data_2Q8J # _model_server_result.job_id pRFOXS9LgTA4izxSJsoAbg _model_server_result.datetime_utc '2024-11-17 00:24:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2q8j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":804}' # _entry.id 2Q8J # _exptl.entry_id 2Q8J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.8 _cell.angle_gamma 90 _cell.entry_id 2Q8J _cell.length_a 63.4 _cell.length_b 50.3 _cell.length_c 65.9 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Q8J _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 H N N ? 8 I N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 2 MAN NAG C1 O1 . O4 HO4 . sing 3 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG S 702 NAG 2 n B NAG 2 B 2 NAG S 703 NAG 2 n B MAN 3 B 3 MAN S 704 MAN 3 n C NAG 1 C 1 NAG T 705 NAG 3 n C NAG 2 C 2 NAG T 706 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 348 1_555 A SG CYS 39 A CYS 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? disulf ? disulf2 A SG CYS 17 A CYS 358 1_555 A SG CYS 30 A CYS 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? disulf ? disulf3 A SG CYS 64 A CYS 405 1_555 A SG CYS 343 A CYS 684 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf4 A SG CYS 84 A CYS 425 1_555 A SG CYS 306 A CYS 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf5 A SG CYS 116 A CYS 457 1_555 A SG CYS 191 A CYS 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf6 A SG CYS 140 A CYS 481 1_555 A SG CYS 334 A CYS 675 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? disulf ? disulf7 A SG CYS 150 A CYS 491 1_555 A SG CYS 164 A CYS 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? disulf ? disulf8 A SG CYS 161 A CYS 502 1_555 A SG CYS 174 A CYS 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf9 A SG CYS 232 A CYS 573 1_555 A SG CYS 246 A CYS 587 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf10 A SG CYS 284 A CYS 625 1_555 A SG CYS 289 A CYS 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? covale ? covale1 A ND2 ASN 27 A ASN 368 1_555 D C1 NAG . A NAG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale2 A ND2 ASN 135 A ASN 476 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale3 A ND2 ASN 204 A ASN 545 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale4 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.485 ? covale ? covale5 B O4 NAG . B NAG 2 1_555 B C1 MAN . B MAN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.468 ? covale ? covale6 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? metalc ? metalc1 L O HOH . A HOH 35 1_555 H ZN ZN . A ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc2 L O HOH . A HOH 75 1_555 I ZN ZN . A ZN 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc3 A OD1 ASP 54 A ASP 395 1_555 F FE FE . A FE 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc4 A OH TYR 92 A TYR 433 1_555 F FE FE . A FE 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc5 A OH TYR 185 A TYR 526 1_555 F FE FE . A FE 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.72 ? metalc ? metalc6 A NE2 HIS 247 A HIS 588 1_555 I ZN ZN . A ZN 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc7 A NE2 HIS 254 A HIS 595 1_555 F FE FE . A FE 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc8 A OE2 GLU 318 A GLU 659 1_555 H ZN ZN . A ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc9 A OE1 GLU 318 A GLU 659 1_555 H ZN ZN . A ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc10 F FE FE . A FE 801 1_555 G O1 CO3 . A CO3 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc11 F FE FE . A FE 801 1_555 G O2 CO3 . A CO3 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2Q8J _atom_sites.fract_transf_matrix[1][1] 0.015773 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005064 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019881 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015937 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG A 1 701 701 NAG NAG . E 5 BMA A 1 708 708 BMA BMA . F 6 FE A 1 801 801 FE FE . G 7 CO3 A 1 802 802 CO3 CO3 . H 8 ZN A 1 803 803 ZN ZN . I 8 ZN A 1 804 804 ZN ZN . J 9 SO4 A 1 805 805 SO4 SO4 . K 10 M2P A 1 707 707 M2P M2P . L 11 HOH A 1 1 1 HOH HOH . L 11 HOH A 2 2 2 HOH HOH . L 11 HOH A 3 3 3 HOH HOH . L 11 HOH A 4 4 4 HOH HOH . L 11 HOH A 5 5 5 HOH HOH . L 11 HOH A 6 6 6 HOH HOH . L 11 HOH A 7 7 7 HOH HOH . L 11 HOH A 8 8 8 HOH HOH . L 11 HOH A 9 9 9 HOH HOH . L 11 HOH A 10 10 10 HOH HOH . L 11 HOH A 11 11 11 HOH HOH . L 11 HOH A 12 12 12 HOH HOH . L 11 HOH A 13 13 13 HOH HOH . L 11 HOH A 14 14 14 HOH HOH . L 11 HOH A 15 15 15 HOH HOH . L 11 HOH A 16 16 16 HOH HOH . L 11 HOH A 17 17 17 HOH HOH . L 11 HOH A 18 18 18 HOH HOH . L 11 HOH A 19 19 19 HOH HOH . L 11 HOH A 20 20 20 HOH HOH . L 11 HOH A 21 21 21 HOH HOH . L 11 HOH A 22 22 22 HOH HOH . L 11 HOH A 23 23 23 HOH HOH . L 11 HOH A 24 24 24 HOH HOH . L 11 HOH A 25 25 25 HOH HOH . L 11 HOH A 26 26 26 HOH HOH . L 11 HOH A 27 27 27 HOH HOH . L 11 HOH A 28 28 28 HOH HOH . L 11 HOH A 29 29 29 HOH HOH . L 11 HOH A 30 30 30 HOH HOH . L 11 HOH A 31 31 31 HOH HOH . L 11 HOH A 32 32 32 HOH HOH . L 11 HOH A 33 33 33 HOH HOH . L 11 HOH A 34 34 34 HOH HOH . L 11 HOH A 35 35 35 HOH HOH . L 11 HOH A 36 36 36 HOH HOH . L 11 HOH A 37 37 37 HOH HOH . L 11 HOH A 38 38 38 HOH HOH . L 11 HOH A 39 39 39 HOH HOH . L 11 HOH A 40 40 40 HOH HOH . L 11 HOH A 41 41 41 HOH HOH . L 11 HOH A 42 42 42 HOH HOH . L 11 HOH A 43 43 43 HOH HOH . L 11 HOH A 44 44 44 HOH HOH . L 11 HOH A 45 45 45 HOH HOH . L 11 HOH A 46 46 46 HOH HOH . L 11 HOH A 47 47 47 HOH HOH . L 11 HOH A 48 48 48 HOH HOH . L 11 HOH A 49 49 49 HOH HOH . L 11 HOH A 50 50 50 HOH HOH . L 11 HOH A 51 51 51 HOH HOH . L 11 HOH A 52 52 52 HOH HOH . L 11 HOH A 53 53 53 HOH HOH . L 11 HOH A 54 54 54 HOH HOH . L 11 HOH A 55 55 55 HOH HOH . L 11 HOH A 56 56 56 HOH HOH . L 11 HOH A 57 57 57 HOH HOH . L 11 HOH A 58 58 58 HOH HOH . L 11 HOH A 59 59 59 HOH HOH . L 11 HOH A 60 60 60 HOH HOH . L 11 HOH A 61 61 61 HOH HOH . L 11 HOH A 62 62 62 HOH HOH . L 11 HOH A 63 63 63 HOH HOH . L 11 HOH A 64 64 64 HOH HOH . L 11 HOH A 65 65 65 HOH HOH . L 11 HOH A 66 66 66 HOH HOH . L 11 HOH A 67 67 67 HOH HOH . L 11 HOH A 68 68 68 HOH HOH . L 11 HOH A 69 69 69 HOH HOH . L 11 HOH A 70 70 70 HOH HOH . L 11 HOH A 71 71 71 HOH HOH . L 11 HOH A 72 72 72 HOH HOH . L 11 HOH A 73 73 73 HOH HOH . L 11 HOH A 74 74 74 HOH HOH . L 11 HOH A 75 75 75 HOH HOH . L 11 HOH A 76 76 76 HOH HOH . L 11 HOH A 77 77 77 HOH HOH . L 11 HOH A 78 78 78 HOH HOH . L 11 HOH A 79 79 79 HOH HOH . L 11 HOH A 80 80 80 HOH HOH . L 11 HOH A 81 81 81 HOH HOH . L 11 HOH A 82 82 82 HOH HOH . L 11 HOH A 83 83 83 HOH HOH . L 11 HOH A 84 84 84 HOH HOH . L 11 HOH A 85 85 85 HOH HOH . L 11 HOH A 86 86 86 HOH HOH . L 11 HOH A 87 87 87 HOH HOH . L 11 HOH A 88 88 88 HOH HOH . L 11 HOH A 89 89 89 HOH HOH . L 11 HOH A 90 90 90 HOH HOH . L 11 HOH A 91 91 91 HOH HOH . L 11 HOH A 92 92 92 HOH HOH . L 11 HOH A 93 93 93 HOH HOH . L 11 HOH A 94 94 94 HOH HOH . L 11 HOH A 95 95 95 HOH HOH . L 11 HOH A 96 96 96 HOH HOH . L 11 HOH A 97 97 97 HOH HOH . L 11 HOH A 98 98 98 HOH HOH . L 11 HOH A 99 99 99 HOH HOH . L 11 HOH A 100 100 100 HOH HOH . L 11 HOH A 101 101 101 HOH HOH . L 11 HOH A 102 102 102 HOH HOH . L 11 HOH A 103 103 103 HOH HOH . L 11 HOH A 104 104 104 HOH HOH . L 11 HOH A 105 105 105 HOH HOH . L 11 HOH A 106 106 106 HOH HOH . L 11 HOH A 107 107 107 HOH HOH . L 11 HOH A 108 108 108 HOH HOH . L 11 HOH A 109 109 109 HOH HOH . L 11 HOH A 110 110 110 HOH HOH . L 11 HOH A 111 111 111 HOH HOH . L 11 HOH A 112 112 112 HOH HOH . L 11 HOH A 113 113 113 HOH HOH . L 11 HOH A 114 114 114 HOH HOH . L 11 HOH A 115 115 115 HOH HOH . L 11 HOH A 116 116 116 HOH HOH . L 11 HOH A 117 117 117 HOH HOH . L 11 HOH A 118 118 118 HOH HOH . L 11 HOH A 119 119 119 HOH HOH . L 11 HOH A 120 120 120 HOH HOH . L 11 HOH A 121 121 121 HOH HOH . L 11 HOH A 122 122 122 HOH HOH . L 11 HOH A 123 123 123 HOH HOH . L 11 HOH A 124 124 124 HOH HOH . L 11 HOH A 125 125 125 HOH HOH . L 11 HOH A 126 126 126 HOH HOH . L 11 HOH A 127 127 127 HOH HOH . L 11 HOH A 128 128 128 HOH HOH . L 11 HOH A 129 129 129 HOH HOH . L 11 HOH A 130 130 130 HOH HOH . L 11 HOH A 131 131 131 HOH HOH . L 11 HOH A 132 132 132 HOH HOH . L 11 HOH A 133 133 133 HOH HOH . L 11 HOH A 134 134 134 HOH HOH . L 11 HOH A 135 135 135 HOH HOH . L 11 HOH A 136 136 136 HOH HOH . L 11 HOH A 137 137 137 HOH HOH . L 11 HOH A 138 138 138 HOH HOH . L 11 HOH A 139 139 139 HOH HOH . L 11 HOH A 140 140 140 HOH HOH . L 11 HOH A 141 141 141 HOH HOH . L 11 HOH A 142 142 142 HOH HOH . L 11 HOH A 143 143 143 HOH HOH . L 11 HOH A 144 144 144 HOH HOH . L 11 HOH A 145 145 145 HOH HOH . L 11 HOH A 146 146 146 HOH HOH . L 11 HOH A 147 147 147 HOH HOH . L 11 HOH A 148 148 148 HOH HOH . L 11 HOH A 149 149 149 HOH HOH . L 11 HOH A 150 150 150 HOH HOH . L 11 HOH A 151 151 151 HOH HOH . L 11 HOH A 152 152 152 HOH HOH . L 11 HOH A 153 153 153 HOH HOH . L 11 HOH A 154 154 154 HOH HOH . L 11 HOH A 155 155 155 HOH HOH . L 11 HOH A 156 156 156 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 8 _atom_site.Cartn_x 3.208 _atom_site.Cartn_y 10.401 _atom_site.Cartn_z 7.479 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 26.89 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 804 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #