data_2Q5E # _model_server_result.job_id mEfiN9yD2_bIuf2qNBusDQ _model_server_result.datetime_utc '2024-10-19 05:26:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2q5e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1}' # _entry.id 2Q5E # _exptl.entry_id 2Q5E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2Q5E _cell.length_a 108.643 _cell.length_b 117.637 _cell.length_c 170.134 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Q5E _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 ? monomeric 1 author_defined_assembly 7 ? monomeric 1 author_defined_assembly 8 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,I,Q 1 1 B,J,R 2 1 C,K,S 3 1 D,L,T 4 1 E,M,U 5 1 F,N,V 6 1 G,O,W 7 1 H,P,X 8 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 I MG MG . A MG 1 1_555 A OD2 ASP 23 A ASP 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc2 I MG MG . A MG 1 1_555 A O ASP 25 A ASP 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? metalc ? metalc3 I MG MG . A MG 1 1_555 A OD1 ASN 134 A ASN 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc4 J MG MG . B MG 1 1_555 B OD2 ASP 23 B ASP 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc5 J MG MG . B MG 1 1_555 B O ASP 25 B ASP 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc6 J MG MG . B MG 1 1_555 B OD1 ASN 134 B ASN 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc7 J MG MG . B MG 1 1_555 R O HOH . B HOH 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc8 J MG MG . B MG 1 1_555 R O HOH . B HOH 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc9 K MG MG . C MG 1 1_555 C OD2 ASP 23 C ASP 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc10 K MG MG . C MG 1 1_555 C O ASP 25 C ASP 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc11 K MG MG . C MG 1 1_555 C OD1 ASN 134 C ASN 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.672 ? metalc ? metalc12 L MG MG . D MG 1 1_555 D OD2 ASP 23 D ASP 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc13 L MG MG . D MG 1 1_555 D O ASP 25 D ASP 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc14 L MG MG . D MG 1 1_555 D OD1 ASN 134 D ASN 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc15 M MG MG . E MG 1 1_555 E OD2 ASP 23 E ASP 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc16 M MG MG . E MG 1 1_555 E O ASP 25 E ASP 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc17 M MG MG . E MG 1 1_555 E OD1 ASN 134 E ASN 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc18 N MG MG . F MG 1 1_555 F OD2 ASP 23 F ASP 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc19 N MG MG . F MG 1 1_555 F O ASP 25 F ASP 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc20 N MG MG . F MG 1 1_555 F OD1 ASN 134 F ASN 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc21 O MG MG . G MG 1 1_555 G OD2 ASP 23 G ASP 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc22 O MG MG . G MG 1 1_555 G O ASP 25 G ASP 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? metalc ? metalc23 O MG MG . G MG 1 1_555 G OD1 ASN 134 G ASN 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc24 P MG MG . H MG 1 1_555 H OD2 ASP 23 H ASP 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc25 P MG MG . H MG 1 1_555 H O ASP 25 H ASP 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc26 P MG MG . H MG 1 1_555 H OD1 ASN 134 H ASN 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2Q5E _atom_sites.fract_transf_matrix[1][1] 0.009204 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008501 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005878 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 MG A 1 1 1 MG MG . J 2 MG B 1 1 1 MG MG . K 2 MG C 1 1 1 MG MG . L 2 MG D 1 1 1 MG MG . M 2 MG E 1 1 1 MG MG . N 2 MG F 1 1 1 MG MG . O 2 MG G 1 1 1 MG MG . P 2 MG H 1 1 1 MG MG . Q 3 HOH A 1 272 3 HOH HOH . Q 3 HOH A 2 273 4 HOH HOH . Q 3 HOH A 3 274 19 HOH HOH . Q 3 HOH A 4 275 31 HOH HOH . Q 3 HOH A 5 276 35 HOH HOH . Q 3 HOH A 6 277 76 HOH HOH . Q 3 HOH A 7 278 107 HOH HOH . Q 3 HOH A 8 279 151 HOH HOH . Q 3 HOH A 9 280 176 HOH HOH . Q 3 HOH A 10 281 298 HOH HOH . Q 3 HOH A 11 282 312 HOH HOH . R 3 HOH B 1 272 2 HOH HOH . R 3 HOH B 2 273 6 HOH HOH . R 3 HOH B 3 274 7 HOH HOH . R 3 HOH B 4 275 28 HOH HOH . R 3 HOH B 5 276 50 HOH HOH . R 3 HOH B 6 277 69 HOH HOH . R 3 HOH B 7 278 124 HOH HOH . R 3 HOH B 8 279 127 HOH HOH . R 3 HOH B 9 280 171 HOH HOH . R 3 HOH B 10 281 201 HOH HOH . R 3 HOH B 11 282 256 HOH HOH . R 3 HOH B 12 283 280 HOH HOH . S 3 HOH C 1 272 20 HOH HOH . S 3 HOH C 2 273 25 HOH HOH . S 3 HOH C 3 274 68 HOH HOH . S 3 HOH C 4 275 138 HOH HOH . S 3 HOH C 5 276 142 HOH HOH . S 3 HOH C 6 277 163 HOH HOH . S 3 HOH C 7 278 175 HOH HOH . S 3 HOH C 8 279 241 HOH HOH . S 3 HOH C 9 280 317 HOH HOH . S 3 HOH C 10 281 345 HOH HOH . S 3 HOH C 11 282 367 HOH HOH . T 3 HOH D 1 272 23 HOH HOH . T 3 HOH D 2 273 47 HOH HOH . T 3 HOH D 3 274 58 HOH HOH . T 3 HOH D 4 275 77 HOH HOH . T 3 HOH D 5 276 88 HOH HOH . T 3 HOH D 6 277 104 HOH HOH . T 3 HOH D 7 278 210 HOH HOH . T 3 HOH D 8 279 216 HOH HOH . T 3 HOH D 9 280 233 HOH HOH . T 3 HOH D 10 281 239 HOH HOH . T 3 HOH D 11 282 240 HOH HOH . U 3 HOH E 1 272 13 HOH HOH . U 3 HOH E 2 273 16 HOH HOH . U 3 HOH E 3 274 39 HOH HOH . U 3 HOH E 4 275 95 HOH HOH . U 3 HOH E 5 276 186 HOH HOH . U 3 HOH E 6 277 214 HOH HOH . U 3 HOH E 7 278 271 HOH HOH . U 3 HOH E 8 279 279 HOH HOH . U 3 HOH E 9 280 284 HOH HOH . U 3 HOH E 10 281 359 HOH HOH . U 3 HOH E 11 282 365 HOH HOH . V 3 HOH F 1 272 5 HOH HOH . V 3 HOH F 2 273 22 HOH HOH . V 3 HOH F 3 274 53 HOH HOH . V 3 HOH F 4 275 63 HOH HOH . V 3 HOH F 5 276 140 HOH HOH . V 3 HOH F 6 277 244 HOH HOH . V 3 HOH F 7 278 262 HOH HOH . W 3 HOH G 1 272 14 HOH HOH . W 3 HOH G 2 273 24 HOH HOH . W 3 HOH G 3 274 37 HOH HOH . W 3 HOH G 4 275 52 HOH HOH . W 3 HOH G 5 276 119 HOH HOH . W 3 HOH G 6 277 134 HOH HOH . W 3 HOH G 7 278 183 HOH HOH . W 3 HOH G 8 279 184 HOH HOH . W 3 HOH G 9 280 329 HOH HOH . W 3 HOH G 10 281 348 HOH HOH . W 3 HOH G 11 282 368 HOH HOH . X 3 HOH H 1 272 12 HOH HOH . X 3 HOH H 2 273 15 HOH HOH . X 3 HOH H 3 274 32 HOH HOH . X 3 HOH H 4 275 44 HOH HOH . X 3 HOH H 5 276 46 HOH HOH . X 3 HOH H 6 277 48 HOH HOH . X 3 HOH H 7 278 61 HOH HOH . X 3 HOH H 8 279 65 HOH HOH . X 3 HOH H 9 280 78 HOH HOH . X 3 HOH H 10 281 90 HOH HOH . X 3 HOH H 11 282 99 HOH HOH . X 3 HOH H 12 283 103 HOH HOH . X 3 HOH H 13 284 136 HOH HOH . X 3 HOH H 14 285 159 HOH HOH . X 3 HOH H 15 286 182 HOH HOH . X 3 HOH H 16 287 242 HOH HOH . X 3 HOH H 17 288 341 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 2 _atom_site.Cartn_x 37.49 _atom_site.Cartn_y 26.403 _atom_site.Cartn_z -11.19 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 60.89 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #