data_2Q88
#
_model_server_result.job_id            ipWjn6MOr91gpJOyFIbsaA 
_model_server_result.datetime_utc      '2024-11-20 00:33:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2q88 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":602}' 
#
_entry.id    2Q88 
#
_exptl.entry_id    2Q88 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              112.411 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CADMIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2Q88 
_cell.length_a            57.365 
_cell.length_b            57.365 
_cell.length_c            161.883 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2Q88 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 87 A CYS 86 1_555 A SG CYS 254 A CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf2 A SG CYS 98 A CYS 97 1_555 A SG CYS 202 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
metalc ? metalc1 A OG SER 57 A SER 56 1_555 E CD CD . A CD 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? 
metalc ? metalc2 A NE2 HIS 73 A HIS 72 1_555 E CD CD . A CD 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? 
metalc ? metalc3 A OE1 GLU 212 A GLU 211 1_555 D CD CD . A CD 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
metalc ? metalc4 A OD2 ASP 216 A ASP 215 1_555 D CD CD . A CD 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? 
metalc ? metalc5 A OE2 GLU 251 A GLU 250 1_555 B CD CD . A CD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? 
metalc ? metalc6 B CD CD . A CD 601 1_555 G O HOH . A HOH 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? 
metalc ? metalc7 B CD CD . A CD 601 1_555 G O HOH . A HOH 648 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc8 C CD CD . A CD 602 1_555 G O HOH . A HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? 
metalc ? metalc9 C CD CD . A CD 602 1_555 G O HOH . A HOH 669 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? 
metalc ? metalc10 C CD CD . A CD 602 1_555 G O HOH . A HOH 673 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
metalc ? metalc11 D CD CD . A CD 603 1_555 G O HOH . A HOH 679 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc12 D CD CD . A CD 603 1_555 G O HOH . A HOH 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? 
metalc ? metalc13 E CD CD . A CD 604 1_555 G O HOH . A HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
#
_chem_comp.formula           'Cd 2' 
_chem_comp.formula_weight    112.411 
_chem_comp.id                CD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CADMIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2Q88 
_atom_sites.fract_transf_matrix[1][1]    0.017432 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017432 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006177 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CD A 1 601 601 CD CD . 
C 2 CD A 1 602 602 CD CD . 
D 2 CD A 1 603 603 CD CD . 
E 2 CD A 1 604 604 CD CD . 
F 3 4CS A 1 501 501 4CS 4CS . 
G 4 HOH A 1 605 1 HOH HOH . 
G 4 HOH A 2 606 2 HOH HOH . 
G 4 HOH A 3 607 3 HOH HOH . 
G 4 HOH A 4 608 4 HOH HOH . 
G 4 HOH A 5 609 5 HOH HOH . 
G 4 HOH A 6 610 6 HOH HOH . 
G 4 HOH A 7 611 7 HOH HOH . 
G 4 HOH A 8 612 8 HOH HOH . 
G 4 HOH A 9 613 9 HOH HOH . 
G 4 HOH A 10 614 10 HOH HOH . 
G 4 HOH A 11 615 11 HOH HOH . 
G 4 HOH A 12 616 12 HOH HOH . 
G 4 HOH A 13 617 13 HOH HOH . 
G 4 HOH A 14 618 14 HOH HOH . 
G 4 HOH A 15 619 15 HOH HOH . 
G 4 HOH A 16 620 16 HOH HOH . 
G 4 HOH A 17 621 17 HOH HOH . 
G 4 HOH A 18 622 18 HOH HOH . 
G 4 HOH A 19 623 19 HOH HOH . 
G 4 HOH A 20 624 20 HOH HOH . 
G 4 HOH A 21 625 21 HOH HOH . 
G 4 HOH A 22 626 22 HOH HOH . 
G 4 HOH A 23 627 23 HOH HOH . 
G 4 HOH A 24 628 24 HOH HOH . 
G 4 HOH A 25 629 25 HOH HOH . 
G 4 HOH A 26 630 26 HOH HOH . 
G 4 HOH A 27 631 27 HOH HOH . 
G 4 HOH A 28 632 28 HOH HOH . 
G 4 HOH A 29 633 29 HOH HOH . 
G 4 HOH A 30 634 30 HOH HOH . 
G 4 HOH A 31 635 31 HOH HOH . 
G 4 HOH A 32 636 32 HOH HOH . 
G 4 HOH A 33 637 33 HOH HOH . 
G 4 HOH A 34 638 34 HOH HOH . 
G 4 HOH A 35 639 35 HOH HOH . 
G 4 HOH A 36 640 36 HOH HOH . 
G 4 HOH A 37 641 37 HOH HOH . 
G 4 HOH A 38 642 38 HOH HOH . 
G 4 HOH A 39 643 39 HOH HOH . 
G 4 HOH A 40 644 40 HOH HOH . 
G 4 HOH A 41 645 41 HOH HOH . 
G 4 HOH A 42 646 42 HOH HOH . 
G 4 HOH A 43 647 43 HOH HOH . 
G 4 HOH A 44 648 44 HOH HOH . 
G 4 HOH A 45 649 45 HOH HOH . 
G 4 HOH A 46 650 46 HOH HOH . 
G 4 HOH A 47 651 47 HOH HOH . 
G 4 HOH A 48 652 48 HOH HOH . 
G 4 HOH A 49 653 49 HOH HOH . 
G 4 HOH A 50 654 50 HOH HOH . 
G 4 HOH A 51 655 51 HOH HOH . 
G 4 HOH A 52 656 52 HOH HOH . 
G 4 HOH A 53 657 53 HOH HOH . 
G 4 HOH A 54 658 54 HOH HOH . 
G 4 HOH A 55 659 55 HOH HOH . 
G 4 HOH A 56 660 56 HOH HOH . 
G 4 HOH A 57 661 57 HOH HOH . 
G 4 HOH A 58 662 58 HOH HOH . 
G 4 HOH A 59 663 59 HOH HOH . 
G 4 HOH A 60 664 60 HOH HOH . 
G 4 HOH A 61 665 61 HOH HOH . 
G 4 HOH A 62 666 62 HOH HOH . 
G 4 HOH A 63 667 63 HOH HOH . 
G 4 HOH A 64 668 64 HOH HOH . 
G 4 HOH A 65 669 65 HOH HOH . 
G 4 HOH A 66 670 66 HOH HOH . 
G 4 HOH A 67 671 67 HOH HOH . 
G 4 HOH A 68 672 68 HOH HOH . 
G 4 HOH A 69 673 69 HOH HOH . 
G 4 HOH A 70 674 70 HOH HOH . 
G 4 HOH A 71 675 71 HOH HOH . 
G 4 HOH A 72 676 72 HOH HOH . 
G 4 HOH A 73 677 73 HOH HOH . 
G 4 HOH A 74 678 74 HOH HOH . 
G 4 HOH A 75 679 75 HOH HOH . 
G 4 HOH A 76 680 76 HOH HOH . 
G 4 HOH A 77 681 77 HOH HOH . 
G 4 HOH A 78 682 78 HOH HOH . 
G 4 HOH A 79 683 79 HOH HOH . 
G 4 HOH A 80 684 80 HOH HOH . 
G 4 HOH A 81 685 81 HOH HOH . 
G 4 HOH A 82 686 82 HOH HOH . 
G 4 HOH A 83 687 83 HOH HOH . 
G 4 HOH A 84 688 84 HOH HOH . 
G 4 HOH A 85 689 85 HOH HOH . 
G 4 HOH A 86 690 86 HOH HOH . 
G 4 HOH A 87 691 87 HOH HOH . 
G 4 HOH A 88 692 88 HOH HOH . 
G 4 HOH A 89 693 89 HOH HOH . 
G 4 HOH A 90 694 90 HOH HOH . 
G 4 HOH A 91 695 91 HOH HOH . 
G 4 HOH A 92 696 92 HOH HOH . 
G 4 HOH A 93 697 93 HOH HOH . 
G 4 HOH A 94 698 94 HOH HOH . 
G 4 HOH A 95 699 95 HOH HOH . 
G 4 HOH A 96 700 96 HOH HOH . 
G 4 HOH A 97 701 97 HOH HOH . 
G 4 HOH A 98 702 98 HOH HOH . 
G 4 HOH A 99 703 99 HOH HOH . 
G 4 HOH A 100 704 100 HOH HOH . 
G 4 HOH A 101 705 101 HOH HOH . 
G 4 HOH A 102 706 102 HOH HOH . 
G 4 HOH A 103 707 103 HOH HOH . 
G 4 HOH A 104 708 104 HOH HOH . 
G 4 HOH A 105 709 105 HOH HOH . 
G 4 HOH A 106 710 106 HOH HOH . 
G 4 HOH A 107 711 107 HOH HOH . 
G 4 HOH A 108 712 108 HOH HOH . 
G 4 HOH A 109 713 109 HOH HOH . 
G 4 HOH A 110 714 110 HOH HOH . 
G 4 HOH A 111 715 111 HOH HOH . 
G 4 HOH A 112 716 112 HOH HOH . 
G 4 HOH A 113 717 113 HOH HOH . 
G 4 HOH A 114 718 114 HOH HOH . 
G 4 HOH A 115 719 115 HOH HOH . 
G 4 HOH A 116 720 116 HOH HOH . 
G 4 HOH A 117 721 117 HOH HOH . 
G 4 HOH A 118 722 118 HOH HOH . 
G 4 HOH A 119 723 119 HOH HOH . 
G 4 HOH A 120 724 120 HOH HOH . 
G 4 HOH A 121 725 121 HOH HOH . 
G 4 HOH A 122 726 122 HOH HOH . 
G 4 HOH A 123 727 123 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CD 
_atom_site.label_atom_id         CD 
_atom_site.label_comp_id         CD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               22.049 
_atom_site.Cartn_y               27.803 
_atom_site.Cartn_z               43.026 
_atom_site.occupancy             0.6 
_atom_site.B_iso_or_equiv        33.54 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CD 
_atom_site.auth_comp_id          CD 
_atom_site.auth_seq_id           602 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#