data_2Q3T # _model_server_result.job_id RWUsx6Ksxp7bH5Q81chtGQ _model_server_result.datetime_utc '2024-11-27 02:18:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2q3t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 2Q3T # _exptl.entry_id 2Q3T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2Q3T _cell.length_a 83.45 _cell.length_b 83.45 _cell.length_c 60.575 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Q3T _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PQS monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J 1 1,2 A,B,C,D,E,F,G,H,I,J 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 173 n n C1 C2 EDO sing 174 n n C1 H11 EDO sing 175 n n C1 H12 EDO sing 176 n n O1 HO1 EDO sing 177 n n C2 O2 EDO sing 178 n n C2 H21 EDO sing 179 n n C2 H22 EDO sing 180 n n O2 HO2 EDO sing 181 n n # _atom_sites.entry_id 2Q3T _atom_sites.fract_transf_matrix[1][1] 0.011983 _atom_sites.fract_transf_matrix[1][2] 0.006919 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013837 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016508 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 300 300 SO4 SO4 . C 2 SO4 A 1 301 301 SO4 SO4 . D 2 SO4 A 1 302 302 SO4 SO4 . E 3 CPS A 1 200 200 CPS CPS . F 4 EDO A 1 401 401 EDO EDO . G 4 EDO A 1 402 402 EDO EDO . H 4 EDO A 1 403 403 EDO EDO . I 4 EDO A 1 404 404 EDO EDO . J 5 HOH A 1 405 1 HOH HOH . J 5 HOH A 2 406 2 HOH HOH . J 5 HOH A 3 407 3 HOH HOH . J 5 HOH A 4 408 4 HOH HOH . J 5 HOH A 5 409 5 HOH HOH . J 5 HOH A 6 410 6 HOH HOH . J 5 HOH A 7 411 7 HOH HOH . J 5 HOH A 8 412 8 HOH HOH . J 5 HOH A 9 413 9 HOH HOH . J 5 HOH A 10 414 10 HOH HOH . J 5 HOH A 11 415 11 HOH HOH . J 5 HOH A 12 416 12 HOH HOH . J 5 HOH A 13 417 13 HOH HOH . J 5 HOH A 14 418 14 HOH HOH . J 5 HOH A 15 419 15 HOH HOH . J 5 HOH A 16 420 16 HOH HOH . J 5 HOH A 17 421 17 HOH HOH . J 5 HOH A 18 422 18 HOH HOH . J 5 HOH A 19 423 19 HOH HOH . J 5 HOH A 20 424 20 HOH HOH . J 5 HOH A 21 425 21 HOH HOH . J 5 HOH A 22 426 22 HOH HOH . J 5 HOH A 23 427 23 HOH HOH . J 5 HOH A 24 428 24 HOH HOH . J 5 HOH A 25 429 25 HOH HOH . J 5 HOH A 26 430 26 HOH HOH . J 5 HOH A 27 431 27 HOH HOH . J 5 HOH A 28 432 28 HOH HOH . J 5 HOH A 29 433 29 HOH HOH . J 5 HOH A 30 434 30 HOH HOH . J 5 HOH A 31 435 31 HOH HOH . J 5 HOH A 32 436 32 HOH HOH . J 5 HOH A 33 437 33 HOH HOH . J 5 HOH A 34 438 34 HOH HOH . J 5 HOH A 35 439 35 HOH HOH . J 5 HOH A 36 440 36 HOH HOH . J 5 HOH A 37 441 37 HOH HOH . J 5 HOH A 38 442 38 HOH HOH . J 5 HOH A 39 443 39 HOH HOH . J 5 HOH A 40 444 40 HOH HOH . J 5 HOH A 41 445 41 HOH HOH . J 5 HOH A 42 446 42 HOH HOH . J 5 HOH A 43 447 43 HOH HOH . J 5 HOH A 44 448 44 HOH HOH . J 5 HOH A 45 449 45 HOH HOH . J 5 HOH A 46 450 46 HOH HOH . J 5 HOH A 47 451 47 HOH HOH . J 5 HOH A 48 452 48 HOH HOH . J 5 HOH A 49 453 49 HOH HOH . J 5 HOH A 50 454 50 HOH HOH . J 5 HOH A 51 455 51 HOH HOH . J 5 HOH A 52 456 52 HOH HOH . J 5 HOH A 53 457 53 HOH HOH . J 5 HOH A 54 458 54 HOH HOH . J 5 HOH A 55 459 55 HOH HOH . J 5 HOH A 56 460 56 HOH HOH . J 5 HOH A 57 461 57 HOH HOH . J 5 HOH A 58 462 58 HOH HOH . J 5 HOH A 59 463 59 HOH HOH . J 5 HOH A 60 464 60 HOH HOH . J 5 HOH A 61 465 61 HOH HOH . J 5 HOH A 62 466 62 HOH HOH . J 5 HOH A 63 467 63 HOH HOH . J 5 HOH A 64 468 64 HOH HOH . J 5 HOH A 65 469 65 HOH HOH . J 5 HOH A 66 470 66 HOH HOH . J 5 HOH A 67 471 67 HOH HOH . J 5 HOH A 68 472 68 HOH HOH . J 5 HOH A 69 473 69 HOH HOH . J 5 HOH A 70 474 70 HOH HOH . J 5 HOH A 71 475 71 HOH HOH . J 5 HOH A 72 476 72 HOH HOH . J 5 HOH A 73 477 73 HOH HOH . J 5 HOH A 74 478 74 HOH HOH . J 5 HOH A 75 479 75 HOH HOH . J 5 HOH A 76 480 76 HOH HOH . J 5 HOH A 77 481 77 HOH HOH . J 5 HOH A 78 482 78 HOH HOH . J 5 HOH A 79 483 79 HOH HOH . J 5 HOH A 80 484 80 HOH HOH . J 5 HOH A 81 485 81 HOH HOH . J 5 HOH A 82 486 82 HOH HOH . J 5 HOH A 83 487 83 HOH HOH . J 5 HOH A 84 488 84 HOH HOH . J 5 HOH A 85 489 85 HOH HOH . J 5 HOH A 86 490 86 HOH HOH . J 5 HOH A 87 491 87 HOH HOH . J 5 HOH A 88 492 88 HOH HOH . J 5 HOH A 89 493 89 HOH HOH . J 5 HOH A 90 494 90 HOH HOH . J 5 HOH A 91 495 91 HOH HOH . J 5 HOH A 92 496 92 HOH HOH . J 5 HOH A 93 497 93 HOH HOH . J 5 HOH A 94 498 94 HOH HOH . J 5 HOH A 95 499 95 HOH HOH . J 5 HOH A 96 500 96 HOH HOH . J 5 HOH A 97 501 97 HOH HOH . J 5 HOH A 98 502 98 HOH HOH . J 5 HOH A 99 503 99 HOH HOH . J 5 HOH A 100 504 100 HOH HOH . J 5 HOH A 101 505 101 HOH HOH . J 5 HOH A 102 506 102 HOH HOH . J 5 HOH A 103 507 103 HOH HOH . J 5 HOH A 104 508 104 HOH HOH . J 5 HOH A 105 509 105 HOH HOH . J 5 HOH A 106 510 106 HOH HOH . J 5 HOH A 107 511 107 HOH HOH . J 5 HOH A 108 512 108 HOH HOH . J 5 HOH A 109 513 109 HOH HOH . J 5 HOH A 110 514 110 HOH HOH . J 5 HOH A 111 515 111 HOH HOH . J 5 HOH A 112 516 112 HOH HOH . J 5 HOH A 113 517 113 HOH HOH . J 5 HOH A 114 518 114 HOH HOH . J 5 HOH A 115 519 115 HOH HOH . J 5 HOH A 116 520 116 HOH HOH . J 5 HOH A 117 521 117 HOH HOH . J 5 HOH A 118 522 118 HOH HOH . J 5 HOH A 119 523 119 HOH HOH . J 5 HOH A 120 524 120 HOH HOH . J 5 HOH A 121 525 121 HOH HOH . J 5 HOH A 122 526 122 HOH HOH . J 5 HOH A 123 527 123 HOH HOH . J 5 HOH A 124 528 124 HOH HOH . J 5 HOH A 125 529 125 HOH HOH . J 5 HOH A 126 530 126 HOH HOH . J 5 HOH A 127 531 127 HOH HOH . J 5 HOH A 128 532 128 HOH HOH . J 5 HOH A 129 533 129 HOH HOH . J 5 HOH A 130 534 130 HOH HOH . J 5 HOH A 131 535 131 HOH HOH . J 5 HOH A 132 536 132 HOH HOH . J 5 HOH A 133 537 133 HOH HOH . J 5 HOH A 134 538 134 HOH HOH . J 5 HOH A 135 539 135 HOH HOH . J 5 HOH A 136 540 136 HOH HOH . J 5 HOH A 137 541 137 HOH HOH . J 5 HOH A 138 542 138 HOH HOH . J 5 HOH A 139 543 139 HOH HOH . J 5 HOH A 140 544 140 HOH HOH . J 5 HOH A 141 545 141 HOH HOH . J 5 HOH A 142 546 142 HOH HOH . J 5 HOH A 143 547 143 HOH HOH . J 5 HOH A 144 548 144 HOH HOH . J 5 HOH A 145 549 145 HOH HOH . J 5 HOH A 146 550 146 HOH HOH . J 5 HOH A 147 551 147 HOH HOH . J 5 HOH A 148 552 148 HOH HOH . J 5 HOH A 149 553 149 HOH HOH . J 5 HOH A 150 554 150 HOH HOH . J 5 HOH A 151 555 151 HOH HOH . J 5 HOH A 152 556 152 HOH HOH . J 5 HOH A 153 557 153 HOH HOH . J 5 HOH A 154 558 154 HOH HOH . J 5 HOH A 155 559 155 HOH HOH . J 5 HOH A 156 560 156 HOH HOH . J 5 HOH A 157 561 157 HOH HOH . J 5 HOH A 158 562 158 HOH HOH . J 5 HOH A 159 563 159 HOH HOH . J 5 HOH A 160 564 160 HOH HOH . J 5 HOH A 161 565 161 HOH HOH . J 5 HOH A 162 566 162 HOH HOH . J 5 HOH A 163 567 163 HOH HOH . J 5 HOH A 164 568 164 HOH HOH . J 5 HOH A 165 569 165 HOH HOH . J 5 HOH A 166 570 166 HOH HOH . J 5 HOH A 167 571 167 HOH HOH . J 5 HOH A 168 572 168 HOH HOH . J 5 HOH A 169 573 169 HOH HOH . J 5 HOH A 170 574 170 HOH HOH . J 5 HOH A 171 575 171 HOH HOH . J 5 HOH A 172 576 172 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 4 33.909 29.429 -11.956 0.06 17.67 ? C1 EDO 401 A 1 HETATM 2 O O1 EDO . . . F 4 34.083 29.719 -10.475 0.06 16.35 ? O1 EDO 401 A 1 HETATM 3 C C2 EDO . . . F 4 34.958 28.197 -12.313 0.06 20.96 ? C2 EDO 401 A 1 HETATM 4 O O2 EDO . . . F 4 34.475 26.867 -11.819 0.06 18.74 ? O2 EDO 401 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 4484 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #