data_2Q3R # _model_server_result.job_id zDqzDzvLP3sasuUB7wZJNg _model_server_result.datetime_utc '2024-11-27 03:09:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2q3r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":373}' # _entry.id 2Q3R # _exptl.entry_id 2Q3R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2Q3R _cell.length_a 46.688 _cell.length_b 88.066 _cell.length_c 149.334 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Q3R _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 2Q3R _atom_sites.fract_transf_matrix[1][1] 0.021419 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011355 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006696 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 373 1 FMN FMN . C 3 HOH A 1 374 3 HOH HOH . C 3 HOH A 2 375 4 HOH HOH . C 3 HOH A 3 376 5 HOH HOH . C 3 HOH A 4 377 6 HOH HOH . C 3 HOH A 5 378 7 HOH HOH . C 3 HOH A 6 379 8 HOH HOH . C 3 HOH A 7 380 9 HOH HOH . C 3 HOH A 8 381 10 HOH HOH . C 3 HOH A 9 382 11 HOH HOH . C 3 HOH A 10 383 12 HOH HOH . C 3 HOH A 11 384 13 HOH HOH . C 3 HOH A 12 385 14 HOH HOH . C 3 HOH A 13 386 15 HOH HOH . C 3 HOH A 14 387 16 HOH HOH . C 3 HOH A 15 388 17 HOH HOH . C 3 HOH A 16 389 19 HOH HOH . C 3 HOH A 17 390 20 HOH HOH . C 3 HOH A 18 391 21 HOH HOH . C 3 HOH A 19 392 22 HOH HOH . C 3 HOH A 20 393 23 HOH HOH . C 3 HOH A 21 394 24 HOH HOH . C 3 HOH A 22 395 25 HOH HOH . C 3 HOH A 23 396 26 HOH HOH . C 3 HOH A 24 397 27 HOH HOH . C 3 HOH A 25 398 28 HOH HOH . C 3 HOH A 26 399 29 HOH HOH . C 3 HOH A 27 400 30 HOH HOH . C 3 HOH A 28 401 31 HOH HOH . C 3 HOH A 29 402 32 HOH HOH . C 3 HOH A 30 403 33 HOH HOH . C 3 HOH A 31 404 34 HOH HOH . C 3 HOH A 32 405 35 HOH HOH . C 3 HOH A 33 406 36 HOH HOH . C 3 HOH A 34 407 37 HOH HOH . C 3 HOH A 35 408 38 HOH HOH . C 3 HOH A 36 409 39 HOH HOH . C 3 HOH A 37 410 41 HOH HOH . C 3 HOH A 38 411 42 HOH HOH . C 3 HOH A 39 412 43 HOH HOH . C 3 HOH A 40 413 44 HOH HOH . C 3 HOH A 41 414 45 HOH HOH . C 3 HOH A 42 415 46 HOH HOH . C 3 HOH A 43 416 47 HOH HOH . C 3 HOH A 44 417 48 HOH HOH . C 3 HOH A 45 418 49 HOH HOH . C 3 HOH A 46 419 50 HOH HOH . C 3 HOH A 47 420 51 HOH HOH . C 3 HOH A 48 421 52 HOH HOH . C 3 HOH A 49 422 53 HOH HOH . C 3 HOH A 50 423 55 HOH HOH . C 3 HOH A 51 424 56 HOH HOH . C 3 HOH A 52 425 57 HOH HOH . C 3 HOH A 53 426 58 HOH HOH . C 3 HOH A 54 427 59 HOH HOH . C 3 HOH A 55 428 60 HOH HOH . C 3 HOH A 56 429 61 HOH HOH . C 3 HOH A 57 430 62 HOH HOH . C 3 HOH A 58 431 63 HOH HOH . C 3 HOH A 59 432 64 HOH HOH . C 3 HOH A 60 433 65 HOH HOH . C 3 HOH A 61 434 66 HOH HOH . C 3 HOH A 62 435 67 HOH HOH . C 3 HOH A 63 436 68 HOH HOH . C 3 HOH A 64 437 69 HOH HOH . C 3 HOH A 65 438 70 HOH HOH . C 3 HOH A 66 439 71 HOH HOH . C 3 HOH A 67 440 72 HOH HOH . C 3 HOH A 68 441 73 HOH HOH . C 3 HOH A 69 442 74 HOH HOH . C 3 HOH A 70 443 76 HOH HOH . C 3 HOH A 71 444 77 HOH HOH . C 3 HOH A 72 445 78 HOH HOH . C 3 HOH A 73 446 79 HOH HOH . C 3 HOH A 74 447 80 HOH HOH . C 3 HOH A 75 448 81 HOH HOH . C 3 HOH A 76 449 82 HOH HOH . C 3 HOH A 77 450 83 HOH HOH . C 3 HOH A 78 451 84 HOH HOH . C 3 HOH A 79 452 85 HOH HOH . C 3 HOH A 80 453 86 HOH HOH . C 3 HOH A 81 454 87 HOH HOH . C 3 HOH A 82 455 88 HOH HOH . C 3 HOH A 83 456 89 HOH HOH . C 3 HOH A 84 457 90 HOH HOH . C 3 HOH A 85 458 91 HOH HOH . C 3 HOH A 86 459 92 HOH HOH . C 3 HOH A 87 460 93 HOH HOH . C 3 HOH A 88 461 94 HOH HOH . C 3 HOH A 89 462 95 HOH HOH . C 3 HOH A 90 463 96 HOH HOH . C 3 HOH A 91 464 97 HOH HOH . C 3 HOH A 92 465 98 HOH HOH . C 3 HOH A 93 466 99 HOH HOH . C 3 HOH A 94 467 100 HOH HOH . C 3 HOH A 95 468 101 HOH HOH . C 3 HOH A 96 469 102 HOH HOH . C 3 HOH A 97 470 103 HOH HOH . C 3 HOH A 98 471 104 HOH HOH . C 3 HOH A 99 472 105 HOH HOH . C 3 HOH A 100 473 106 HOH HOH . C 3 HOH A 101 474 107 HOH HOH . C 3 HOH A 102 475 108 HOH HOH . C 3 HOH A 103 476 109 HOH HOH . C 3 HOH A 104 477 110 HOH HOH . C 3 HOH A 105 478 111 HOH HOH . C 3 HOH A 106 479 112 HOH HOH . C 3 HOH A 107 480 113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . B 2 14.322 42.818 60.074 0.06 16.6 ? N1 FMN 373 A 1 HETATM 2 C C2 FMN . . . B 2 13.983 41.631 59.544 0.06 18.66 ? C2 FMN 373 A 1 HETATM 3 O O2 FMN . . . B 2 14.827 40.768 59.476 0.06 18.84 ? O2 FMN 373 A 1 HETATM 4 N N3 FMN . . . B 2 12.74 41.344 59.074 0.06 16.73 ? N3 FMN 373 A 1 HETATM 5 C C4 FMN . . . B 2 11.723 42.255 59.113 0.06 16.01 ? C4 FMN 373 A 1 HETATM 6 O O4 FMN . . . B 2 10.625 41.995 58.679 0.06 15.79 ? O4 FMN 373 A 1 HETATM 7 C C4A FMN . . . B 2 12.014 43.578 59.69 0.06 17.26 ? C4A FMN 373 A 1 HETATM 8 N N5 FMN . . . B 2 11.095 44.545 59.764 0.06 18.84 ? N5 FMN 373 A 1 HETATM 9 C C5A FMN . . . B 2 11.381 45.786 60.269 0.06 17.23 ? C5A FMN 373 A 1 HETATM 10 C C6 FMN . . . B 2 10.384 46.814 60.309 0.06 15.65 ? C6 FMN 373 A 1 HETATM 11 C C7 FMN . . . B 2 10.684 48.072 60.803 0.06 16.94 ? C7 FMN 373 A 1 HETATM 12 C C7M FMN . . . B 2 9.621 49.147 60.822 0.06 14.14 ? C7M FMN 373 A 1 HETATM 13 C C8 FMN . . . B 2 11.987 48.365 61.29 0.06 18.13 ? C8 FMN 373 A 1 HETATM 14 C C8M FMN . . . B 2 12.318 49.744 61.836 0.06 16.41 ? C8M FMN 373 A 1 HETATM 15 C C9 FMN . . . B 2 12.974 47.39 61.261 0.06 16.38 ? C9 FMN 373 A 1 HETATM 16 C C9A FMN . . . B 2 12.697 46.073 60.745 0.06 16.31 ? C9A FMN 373 A 1 HETATM 17 N N10 FMN . . . B 2 13.711 45.065 60.683 0.06 15.33 ? N10 FMN 373 A 1 HETATM 18 C C10 FMN . . . B 2 13.417 43.811 60.172 0.06 18.06 ? C10 FMN 373 A 1 HETATM 19 C C1' FMN . . . B 2 14.979 45.48 61.15 0.06 10.04 ? C1' FMN 373 A 1 HETATM 20 C C2' FMN . . . B 2 15.74 46.093 59.929 0.06 12.94 ? C2' FMN 373 A 1 HETATM 21 O O2' FMN . . . B 2 16.003 44.977 58.982 0.06 0.17 ? O2' FMN 373 A 1 HETATM 22 C C3' FMN . . . B 2 16.913 46.824 60.728 0.06 15.66 ? C3' FMN 373 A 1 HETATM 23 O O3' FMN . . . B 2 16.225 47.884 61.503 0.06 8.7 ? O3' FMN 373 A 1 HETATM 24 C C4' FMN . . . B 2 17.9 47.683 60.009 0.06 20.6 ? C4' FMN 373 A 1 HETATM 25 O O4' FMN . . . B 2 18.794 46.89 59.159 0.06 25.65 ? O4' FMN 373 A 1 HETATM 26 C C5' FMN . . . B 2 18.621 48.376 61.169 0.06 17.14 ? C5' FMN 373 A 1 HETATM 27 O O5' FMN . . . B 2 19.317 49.447 60.648 0.06 13.29 ? O5' FMN 373 A 1 HETATM 28 P P FMN . . . B 2 19.803 50.254 61.933 0.06 12.09 ? P FMN 373 A 1 HETATM 29 O O1P FMN . . . B 2 20.221 49.605 63.208 0.06 21.38 ? O1P FMN 373 A 1 HETATM 30 O O2P FMN . . . B 2 20.498 51.655 61.708 0.06 14.78 ? O2P FMN 373 A 1 HETATM 31 O O3P FMN . . . B 2 21.217 49.742 61.399 0.06 23.88 ? O3P FMN 373 A 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 58 _model_server_stats.query_time_ms 4324 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #