data_2Q58
#
_model_server_result.job_id            Oc30LYEWA22HlaUbxKqpyQ 
_model_server_result.datetime_utc      '2024-11-22 09:10:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2q58 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":4}' 
#
_entry.id    2Q58 
#
_exptl.entry_id    2Q58 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2Q58 
_cell.length_a            101.776 
_cell.length_b            101.776 
_cell.length_c            75.275 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2Q58 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        144 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 F O12 ZOL . A ZOL 1 1_555 C MG MG . A MG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? 
metalc ? metalc2 F O17 ZOL . A ZOL 1 1_555 C MG MG . A MG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? 
metalc ? metalc3 F O12 ZOL . A ZOL 1 1_555 D MG MG . A MG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc4 F O16 ZOL . A ZOL 1 1_555 E MG MG . A MG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? 
metalc ? metalc5 F O11 ZOL . A ZOL 1 1_555 E MG MG . A MG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? 
metalc ? metalc6 C MG MG . A MG 3 1_555 D MG MG . A MG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.073 ? 
metalc ? metalc7 C MG MG . A MG 3 1_555 A OD2 ASP 115 A ASP 1115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
metalc ? metalc8 C MG MG . A MG 3 1_555 A OD2 ASP 119 A ASP 1119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? 
metalc ? metalc9 C MG MG . A MG 3 1_555 K O HOH . A HOH 8002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? 
metalc ? metalc10 D MG MG . A MG 4 1_555 A OD1 ASP 115 A ASP 1115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc11 D MG MG . A MG 4 1_555 A OD2 ASP 119 A ASP 1119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? 
metalc ? metalc12 D MG MG . A MG 4 1_555 A OD1 ASP 119 A ASP 1119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.13 ? 
metalc ? metalc13 D MG MG . A MG 4 1_555 K O HOH . A HOH 8001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? 
metalc ? metalc14 E MG MG . A MG 5 1_555 A OD1 ASN 254 A ASN 1254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? 
metalc ? metalc15 E MG MG . A MG 5 1_555 K O HOH . A HOH 8006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? 
metalc ? metalc16 E MG MG . A MG 5 1_555 K O HOH . A HOH 8007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? 
metalc ? metalc17 E MG MG . A MG 5 1_555 K O HOH . A HOH 8008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? 
metalc ? metalc18 J O17 ZOL . B ZOL 2 1_555 G MG MG . B MG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? 
metalc ? metalc19 J O12 ZOL . B ZOL 2 1_555 G MG MG . B MG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.802 ? 
metalc ? metalc20 J O12 ZOL . B ZOL 2 1_555 H MG MG . B MG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? 
metalc ? metalc21 J O11 ZOL . B ZOL 2 1_555 I MG MG . B MG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
metalc ? metalc22 J O16 ZOL . B ZOL 2 1_555 I MG MG . B MG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? 
metalc ? metalc23 G MG MG . B MG 6 1_555 B OD2 ASP 115 B ASP 2115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? 
metalc ? metalc24 G MG MG . B MG 6 1_555 B OD2 ASP 119 B ASP 2119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? 
metalc ? metalc25 G MG MG . B MG 6 1_555 L O HOH . B HOH 8003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc26 G MG MG . B MG 6 1_555 L O HOH . B HOH 8004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? 
metalc ? metalc27 H MG MG . B MG 7 1_555 B OD1 ASP 115 B ASP 2115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.143 ? 
metalc ? metalc28 H MG MG . B MG 7 1_555 B OD2 ASP 119 B ASP 2119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? 
metalc ? metalc29 H MG MG . B MG 7 1_555 B OD2 ASP 187 B ASP 2187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.943 ? 
metalc ? metalc30 H MG MG . B MG 7 1_555 L O HOH . B HOH 8005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc31 I MG MG . B MG 8 1_555 B OD1 ASN 254 B ASN 2254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.931 ? 
metalc ? metalc32 I MG MG . B MG 8 1_555 L O HOH . B HOH 8009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
metalc ? metalc33 I MG MG . B MG 8 1_555 L O HOH . B HOH 8010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? 
metalc ? metalc34 I MG MG . B MG 8 1_555 L O HOH . B HOH 8011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2Q58 
_atom_sites.fract_transf_matrix[1][1]    0.009825 
_atom_sites.fract_transf_matrix[1][2]    0.005673 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011346 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013285 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG A 1 3 3 MG MG . 
D 2 MG A 1 4 4 MG MG . 
E 2 MG A 1 5 5 MG MG . 
F 3 ZOL A 1 1 1 ZOL ZOL . 
G 2 MG B 1 6 6 MG MG . 
H 2 MG B 1 7 7 MG MG . 
I 2 MG B 1 8 8 MG MG . 
J 3 ZOL B 1 2 2 ZOL ZOL . 
K 4 HOH A 1 8001 8001 HOH HOH . 
K 4 HOH A 2 8002 8002 HOH HOH . 
K 4 HOH A 3 8006 8006 HOH HOH . 
K 4 HOH A 4 8007 8007 HOH HOH . 
K 4 HOH A 5 8008 8008 HOH HOH . 
K 4 HOH A 6 8014 8014 HOH HOH . 
K 4 HOH A 7 8017 8017 HOH HOH . 
K 4 HOH A 8 8018 8018 HOH HOH . 
K 4 HOH A 9 8020 8020 HOH HOH . 
K 4 HOH A 10 8021 8021 HOH HOH . 
K 4 HOH A 11 8022 8022 HOH HOH . 
K 4 HOH A 12 8024 8024 HOH HOH . 
K 4 HOH A 13 8026 8026 HOH HOH . 
K 4 HOH A 14 8029 8029 HOH HOH . 
L 4 HOH B 1 8003 8003 HOH HOH . 
L 4 HOH B 2 8004 8004 HOH HOH . 
L 4 HOH B 3 8005 8005 HOH HOH . 
L 4 HOH B 4 8009 8009 HOH HOH . 
L 4 HOH B 5 8010 8010 HOH HOH . 
L 4 HOH B 6 8011 8011 HOH HOH . 
L 4 HOH B 7 8012 8012 HOH HOH . 
L 4 HOH B 8 8013 8013 HOH HOH . 
L 4 HOH B 9 8015 8015 HOH HOH . 
L 4 HOH B 10 8016 8016 HOH HOH . 
L 4 HOH B 11 8019 8019 HOH HOH . 
L 4 HOH B 12 8023 8023 HOH HOH . 
L 4 HOH B 13 8025 8025 HOH HOH . 
L 4 HOH B 14 8027 8027 HOH HOH . 
L 4 HOH B 15 8028 8028 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -0.335 
_atom_site.Cartn_y               21.756 
_atom_site.Cartn_z               52.08 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        35 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           4 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#