 HOH B 19 624 42 HOH HOH . J 5 HOH B 20 625 43 HOH HOH . J 5 HOH B 21 626 44 HOH HOH . J 5 HOH B 22 627 47 HOH HOH . J 5 HOH B 23 628 51 HOH HOH . J 5 HOH B 24 629 52 HOH HOH . J 5 HOH B 25 630 57 HOH HOH . J 5 HOH B 26 631 61 HOH HOH . J 5 HOH B 27 632 62 HOH HOH . J 5 HOH B 28 633 63 HOH HOH . J 5 HOH B 29 634 65 HOH HOH . J 5 HOH B 30 635 67 HOH HOH . J 5 HOH B 31 636 68 HOH HOH . J 5 HOH B 32 637 72 HOH HOH . J 5 HOH B 33 638 74 HOH HOH . J 5 HOH B 34 639 80 HOH HOH . J 5 HOH B 35 640 81 HOH HOH . J 5 HOH B 36 641 82 HOH HOH . J 5 HOH B 37 642 83 HOH HOH . J 5 HOH B 38 643 84 HOH HOH . J 5 HOH B 39 644 87 HOH HOH . J 5 HOH B 40 645 88 HOH HOH . J 5 HOH B 41 646 89 HOH HOH . J 5 HOH B 42 647 90 HOH HOH . J 5 HOH B 43 648 91 HOH HOH . J 5 HOH B 44 649 92 HOH HOH . J 5 HOH B 45 650 94 HOH HOH . J 5 HOH B 46 651 95 HOH HOH . J 5 HOH B 47 652 98 HOH HOH . J 5 HOH B 48 653 101 HOH HOH . J 5 HOH B 49 654 102 HOH HOH . J 5 HOH B 50 655 104 HOH HOH . J 5 HOH B 51 656 105 HOH HOH . J 5 HOH B 52 657 107 HOH HOH . J 5 HOH B 53 658 109 HOH HOH . J 5 HOH B 54 659 111 HOH HOH . J 5 HOH B 55 660 114 HOH HOH . J 5 HOH B 56 661 119 HOH HOH . J 5 HOH B 57 662 120 HOH HOH . J 5 HOH B 58 663 123 HOH HOH . J 5 HOH B 59 664 124 HOH HOH . J 5 HOH B 60 665 125 HOH HOH . J 5 HOH B 61 666 126 HOH HOH . J 5 HOH B 62 667 127 HOH HOH . J 5 HOH B 63 668 129 HOH HOH . J 5 HOH B 64 669 130 HOH HOH . J 5 HOH B 65 670 131 HOH HOH . J 5 HOH B 66 671 137 HOH HOH . J 5 HOH B 67 672 138 HOH HOH . J 5 HOH B 68 673 141 HOH HOH . J 5 HOH B 69 674 146 HOH HOH . J 5 HOH B 70 675 148 HOH HOH . J 5 HOH B 71 676 150 HOH HOH . J 5 HOH B 72 677 153 HOH HOH . J 5 HOH B 73 678 154 HOH HOH . J 5 HOH B 74 679 155 HOH HOH . J 5 HOH B 75 680 158 HOH HOH . J 5 HOH B 76 681 163 HOH HOH . J 5 HOH B 77 682 164 HOH HOH . J 5 HOH B 78 683 168 HOH HOH . J 5 HOH B 79 684 169 HOH HOH . J 5 HOH B 80 685 172 HOH HOH . J 5 HOH B 81 686 173 HOH HOH . J 5 HOH B 82 687 175 HOH HOH . J 5 HOH B 83 688 179 HOH HOH . J 5 HOH B 84 689 182 HOH HOH . J 5 HOH B 85 690 185 HOH HOH . J 5 HOH B 86 691 189 HOH HOH . J 5 HOH B 87 692 190 HOH HOH . J 5 HOH B 88 693 191 HOH HOH . J 5 HOH B 89 694 194 HOH HOH . J 5 HOH B 90 695 196 HOH HOH . J 5 HOH B 91 696 197 HOH HOH . J 5 HOH B 92 697 198 HOH HOH . J 5 HOH B 93 698 199 HOH HOH . J 5 HOH B 94 699 201 HOH HOH . J 5 HOH B 95 700 203 HOH HOH . J 5 HOH B 96 701 206 HOH HOH . J 5 HOH B 97 702 207 HOH HOH . J 5 HOH B 98 703 208 HOH HOH . J 5 HOH B 99 704 209 HOH HOH . J 5 HOH B 100 705 210 HOH HOH . J 5 HOH B 101 706 212 HOH HOH . J 5 HOH B 102 707 213 HOH HOH . J 5 HOH B 103 708 214 HOH HOH . J 5 HOH B 104 709 215 HOH HOH . J 5 HOH B 105 710 216 HOH HOH . J 5 HOH B 106 711 219 HOH HOH . J 5 HOH B 107 712 220 HOH HOH . J 5 HOH B 108 713 223 HOH HOH . J 5 HOH B 109 714 224 HOH HOH . J 5 HOH B 110 715 225 HOH HOH . J 5 HOH B 111 716 227 HOH HOH . J 5 HOH B 112 717 228 HOH HOH . J 5 HOH B 113 718 229 HOH HOH . J 5 HOH B 114 719 230 HOH HOH . J 5 HOH B 115 720 231 HOH HOH . J 5 HOH B 116 721 232 HOH HOH . J 5 HOH B 117 722 239 HOH HOH . J 5 HOH B 118 723 240 HOH HOH . J 5 HOH B 119 724 243 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 42.105 _atom_site.Cartn_y 10.482 _atom_site.Cartn_z 60.583 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.54 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 604 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #