data_2Q7E # _model_server_result.job_id Ek3v93uvy6r1LF3C50a0rQ _model_server_result.datetime_utc '2025-01-11 04:47:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2q7e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":903}' # _entry.id 2Q7E # _exptl.entry_id 2Q7E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2Q7E _cell.length_a 105.124 _cell.length_b 105.124 _cell.length_c 70.314 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Q7E _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 52.562 91.040055 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 233 A GLU 396 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc2 A OE1 GLU 233 A GLU 396 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc3 A OG SER 236 A SER 399 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc4 B MG MG . A MG 501 1_555 D O2G ANP . A ANP 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc5 B MG MG . A MG 501 1_555 D O2B ANP . A ANP 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc6 B MG MG . A MG 501 1_555 P O HOH . A HOH 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc7 B MG MG . A MG 501 1_555 P O HOH . A HOH 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc8 B MG MG . A MG 501 1_555 P O HOH . A HOH 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc9 B MG MG . A MG 501 1_555 P O HOH . A HOH 1014 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc10 C MG MG . A MG 502 1_555 D O1B ANP . A ANP 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc11 C MG MG . A MG 502 1_555 D O2A ANP . A ANP 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc12 C MG MG . A MG 502 1_555 P O HOH . A HOH 1117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 133 n n C1 C2 EDO sing 134 n n C1 H11 EDO sing 135 n n C1 H12 EDO sing 136 n n O1 HO1 EDO sing 137 n n C2 O2 EDO sing 138 n n C2 H21 EDO sing 139 n n C2 H22 EDO sing 140 n n O2 HO2 EDO sing 141 n n # _atom_sites.entry_id 2Q7E _atom_sites.fract_transf_matrix[1][1] 0.009513 _atom_sites.fract_transf_matrix[1][2] 0.005492 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010984 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014222 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 501 501 MG MG . C 2 MG A 1 502 502 MG MG . D 3 ANP A 1 900 900 ANP ANP . E 4 EDO A 1 901 901 EDO EDO . F 4 EDO A 1 902 902 EDO EDO . G 4 EDO A 1 903 903 EDO EDO . H 4 EDO A 1 904 904 EDO EDO . I 4 EDO A 1 905 905 EDO EDO . J 4 EDO A 1 906 906 EDO EDO . K 4 EDO A 1 907 907 EDO EDO . L 4 EDO A 1 908 908 EDO EDO . M 4 EDO A 1 909 909 EDO EDO . N 4 EDO A 1 910 910 EDO EDO . O 4 EDO A 1 911 911 EDO EDO . P 5 HOH A 1 912 1 HOH HOH . P 5 HOH A 2 913 2 HOH HOH . P 5 HOH A 3 914 3 HOH HOH . P 5 HOH A 4 915 4 HOH HOH . P 5 HOH A 5 916 5 HOH HOH . P 5 HOH A 6 917 7 HOH HOH . P 5 HOH A 7 918 8 HOH HOH . P 5 HOH A 8 919 9 HOH HOH . P 5 HOH A 9 920 10 HOH HOH . P 5 HOH A 10 921 11 HOH HOH . P 5 HOH A 11 922 12 HOH HOH . P 5 HOH A 12 923 13 HOH HOH . P 5 HOH A 13 924 14 HOH HOH . P 5 HOH A 14 925 15 HOH HOH . P 5 HOH A 15 926 16 HOH HOH . P 5 HOH A 16 927 18 HOH HOH . P 5 HOH A 17 928 20 HOH HOH . P 5 HOH A 18 929 21 HOH HOH . P 5 HOH A 19 930 22 HOH HOH . P 5 HOH A 20 931 23 HOH HOH . P 5 HOH A 21 932 24 HOH HOH . P 5 HOH A 22 933 25 HOH HOH . P 5 HOH A 23 934 26 HOH HOH . P 5 HOH A 24 935 27 HOH HOH . P 5 HOH A 25 936 28 HOH HOH . P 5 HOH A 26 937 29 HOH HOH . P 5 HOH A 27 938 30 HOH HOH . P 5 HOH A 28 939 31 HOH HOH . P 5 HOH A 29 940 32 HOH HOH . P 5 HOH A 30 941 33 HOH HOH . P 5 HOH A 31 942 34 HOH HOH . P 5 HOH A 32 943 35 HOH HOH . P 5 HOH A 33 944 36 HOH HOH . P 5 HOH A 34 945 37 HOH HOH . P 5 HOH A 35 946 38 HOH HOH . P 5 HOH A 36 947 39 HOH HOH . P 5 HOH A 37 948 40 HOH HOH . P 5 HOH A 38 949 41 HOH HOH . P 5 HOH A 39 950 42 HOH HOH . P 5 HOH A 40 951 43 HOH HOH . P 5 HOH A 41 952 44 HOH HOH . P 5 HOH A 42 953 45 HOH HOH . P 5 HOH A 43 954 46 HOH HOH . P 5 HOH A 44 955 47 HOH HOH . P 5 HOH A 45 956 48 HOH HOH . P 5 HOH A 46 957 49 HOH HOH . P 5 HOH A 47 958 50 HOH HOH . P 5 HOH A 48 959 51 HOH HOH . P 5 HOH A 49 960 53 HOH HOH . P 5 HOH A 50 961 54 HOH HOH . P 5 HOH A 51 962 55 HOH HOH . P 5 HOH A 52 963 56 HOH HOH . P 5 HOH A 53 964 57 HOH HOH . P 5 HOH A 54 965 58 HOH HOH . P 5 HOH A 55 966 59 HOH HOH . P 5 HOH A 56 967 60 HOH HOH . P 5 HOH A 57 968 61 HOH HOH . P 5 HOH A 58 969 62 HOH HOH . P 5 HOH A 59 970 63 HOH HOH . P 5 HOH A 60 971 64 HOH HOH . P 5 HOH A 61 972 65 HOH HOH . P 5 HOH A 62 973 66 HOH HOH . P 5 HOH A 63 974 67 HOH HOH . P 5 HOH A 64 975 68 HOH HOH . P 5 HOH A 65 976 69 HOH HOH . P 5 HOH A 66 977 70 HOH HOH . P 5 HOH A 67 978 71 HOH HOH . P 5 HOH A 68 979 72 HOH HOH . P 5 HOH A 69 980 73 HOH HOH . P 5 HOH A 70 981 74 HOH HOH . P 5 HOH A 71 982 75 HOH HOH . P 5 HOH A 72 983 76 HOH HOH . P 5 HOH A 73 984 77 HOH HOH . P 5 HOH A 74 985 78 HOH HOH . P 5 HOH A 75 986 79 HOH HOH . P 5 HOH A 76 987 81 HOH HOH . P 5 HOH A 77 988 82 HOH HOH . P 5 HOH A 78 989 83 HOH HOH . P 5 HOH A 79 990 84 HOH HOH . P 5 HOH A 80 991 85 HOH HOH . P 5 HOH A 81 992 86 HOH HOH . P 5 HOH A 82 993 87 HOH HOH . P 5 HOH A 83 994 88 HOH HOH . P 5 HOH A 84 995 89 HOH HOH . P 5 HOH A 85 996 90 HOH HOH . P 5 HOH A 86 997 91 HOH HOH . P 5 HOH A 87 998 92 HOH HOH . P 5 HOH A 88 999 93 HOH HOH . P 5 HOH A 89 1000 94 HOH HOH . P 5 HOH A 90 1001 95 HOH HOH . P 5 HOH A 91 1002 96 HOH HOH . P 5 HOH A 92 1003 97 HOH HOH . P 5 HOH A 93 1004 98 HOH HOH . P 5 HOH A 94 1005 99 HOH HOH . P 5 HOH A 95 1006 101 HOH HOH . P 5 HOH A 96 1007 102 HOH HOH . P 5 HOH A 97 1008 103 HOH HOH . P 5 HOH A 98 1009 104 HOH HOH . P 5 HOH A 99 1010 105 HOH HOH . P 5 HOH A 100 1011 106 HOH HOH . P 5 HOH A 101 1012 108 HOH HOH . P 5 HOH A 102 1013 112 HOH HOH . P 5 HOH A 103 1014 113 HOH HOH . P 5 HOH A 104 1015 114 HOH HOH . P 5 HOH A 105 1016 115 HOH HOH . P 5 HOH A 106 1017 116 HOH HOH . P 5 HOH A 107 1018 117 HOH HOH . P 5 HOH A 108 1019 119 HOH HOH . P 5 HOH A 109 1020 120 HOH HOH . P 5 HOH A 110 1021 121 HOH HOH . P 5 HOH A 111 1022 122 HOH HOH . P 5 HOH A 112 1023 124 HOH HOH . P 5 HOH A 113 1024 125 HOH HOH . P 5 HOH A 114 1025 126 HOH HOH . P 5 HOH A 115 1026 127 HOH HOH . P 5 HOH A 116 1027 128 HOH HOH . P 5 HOH A 117 1028 129 HOH HOH . P 5 HOH A 118 1029 130 HOH HOH . P 5 HOH A 119 1030 131 HOH HOH . P 5 HOH A 120 1031 132 HOH HOH . P 5 HOH A 121 1032 133 HOH HOH . P 5 HOH A 122 1033 134 HOH HOH . P 5 HOH A 123 1034 135 HOH HOH . P 5 HOH A 124 1035 136 HOH HOH . P 5 HOH A 125 1036 138 HOH HOH . P 5 HOH A 126 1037 139 HOH HOH . P 5 HOH A 127 1038 140 HOH HOH . P 5 HOH A 128 1039 141 HOH HOH . P 5 HOH A 129 1040 142 HOH HOH . P 5 HOH A 130 1041 144 HOH HOH . P 5 HOH A 131 1042 145 HOH HOH . P 5 HOH A 132 1043 146 HOH HOH . P 5 HOH A 133 1044 148 HOH HOH . P 5 HOH A 134 1045 151 HOH HOH . P 5 HOH A 135 1046 152 HOH HOH . P 5 HOH A 136 1047 153 HOH HOH . P 5 HOH A 137 1048 154 HOH HOH . P 5 HOH A 138 1049 155 HOH HOH . P 5 HOH A 139 1050 158 HOH HOH . P 5 HOH A 140 1051 160 HOH HOH . P 5 HOH A 141 1052 161 HOH HOH . P 5 HOH A 142 1053 162 HOH HOH . P 5 HOH A 143 1054 163 HOH HOH . P 5 HOH A 144 1055 165 HOH HOH . P 5 HOH A 145 1056 166 HOH HOH . P 5 HOH A 146 1057 167 HOH HOH . P 5 HOH A 147 1058 169 HOH HOH . P 5 HOH A 148 1059 172 HOH HOH . P 5 HOH A 149 1060 173 HOH HOH . P 5 HOH A 150 1061 174 HOH HOH . P 5 HOH A 151 1062 175 HOH HOH . P 5 HOH A 152 1063 176 HOH HOH . P 5 HOH A 153 1064 177 HOH HOH . P 5 HOH A 154 1065 178 HOH HOH . P 5 HOH A 155 1066 179 HOH HOH . P 5 HOH A 156 1067 181 HOH HOH . P 5 HOH A 157 1068 182 HOH HOH . P 5 HOH A 158 1069 183 HOH HOH . P 5 HOH A 159 1070 184 HOH HOH . P 5 HOH A 160 1071 185 HOH HOH . P 5 HOH A 161 1072 186 HOH HOH . P 5 HOH A 162 1073 187 HOH HOH . P 5 HOH A 163 1074 188 HOH HOH . P 5 HOH A 164 1075 189 HOH HOH . P 5 HOH A 165 1076 190 HOH HOH . P 5 HOH A 166 1077 191 HOH HOH . P 5 HOH A 167 1078 192 HOH HOH . P 5 HOH A 168 1079 193 HOH HOH . P 5 HOH A 169 1080 194 HOH HOH . P 5 HOH A 170 1081 195 HOH HOH . P 5 HOH A 171 1082 196 HOH HOH . P 5 HOH A 172 1083 197 HOH HOH . P 5 HOH A 173 1084 198 HOH HOH . P 5 HOH A 174 1085 199 HOH HOH . P 5 HOH A 175 1086 200 HOH HOH . P 5 HOH A 176 1087 204 HOH HOH . P 5 HOH A 177 1088 205 HOH HOH . P 5 HOH A 178 1089 206 HOH HOH . P 5 HOH A 179 1090 207 HOH HOH . P 5 HOH A 180 1091 208 HOH HOH . P 5 HOH A 181 1092 209 HOH HOH . P 5 HOH A 182 1093 210 HOH HOH . P 5 HOH A 183 1094 212 HOH HOH . P 5 HOH A 184 1095 213 HOH HOH . P 5 HOH A 185 1096 214 HOH HOH . P 5 HOH A 186 1097 215 HOH HOH . P 5 HOH A 187 1098 216 HOH HOH . P 5 HOH A 188 1099 217 HOH HOH . P 5 HOH A 189 1100 218 HOH HOH . P 5 HOH A 190 1101 219 HOH HOH . P 5 HOH A 191 1102 220 HOH HOH . P 5 HOH A 192 1103 221 HOH HOH . P 5 HOH A 193 1104 222 HOH HOH . P 5 HOH A 194 1105 223 HOH HOH . P 5 HOH A 195 1106 224 HOH HOH . P 5 HOH A 196 1107 225 HOH HOH . P 5 HOH A 197 1108 226 HOH HOH . P 5 HOH A 198 1109 227 HOH HOH . P 5 HOH A 199 1110 228 HOH HOH . P 5 HOH A 200 1111 229 HOH HOH . P 5 HOH A 201 1112 230 HOH HOH . P 5 HOH A 202 1113 231 HOH HOH . P 5 HOH A 203 1114 232 HOH HOH . P 5 HOH A 204 1115 233 HOH HOH . P 5 HOH A 205 1116 234 HOH HOH . P 5 HOH A 206 1117 235 HOH HOH . P 5 HOH A 207 1118 236 HOH HOH . P 5 HOH A 208 1119 237 HOH HOH . P 5 HOH A 209 1120 238 HOH HOH . P 5 HOH A 210 1121 239 HOH HOH . P 5 HOH A 211 1122 240 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . G 4 16.51 43.289 11.838 1 58.83 ? C1 EDO 903 A 1 HETATM 2 O O1 EDO . . . G 4 17.405 43.289 10.721 1 64.27 ? O1 EDO 903 A 1 HETATM 3 C C2 EDO . . . G 4 15.162 43.844 11.432 1 60.84 ? C2 EDO 903 A 1 HETATM 4 O O2 EDO . . . G 4 15.338 45.23 11.172 1 55.79 ? O2 EDO 903 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 358 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #