data_2Q3L
#
_model_server_result.job_id            tvMR7M9cVonuvt5nFbXWlA 
_model_server_result.datetime_utc      '2024-12-26 21:23:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2q3l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":126}' 
#
_entry.id    2Q3L 
#
_exptl.entry_id    2Q3L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2Q3L 
_cell.length_a            40.387 
_cell.length_b            113.963 
_cell.length_c            130.692 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2Q3L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 1 1 
B,I,J,K,L,M,N,O,Q 2 1 
A,C,D,E,F,G,H,P 2 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_555 x+1/2,-y+1/2,-z 1 0 0 0 -1 0 0 0 -1 20.1935 56.9815 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLY 1 A GLY 0 1_555 A N MSE 2 A MSE 1 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.334 ? 
covale ? covale2 A C GLY 1 A GLY 0 1_555 A N MSE 2 A MSE 1 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.337 ? 
covale ? covale3 A C MSE 2 A MSE 1 1_555 A N SER 3 A SER 2 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale4 A C MSE 2 A MSE 1 1_555 A N SER 3 A SER 2 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale5 A C GLN 37 A GLN 36 1_555 A N MSE 38 A MSE 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.309 ? 
covale ? covale6 A C MSE 38 A MSE 37 1_555 A N THR 39 A THR 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale7 B C GLY 1 B GLY 0 1_555 B N MSE 2 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale8 B C MSE 2 B MSE 1 1_555 B N SER 3 B SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale9 B C GLN 37 B GLN 36 1_555 B N MSE 38 B MSE 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale10 B C MSE 38 B MSE 37 1_555 B N THR 39 B THR 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
metalc ? metalc1 A O ASN 105 A ASN 104 1_555 C NA NA . A NA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? 
metalc ? metalc2 A OD1 ASN 105 A ASN 104 1_555 C NA NA . A NA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? 
metalc ? metalc3 A O THR 108 A THR 107 1_555 C NA NA . A NA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
metalc ? metalc4 A OG1 THR 108 A THR 107 1_555 C NA NA . A NA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? 
metalc ? metalc5 A O GLY 110 A GLY 109 1_555 C NA NA . A NA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? 
metalc ? metalc6 C NA NA . A NA 126 1_555 P O HOH . A HOH 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? 
metalc ? metalc7 B O ASN 105 B ASN 104 1_555 I NA NA . B NA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? 
metalc ? metalc8 B OD1 ASN 105 B ASN 104 1_555 I NA NA . B NA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? 
metalc ? metalc9 B O THR 108 B THR 107 1_555 I NA NA . B NA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? 
metalc ? metalc10 B OG1 THR 108 B THR 107 1_555 I NA NA . B NA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? 
metalc ? metalc11 B O GLY 110 B GLY 109 1_555 I NA NA . B NA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? 
metalc ? metalc12 I NA NA . B NA 126 1_555 Q O HOH . B HOH 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2Q3L 
_atom_sites.fract_transf_matrix[1][1]    0.02476 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008775 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007652 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NA A 1 126 1 NA NA . 
D 3 CL A 1 127 4 CL CL . 
E 4 MPD A 1 128 7 MPD MPD . 
F 4 MPD A 1 129 8 MPD MPD . 
G 4 MPD A 1 130 12 MPD MPD . 
H 4 MPD A 1 131 13 MPD MPD . 
I 2 NA B 1 126 2 NA NA . 
J 3 CL B 1 127 3 CL CL . 
K 4 MPD B 1 128 5 MPD MPD . 
L 4 MPD B 1 129 6 MPD MPD . 
M 4 MPD B 1 130 9 MPD MPD . 
N 4 MPD B 1 131 10 MPD MPD . 
O 4 MPD B 1 132 11 MPD MPD . 
P 5 HOH A 1 132 14 HOH HOH . 
P 5 HOH A 2 133 15 HOH HOH . 
P 5 HOH A 3 134 16 HOH HOH . 
P 5 HOH A 4 135 19 HOH HOH . 
P 5 HOH A 5 136 21 HOH HOH . 
P 5 HOH A 6 137 22 HOH HOH . 
P 5 HOH A 7 138 23 HOH HOH . 
P 5 HOH A 8 139 24 HOH HOH . 
P 5 HOH A 9 140 26 HOH HOH . 
P 5 HOH A 10 141 27 HOH HOH . 
P 5 HOH A 11 142 28 HOH HOH . 
P 5 HOH A 12 143 29 HOH HOH . 
P 5 HOH A 13 144 30 HOH HOH . 
P 5 HOH A 14 145 31 HOH HOH . 
P 5 HOH A 15 146 32 HOH HOH . 
P 5 HOH A 16 147 33 HOH HOH . 
P 5 HOH A 17 148 34 HOH HOH . 
P 5 HOH A 18 149 39 HOH HOH . 
P 5 HOH A 19 150 41 HOH HOH . 
P 5 HOH A 20 151 44 HOH HOH . 
P 5 HOH A 21 152 49 HOH HOH . 
P 5 HOH A 22 153 51 HOH HOH . 
P 5 HOH A 23 154 52 HOH HOH . 
P 5 HOH A 24 155 54 HOH HOH . 
P 5 HOH A 25 156 56 HOH HOH . 
P 5 HOH A 26 157 58 HOH HOH . 
P 5 HOH A 27 158 59 HOH HOH . 
P 5 HOH A 28 159 61 HOH HOH . 
P 5 HOH A 29 160 62 HOH HOH . 
P 5 HOH A 30 161 65 HOH HOH . 
P 5 HOH A 31 162 66 HOH HOH . 
P 5 HOH A 32 163 67 HOH HOH . 
P 5 HOH A 33 164 68 HOH HOH . 
P 5 HOH A 34 165 69 HOH HOH . 
P 5 HOH A 35 166 70 HOH HOH . 
P 5 HOH A 36 167 73 HOH HOH . 
P 5 HOH A 37 168 74 HOH HOH . 
P 5 HOH A 38 169 75 HOH HOH . 
P 5 HOH A 39 170 76 HOH HOH . 
P 5 HOH A 40 171 78 HOH HOH . 
P 5 HOH A 41 172 79 HOH HOH . 
P 5 HOH A 42 173 80 HOH HOH . 
P 5 HOH A 43 174 81 HOH HOH . 
P 5 HOH A 44 175 84 HOH HOH . 
P 5 HOH A 45 176 85 HOH HOH . 
P 5 HOH A 46 177 87 HOH HOH . 
P 5 HOH A 47 178 89 HOH HOH . 
P 5 HOH A 48 179 91 HOH HOH . 
P 5 HOH A 49 180 92 HOH HOH . 
P 5 HOH A 50 181 94 HOH HOH . 
P 5 HOH A 51 182 95 HOH HOH . 
P 5 HOH A 52 183 96 HOH HOH . 
P 5 HOH A 53 184 98 HOH HOH . 
P 5 HOH A 54 185 102 HOH HOH . 
P 5 HOH A 55 186 105 HOH HOH . 
P 5 HOH A 56 187 107 HOH HOH . 
Q 5 HOH B 1 133 17 HOH HOH . 
Q 5 HOH B 2 134 18 HOH HOH . 
Q 5 HOH B 3 135 20 HOH HOH . 
Q 5 HOH B 4 136 25 HOH HOH . 
Q 5 HOH B 5 137 35 HOH HOH . 
Q 5 HOH B 6 138 36 HOH HOH . 
Q 5 HOH B 7 139 37 HOH HOH . 
Q 5 HOH B 8 140 38 HOH HOH . 
Q 5 HOH B 9 141 40 HOH HOH . 
Q 5 HOH B 10 142 42 HOH HOH . 
Q 5 HOH B 11 143 43 HOH HOH . 
Q 5 HOH B 12 144 45 HOH HOH . 
Q 5 HOH B 13 145 46 HOH HOH . 
Q 5 HOH B 14 146 47 HOH HOH . 
Q 5 HOH B 15 147 48 HOH HOH . 
Q 5 HOH B 16 148 50 HOH HOH . 
Q 5 HOH B 17 149 53 HOH HOH . 
Q 5 HOH B 18 150 55 HOH HOH . 
Q 5 HOH B 19 151 57 HOH HOH . 
Q 5 HOH B 20 152 60 HOH HOH . 
Q 5 HOH B 21 153 63 HOH HOH . 
Q 5 HOH B 22 154 64 HOH HOH . 
Q 5 HOH B 23 155 71 HOH HOH . 
Q 5 HOH B 24 156 72 HOH HOH . 
Q 5 HOH B 25 157 77 HOH HOH . 
Q 5 HOH B 26 158 82 HOH HOH . 
Q 5 HOH B 27 159 83 HOH HOH . 
Q 5 HOH B 28 160 86 HOH HOH . 
Q 5 HOH B 29 161 88 HOH HOH . 
Q 5 HOH B 30 162 90 HOH HOH . 
Q 5 HOH B 31 163 93 HOH HOH . 
Q 5 HOH B 32 164 97 HOH HOH . 
Q 5 HOH B 33 165 99 HOH HOH . 
Q 5 HOH B 34 166 100 HOH HOH . 
Q 5 HOH B 35 167 101 HOH HOH . 
Q 5 HOH B 36 168 103 HOH HOH . 
Q 5 HOH B 37 169 104 HOH HOH . 
Q 5 HOH B 38 170 106 HOH HOH . 
Q 5 HOH B 39 171 108 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               48.052 
_atom_site.Cartn_y               37.295 
_atom_site.Cartn_z               -13.938 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        37.38 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           126 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           257 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#