data_2Q4Y # _model_server_result.job_id eTAzcgEkXc_5cfZN6lj09A _model_server_result.datetime_utc '2024-11-23 11:26:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2q4y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":104}' # _entry.id 2Q4Y # _exptl.entry_id 2Q4Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.86 _cell.angle_gamma 90 _cell.entry_id 2Q4Y _cell.length_a 27.905 _cell.length_b 63.941 _cell.length_c 29.525 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Q4Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 2Q4Y _atom_sites.fract_transf_matrix[1][1] 0.035836 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000538 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015639 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.033873 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 COA A 1 104 101 COA COA . C 3 HOH A 1 105 1 HOH HOH . C 3 HOH A 2 106 2 HOH HOH . C 3 HOH A 3 107 3 HOH HOH . C 3 HOH A 4 108 4 HOH HOH . C 3 HOH A 5 109 5 HOH HOH . C 3 HOH A 6 110 6 HOH HOH . C 3 HOH A 7 111 7 HOH HOH . C 3 HOH A 8 112 8 HOH HOH . C 3 HOH A 9 113 9 HOH HOH . C 3 HOH A 10 114 10 HOH HOH . C 3 HOH A 11 115 11 HOH HOH . C 3 HOH A 12 116 12 HOH HOH . C 3 HOH A 13 117 13 HOH HOH . C 3 HOH A 14 118 14 HOH HOH . C 3 HOH A 15 119 15 HOH HOH . C 3 HOH A 16 120 16 HOH HOH . C 3 HOH A 17 121 17 HOH HOH . C 3 HOH A 18 122 18 HOH HOH . C 3 HOH A 19 123 19 HOH HOH . C 3 HOH A 20 124 20 HOH HOH . C 3 HOH A 21 125 22 HOH HOH . C 3 HOH A 22 126 23 HOH HOH . C 3 HOH A 23 127 24 HOH HOH . C 3 HOH A 24 128 25 HOH HOH . C 3 HOH A 25 129 26 HOH HOH . C 3 HOH A 26 130 27 HOH HOH . C 3 HOH A 27 131 28 HOH HOH . C 3 HOH A 28 132 29 HOH HOH . C 3 HOH A 29 133 30 HOH HOH . C 3 HOH A 30 134 31 HOH HOH . C 3 HOH A 31 135 32 HOH HOH . C 3 HOH A 32 136 33 HOH HOH . C 3 HOH A 33 137 34 HOH HOH . C 3 HOH A 34 138 35 HOH HOH . C 3 HOH A 35 139 36 HOH HOH . C 3 HOH A 36 140 37 HOH HOH . C 3 HOH A 37 141 38 HOH HOH . C 3 HOH A 38 142 39 HOH HOH . C 3 HOH A 39 143 40 HOH HOH . C 3 HOH A 40 144 41 HOH HOH . C 3 HOH A 41 145 42 HOH HOH . C 3 HOH A 42 146 43 HOH HOH . C 3 HOH A 43 147 44 HOH HOH . C 3 HOH A 44 148 45 HOH HOH . C 3 HOH A 45 149 46 HOH HOH . C 3 HOH A 46 150 47 HOH HOH . C 3 HOH A 47 151 48 HOH HOH . C 3 HOH A 48 152 49 HOH HOH . C 3 HOH A 49 153 50 HOH HOH . C 3 HOH A 50 154 51 HOH HOH . C 3 HOH A 51 155 52 HOH HOH . C 3 HOH A 52 156 53 HOH HOH . C 3 HOH A 53 157 54 HOH HOH . C 3 HOH A 54 158 55 HOH HOH . C 3 HOH A 55 159 56 HOH HOH . C 3 HOH A 56 160 57 HOH HOH . C 3 HOH A 57 161 58 HOH HOH . C 3 HOH A 58 162 59 HOH HOH . C 3 HOH A 59 163 60 HOH HOH . C 3 HOH A 60 164 61 HOH HOH . C 3 HOH A 61 165 62 HOH HOH . C 3 HOH A 62 166 63 HOH HOH . C 3 HOH A 63 167 64 HOH HOH . C 3 HOH A 64 168 65 HOH HOH . C 3 HOH A 65 169 66 HOH HOH . C 3 HOH A 66 170 67 HOH HOH . C 3 HOH A 67 171 68 HOH HOH . C 3 HOH A 68 172 69 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . B 2 -6.877 0.898 -6.232 0.25 32.44 ? N1A COA 104 A 1 HETATM 2 C C2A COA . . . B 2 -5.761 1.495 -6.727 0.25 35.88 ? C2A COA 104 A 1 HETATM 3 N N3A COA . . . B 2 -5.643 2.807 -6.773 0.25 33.14 ? N3A COA 104 A 1 HETATM 4 C C4A COA . . . B 2 -6.668 3.623 -6.418 0.25 33.09 ? C4A COA 104 A 1 HETATM 5 C C5A COA . . . B 2 -7.849 2.997 -5.857 0.25 34.74 ? C5A COA 104 A 1 HETATM 6 C C6A COA . . . B 2 -7.927 1.624 -5.861 0.25 32.06 ? C6A COA 104 A 1 HETATM 7 N N6A COA . . . B 2 -9.038 0.984 -5.418 0.25 30.5 ? N6A COA 104 A 1 HETATM 8 N N7A COA . . . B 2 -8.727 4.059 -5.561 0.25 35.62 ? N7A COA 104 A 1 HETATM 9 C C8A COA . . . B 2 -8.085 5.239 -5.817 0.25 36.86 ? C8A COA 104 A 1 HETATM 10 N N9A COA . . . B 2 -6.819 5.025 -6.31 0.25 33.98 ? N9A COA 104 A 1 HETATM 11 C C1B COA . . . B 2 -5.802 6.039 -6.77 0.25 36.05 ? C1B COA 104 A 1 HETATM 12 C C2B COA . . . B 2 -6.405 7.017 -7.967 0.25 41.43 ? C2B COA 104 A 1 HETATM 13 O O2B COA . . . B 2 -5.91 6.511 -9.265 0.25 33.61 ? O2B COA 104 A 1 HETATM 14 C C3B COA . . . B 2 -5.885 8.48 -7.64 0.25 40.27 ? C3B COA 104 A 1 HETATM 15 O O3B COA . . . B 2 -5.116 8.986 -8.667 0.25 47.09 ? O3B COA 104 A 1 HETATM 16 P P3B COA . . . B 2 -5.956 10.039 -9.373 0.25 48.44 ? P3B COA 104 A 1 HETATM 17 O O7A COA . . . B 2 -7.059 10.782 -8.776 0.25 49.83 ? O7A COA 104 A 1 HETATM 18 O O8A COA . . . B 2 -5.147 10.629 -10.617 0.25 50.38 ? O8A COA 104 A 1 HETATM 19 O O9A COA . . . B 2 -5.026 11.099 -8.542 0.25 51.42 ? O9A COA 104 A 1 HETATM 20 C C4B COA . . . B 2 -5.13 8.252 -6.298 0.25 38.64 ? C4B COA 104 A 1 HETATM 21 O O4B COA . . . B 2 -5.385 6.866 -5.779 0.25 34.76 ? O4B COA 104 A 1 HETATM 22 C C5B COA . . . B 2 -5.328 9.414 -5.306 0.25 34.9 ? C5B COA 104 A 1 HETATM 23 O O5B COA . . . B 2 -4.793 8.748 -4.234 0.25 31.24 ? O5B COA 104 A 1 HETATM 24 P P1A COA . . . B 2 -5.257 9.625 -2.729 0.25 34.81 ? P1A COA 104 A 1 HETATM 25 O O1A COA . . . B 2 -6.683 10.064 -2.829 0.25 29.57 ? O1A COA 104 A 1 HETATM 26 O O2A COA . . . B 2 -4.242 10.784 -2.401 0.25 36.52 ? O2A COA 104 A 1 HETATM 27 O O3A COA . . . B 2 -5.147 8.204 -2.036 0.25 27.93 ? O3A COA 104 A 1 HETATM 28 P P2A COA . . . B 2 -6.021 8.297 -0.705 0.25 22.38 ? P2A COA 104 A 1 HETATM 29 O O4A COA . . . B 2 -5.333 8.943 0.487 0.25 21.42 ? O4A COA 104 A 1 HETATM 30 O O5A COA . . . B 2 -7.315 8.928 -1.111 0.25 20.07 ? O5A COA 104 A 1 HETATM 31 O O6A COA . . . B 2 -6.088 6.722 -0.587 0.25 19.55 ? O6A COA 104 A 1 HETATM 32 C CBP COA . . . B 2 -6.534 4.421 -0.155 0.25 27.28 ? CBP COA 104 A 1 HETATM 33 C CCP COA . . . B 2 -6.699 5.929 0.357 0.25 25.86 ? CCP COA 104 A 1 HETATM 34 C CDP COA . . . B 2 -7.172 4.383 -1.495 0.25 26.45 ? CDP COA 104 A 1 HETATM 35 C CEP COA . . . B 2 -5.043 4.048 -0.178 0.25 27.46 ? CEP COA 104 A 1 HETATM 36 C CAP COA . . . B 2 -7.081 3.301 0.6 0.25 32.78 ? CAP COA 104 A 1 HETATM 37 O OAP COA . . . B 2 -6.365 3.36 1.817 0.25 37.94 ? OAP COA 104 A 1 HETATM 38 C C9P COA . . . B 2 -8.727 3.299 0.817 0.25 34.89 ? C9P COA 104 A 1 HETATM 39 O O9P COA . . . B 2 -9.248 2.653 1.597 0.25 36.58 ? O9P COA 104 A 1 HETATM 40 N N8P COA . . . B 2 -9.511 3.929 0.023 0.25 33.45 ? N8P COA 104 A 1 HETATM 41 C C7P COA . . . B 2 -10.883 3.851 0.026 0.25 37.58 ? C7P COA 104 A 1 HETATM 42 C C6P COA . . . B 2 -11.23 4.787 -1.112 0.25 36.96 ? C6P COA 104 A 1 HETATM 43 C C5P COA . . . B 2 -12.684 4.846 -1.411 0.25 40.17 ? C5P COA 104 A 1 HETATM 44 O O5P COA . . . B 2 -13.489 4.173 -0.764 0.25 37.53 ? O5P COA 104 A 1 HETATM 45 N N4P COA . . . B 2 -13.058 5.654 -2.447 0.25 44.07 ? N4P COA 104 A 1 HETATM 46 C C3P COA . . . B 2 -14.412 5.695 -2.8 0.25 46.56 ? C3P COA 104 A 1 HETATM 47 C C2P COA . . . B 2 -14.531 6.638 -3.898 0.25 51.11 ? C2P COA 104 A 1 HETATM 48 S S1P COA . . . B 2 -16.322 6.602 -4.25 0.25 57.41 ? S1P COA 104 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 1120 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 48 #