data_2Q3Y # _model_server_result.job_id LC58ETuwz1GE-NnEdYPHDg _model_server_result.datetime_utc '2024-11-24 20:20:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2q3y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":248}' # _entry.id 2Q3Y # _exptl.entry_id 2Q3Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2Q3Y _cell.length_a 78.995 _cell.length_b 78.995 _cell.length_c 112.467 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Q3Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 186 n n C1 C2 GOL sing 187 n n C1 H11 GOL sing 188 n n C1 H12 GOL sing 189 n n O1 HO1 GOL sing 190 n n C2 O2 GOL sing 191 n n C2 C3 GOL sing 192 n n C2 H2 GOL sing 193 n n O2 HO2 GOL sing 194 n n C3 O3 GOL sing 195 n n C3 H31 GOL sing 196 n n C3 H32 GOL sing 197 n n O3 HO3 GOL sing 198 n n # _atom_sites.entry_id 2Q3Y _atom_sites.fract_transf_matrix[1][1] 0.012659 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012659 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008891 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 1CA A 1 247 201 1CA 1CA . D 4 GOL A 1 248 202 GOL GOL . E 5 HOH A 1 249 1 HOH HOH . E 5 HOH A 2 250 2 HOH HOH . E 5 HOH A 3 251 3 HOH HOH . E 5 HOH A 4 252 4 HOH HOH . E 5 HOH A 5 253 5 HOH HOH . E 5 HOH A 6 254 6 HOH HOH . E 5 HOH A 7 255 7 HOH HOH . E 5 HOH A 8 256 8 HOH HOH . E 5 HOH A 9 257 9 HOH HOH . E 5 HOH A 10 258 10 HOH HOH . E 5 HOH A 11 259 11 HOH HOH . E 5 HOH A 12 260 12 HOH HOH . E 5 HOH A 13 261 13 HOH HOH . E 5 HOH A 14 262 14 HOH HOH . E 5 HOH A 15 263 15 HOH HOH . E 5 HOH A 16 264 16 HOH HOH . E 5 HOH A 17 265 17 HOH HOH . E 5 HOH A 18 266 18 HOH HOH . E 5 HOH A 19 267 20 HOH HOH . E 5 HOH A 20 268 21 HOH HOH . E 5 HOH A 21 269 22 HOH HOH . E 5 HOH A 22 270 23 HOH HOH . E 5 HOH A 23 271 25 HOH HOH . E 5 HOH A 24 272 26 HOH HOH . E 5 HOH A 25 273 27 HOH HOH . E 5 HOH A 26 274 28 HOH HOH . E 5 HOH A 27 275 29 HOH HOH . E 5 HOH A 28 276 30 HOH HOH . E 5 HOH A 29 277 31 HOH HOH . E 5 HOH A 30 278 32 HOH HOH . E 5 HOH A 31 279 33 HOH HOH . E 5 HOH A 32 280 34 HOH HOH . E 5 HOH A 33 281 35 HOH HOH . E 5 HOH A 34 282 36 HOH HOH . E 5 HOH A 35 283 37 HOH HOH . E 5 HOH A 36 284 38 HOH HOH . E 5 HOH A 37 285 40 HOH HOH . E 5 HOH A 38 286 41 HOH HOH . E 5 HOH A 39 287 42 HOH HOH . E 5 HOH A 40 288 44 HOH HOH . E 5 HOH A 41 289 45 HOH HOH . E 5 HOH A 42 290 46 HOH HOH . E 5 HOH A 43 291 47 HOH HOH . E 5 HOH A 44 292 48 HOH HOH . E 5 HOH A 45 293 49 HOH HOH . E 5 HOH A 46 294 50 HOH HOH . E 5 HOH A 47 295 51 HOH HOH . E 5 HOH A 48 296 52 HOH HOH . E 5 HOH A 49 297 53 HOH HOH . E 5 HOH A 50 298 54 HOH HOH . E 5 HOH A 51 299 56 HOH HOH . E 5 HOH A 52 300 57 HOH HOH . E 5 HOH A 53 301 58 HOH HOH . E 5 HOH A 54 302 59 HOH HOH . E 5 HOH A 55 303 60 HOH HOH . E 5 HOH A 56 304 61 HOH HOH . E 5 HOH A 57 305 62 HOH HOH . E 5 HOH A 58 306 63 HOH HOH . E 5 HOH A 59 307 65 HOH HOH . E 5 HOH A 60 308 66 HOH HOH . E 5 HOH A 61 309 68 HOH HOH . E 5 HOH A 62 310 69 HOH HOH . E 5 HOH A 63 311 71 HOH HOH . E 5 HOH A 64 312 72 HOH HOH . E 5 HOH A 65 313 73 HOH HOH . E 5 HOH A 66 314 74 HOH HOH . E 5 HOH A 67 315 75 HOH HOH . E 5 HOH A 68 316 76 HOH HOH . E 5 HOH A 69 317 77 HOH HOH . E 5 HOH A 70 318 78 HOH HOH . E 5 HOH A 71 319 79 HOH HOH . E 5 HOH A 72 320 80 HOH HOH . E 5 HOH A 73 321 81 HOH HOH . E 5 HOH A 74 322 84 HOH HOH . E 5 HOH A 75 323 86 HOH HOH . E 5 HOH A 76 324 89 HOH HOH . E 5 HOH A 77 325 90 HOH HOH . E 5 HOH A 78 326 91 HOH HOH . E 5 HOH A 79 327 92 HOH HOH . E 5 HOH A 80 328 94 HOH HOH . E 5 HOH A 81 329 95 HOH HOH . E 5 HOH A 82 330 97 HOH HOH . E 5 HOH A 83 331 99 HOH HOH . E 5 HOH A 84 332 100 HOH HOH . E 5 HOH A 85 333 101 HOH HOH . E 5 HOH A 86 334 103 HOH HOH . E 5 HOH A 87 335 104 HOH HOH . E 5 HOH A 88 336 105 HOH HOH . E 5 HOH A 89 337 106 HOH HOH . E 5 HOH A 90 338 107 HOH HOH . E 5 HOH A 91 339 108 HOH HOH . E 5 HOH A 92 340 111 HOH HOH . E 5 HOH A 93 341 112 HOH HOH . E 5 HOH A 94 342 114 HOH HOH . E 5 HOH A 95 343 115 HOH HOH . E 5 HOH A 96 344 116 HOH HOH . E 5 HOH A 97 345 117 HOH HOH . E 5 HOH A 98 346 118 HOH HOH . E 5 HOH A 99 347 119 HOH HOH . E 5 HOH A 100 348 120 HOH HOH . E 5 HOH A 101 349 121 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 4 -16.934 -41.227 -7.988 1 45.71 ? C1 GOL 248 A 1 HETATM 2 O O1 GOL . . . D 4 -15.869 -41.861 -7.275 1 48.48 ? O1 GOL 248 A 1 HETATM 3 C C2 GOL . . . D 4 -16.549 -41.073 -9.461 1 46.13 ? C2 GOL 248 A 1 HETATM 4 O O2 GOL . . . D 4 -16.389 -42.358 -10.069 1 40.01 ? O2 GOL 248 A 1 HETATM 5 C C3 GOL . . . D 4 -15.246 -40.279 -9.574 1 45.74 ? C3 GOL 248 A 1 HETATM 6 O O3 GOL . . . D 4 -14.888 -40.145 -10.952 1 47.58 ? O3 GOL 248 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 213 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #