data_2QD5
#
_model_server_result.job_id            D3XSD1E5lwm7lI6Ldq0oow 
_model_server_result.datetime_utc      '2024-11-19 19:36:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2qd5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":1106}' 
#
_entry.id    2QD5 
#
_exptl.entry_id    2QD5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              60.052 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ACETIC ACID' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2QD5 
_cell.length_a            86.218 
_cell.length_b            92.811 
_cell.length_c            109.808 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2QD5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 I N N 
? 7 J N N 
? 7 Q N N 
#
_chem_comp.formula           'C2 H4 O2' 
_chem_comp.formula_weight    60.052 
_chem_comp.id                ACY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ACETIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O ACY doub 1 n n 
C OXT ACY sing 2 n n 
C CH3 ACY sing 3 n n 
OXT HXT ACY sing 4 n n 
CH3 H1 ACY sing 5 n n 
CH3 H2 ACY sing 6 n n 
CH3 H3 ACY sing 7 n n 
#
_atom_sites.entry_id                     2QD5 
_atom_sites.fract_transf_matrix[1][1]    0.011599 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010775 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009107 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PB A 1 1101 1 PB HPB . 
D 3 FES A 1 501 1 FES FES . 
E 4 CHD A 1 701 1 CHD CHD . 
F 4 CHD A 1 702 2 CHD CHD . 
G 5 PP9 A 1 901 1 PP9 HPB . 
H 6 GOL A 1 601 1 GOL GOL . 
I 7 ACY A 1 801 1 ACY ACY . 
J 7 ACY A 1 803 3 ACY ACY . 
K 2 PB B 1 1102 2 PB HPB . 
L 3 FES B 1 502 2 FES FES . 
M 4 CHD B 1 1103 3 CHD CHD . 
N 4 CHD B 1 1104 4 CHD CHD . 
O 5 PP9 B 1 1105 2 PP9 HPB . 
P 8 OXY B 1 1001 1 OXY OXY . 
Q 7 ACY B 1 1106 2 ACY ACY . 
R 9 HOH A 1 1102 1 HOH HOH . 
R 9 HOH A 2 1103 4 HOH HOH . 
R 9 HOH A 3 1104 5 HOH HOH . 
R 9 HOH A 4 1105 9 HOH HOH . 
R 9 HOH A 5 1106 11 HOH HOH . 
R 9 HOH A 6 1107 12 HOH HOH . 
R 9 HOH A 7 1108 13 HOH HOH . 
R 9 HOH A 8 1109 15 HOH HOH . 
R 9 HOH A 9 1110 17 HOH HOH . 
R 9 HOH A 10 1111 18 HOH HOH . 
R 9 HOH A 11 1112 20 HOH HOH . 
R 9 HOH A 12 1113 22 HOH HOH . 
R 9 HOH A 13 1114 23 HOH HOH . 
R 9 HOH A 14 1115 24 HOH HOH . 
R 9 HOH A 15 1116 26 HOH HOH . 
R 9 HOH A 16 1117 27 HOH HOH . 
R 9 HOH A 17 1118 30 HOH HOH . 
R 9 HOH A 18 1119 32 HOH HOH . 
R 9 HOH A 19 1120 40 HOH HOH . 
R 9 HOH A 20 1121 46 HOH HOH . 
R 9 HOH A 21 1122 49 HOH HOH . 
R 9 HOH A 22 1123 51 HOH HOH . 
R 9 HOH A 23 1124 54 HOH HOH . 
R 9 HOH A 24 1125 55 HOH HOH . 
R 9 HOH A 25 1126 56 HOH HOH . 
R 9 HOH A 26 1127 60 HOH HOH . 
R 9 HOH A 27 1128 63 HOH HOH . 
R 9 HOH A 28 1129 65 HOH HOH . 
R 9 HOH A 29 1130 66 HOH HOH . 
R 9 HOH A 30 1131 67 HOH HOH . 
R 9 HOH A 31 1132 69 HOH HOH . 
R 9 HOH A 32 1133 74 HOH HOH . 
R 9 HOH A 33 1134 75 HOH HOH . 
R 9 HOH A 34 1135 78 HOH HOH . 
R 9 HOH A 35 1136 79 HOH HOH . 
R 9 HOH A 36 1137 80 HOH HOH . 
R 9 HOH A 37 1138 81 HOH HOH . 
R 9 HOH A 38 1139 83 HOH HOH . 
R 9 HOH A 39 1140 85 HOH HOH . 
R 9 HOH A 40 1141 88 HOH HOH . 
R 9 HOH A 41 1142 89 HOH HOH . 
R 9 HOH A 42 1143 91 HOH HOH . 
R 9 HOH A 43 1144 95 HOH HOH . 
R 9 HOH A 44 1145 96 HOH HOH . 
R 9 HOH A 45 1146 97 HOH HOH . 
R 9 HOH A 46 1147 100 HOH HOH . 
R 9 HOH A 47 1148 103 HOH HOH . 
R 9 HOH A 48 1149 105 HOH HOH . 
R 9 HOH A 49 1150 107 HOH HOH . 
R 9 HOH A 50 1151 108 HOH HOH . 
R 9 HOH A 51 1152 112 HOH HOH . 
R 9 HOH A 52 1153 113 HOH HOH . 
R 9 HOH A 53 1154 114 HOH HOH . 
R 9 HOH A 54 1155 115 HOH HOH . 
R 9 HOH A 55 1156 117 HOH HOH . 
R 9 HOH A 56 1157 118 HOH HOH . 
R 9 HOH A 57 1158 119 HOH HOH . 
R 9 HOH A 58 1159 120 HOH HOH . 
R 9 HOH A 59 1160 121 HOH HOH . 
R 9 HOH A 60 1161 122 HOH HOH . 
R 9 HOH A 61 1162 123 HOH HOH . 
R 9 HOH A 62 1163 124 HOH HOH . 
R 9 HOH A 63 1164 127 HOH HOH . 
R 9 HOH A 64 1165 129 HOH HOH . 
R 9 HOH A 65 1166 131 HOH HOH . 
R 9 HOH A 66 1167 132 HOH HOH . 
R 9 HOH A 67 1168 134 HOH HOH . 
R 9 HOH A 68 1169 135 HOH HOH . 
R 9 HOH A 69 1170 136 HOH HOH . 
R 9 HOH A 70 1171 138 HOH HOH . 
R 9 HOH A 71 1172 139 HOH HOH . 
R 9 HOH A 72 1173 141 HOH HOH . 
R 9 HOH A 73 1174 142 HOH HOH . 
R 9 HOH A 74 1175 143 HOH HOH . 
R 9 HOH A 75 1176 147 HOH HOH . 
R 9 HOH A 76 1177 148 HOH HOH . 
R 9 HOH A 77 1178 152 HOH HOH . 
R 9 HOH A 78 1179 153 HOH HOH . 
R 9 HOH A 79 1180 154 HOH HOH . 
R 9 HOH A 80 1181 155 HOH HOH . 
R 9 HOH A 81 1182 156 HOH HOH . 
R 9 HOH A 82 1183 157 HOH HOH . 
R 9 HOH A 83 1184 158 HOH HOH . 
R 9 HOH A 84 1185 159 HOH HOH . 
R 9 HOH A 85 1186 160 HOH HOH . 
R 9 HOH A 86 1187 161 HOH HOH . 
R 9 HOH A 87 1188 163 HOH HOH . 
R 9 HOH A 88 1189 164 HOH HOH . 
R 9 HOH A 89 1190 166 HOH HOH . 
R 9 HOH A 90 1191 168 HOH HOH . 
R 9 HOH A 91 1192 169 HOH HOH . 
R 9 HOH A 92 1193 170 HOH HOH . 
R 9 HOH A 93 1194 171 HOH HOH . 
R 9 HOH A 94 1195 175 HOH HOH . 
S 9 HOH B 1 1107 2 HOH HOH . 
S 9 HOH B 2 1108 3 HOH HOH . 
S 9 HOH B 3 1109 6 HOH HOH . 
S 9 HOH B 4 1110 7 HOH HOH . 
S 9 HOH B 5 1111 8 HOH HOH . 
S 9 HOH B 6 1112 10 HOH HOH . 
S 9 HOH B 7 1113 14 HOH HOH . 
S 9 HOH B 8 1114 16 HOH HOH . 
S 9 HOH B 9 1115 19 HOH HOH . 
S 9 HOH B 10 1116 21 HOH HOH . 
S 9 HOH B 11 1117 25 HOH HOH . 
S 9 HOH B 12 1118 28 HOH HOH . 
S 9 HOH B 13 1119 29 HOH HOH . 
S 9 HOH B 14 1120 31 HOH HOH . 
S 9 HOH B 15 1121 33 HOH HOH . 
S 9 HOH B 16 1122 34 HOH HOH . 
S 9 HOH B 17 1123 35 HOH HOH . 
S 9 HOH B 18 1124 36 HOH HOH . 
S 9 HOH B 19 1125 37 HOH HOH . 
S 9 HOH B 20 1126 38 HOH HOH . 
S 9 HOH B 21 1127 39 HOH HOH . 
S 9 HOH B 22 1128 41 HOH HOH . 
S 9 HOH B 23 1129 42 HOH HOH . 
S 9 HOH B 24 1130 43 HOH HOH . 
S 9 HOH B 25 1131 44 HOH HOH . 
S 9 HOH B 26 1132 45 HOH HOH . 
S 9 HOH B 27 1133 47 HOH HOH . 
S 9 HOH B 28 1134 48 HOH HOH . 
S 9 HOH B 29 1135 50 HOH HOH . 
S 9 HOH B 30 1136 52 HOH HOH . 
S 9 HOH B 31 1137 53 HOH HOH . 
S 9 HOH B 32 1138 57 HOH HOH . 
S 9 HOH B 33 1139 58 HOH HOH . 
S 9 HOH B 34 1140 59 HOH HOH . 
S 9 HOH B 35 1141 61 HOH HOH . 
S 9 HOH B 36 1142 62 HOH HOH . 
S 9 HOH B 37 1143 64 HOH HOH . 
S 9 HOH B 38 1144 68 HOH HOH . 
S 9 HOH B 39 1145 70 HOH HOH . 
S 9 HOH B 40 1146 71 HOH HOH . 
S 9 HOH B 41 1147 72 HOH HOH . 
S 9 HOH B 42 1148 73 HOH HOH . 
S 9 HOH B 43 1149 76 HOH HOH . 
S 9 HOH B 44 1150 77 HOH HOH . 
S 9 HOH B 45 1151 82 HOH HOH . 
S 9 HOH B 46 1152 84 HOH HOH . 
S 9 HOH B 47 1153 86 HOH HOH . 
S 9 HOH B 48 1154 87 HOH HOH . 
S 9 HOH B 49 1155 90 HOH HOH . 
S 9 HOH B 50 1156 92 HOH HOH . 
S 9 HOH B 51 1157 93 HOH HOH . 
S 9 HOH B 52 1158 94 HOH HOH . 
S 9 HOH B 53 1159 98 HOH HOH . 
S 9 HOH B 54 1160 99 HOH HOH . 
S 9 HOH B 55 1161 101 HOH HOH . 
S 9 HOH B 56 1162 102 HOH HOH . 
S 9 HOH B 57 1163 104 HOH HOH . 
S 9 HOH B 58 1164 106 HOH HOH . 
S 9 HOH B 59 1165 109 HOH HOH . 
S 9 HOH B 60 1166 110 HOH HOH . 
S 9 HOH B 61 1167 111 HOH HOH . 
S 9 HOH B 62 1168 116 HOH HOH . 
S 9 HOH B 63 1169 125 HOH HOH . 
S 9 HOH B 64 1170 126 HOH HOH . 
S 9 HOH B 65 1171 128 HOH HOH . 
S 9 HOH B 66 1172 130 HOH HOH . 
S 9 HOH B 67 1173 133 HOH HOH . 
S 9 HOH B 68 1174 137 HOH HOH . 
S 9 HOH B 69 1175 140 HOH HOH . 
S 9 HOH B 70 1176 144 HOH HOH . 
S 9 HOH B 71 1177 145 HOH HOH . 
S 9 HOH B 72 1178 146 HOH HOH . 
S 9 HOH B 73 1179 149 HOH HOH . 
S 9 HOH B 74 1180 150 HOH HOH . 
S 9 HOH B 75 1181 151 HOH HOH . 
S 9 HOH B 76 1182 162 HOH HOH . 
S 9 HOH B 77 1183 165 HOH HOH . 
S 9 HOH B 78 1184 167 HOH HOH . 
S 9 HOH B 79 1185 172 HOH HOH . 
S 9 HOH B 80 1186 173 HOH HOH . 
S 9 HOH B 81 1187 174 HOH HOH . 
S 9 HOH B 82 1188 176 HOH HOH . 
S 9 HOH B 83 1189 177 HOH HOH . 
S 9 HOH B 84 1190 178 HOH HOH . 
S 9 HOH B 85 1191 179 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C ACY . . . Q 7 33.79 32.464 18.463 0.75 42.82 ? C ACY 1106 B 1 
HETATM 2 O O ACY . . . Q 7 34.811 31.949 18.853 0.75 42.02 ? O ACY 1106 B 1 
HETATM 3 O OXT ACY . . . Q 7 33.823 33.69 17.917 0.75 44.52 ? OXT ACY 1106 B 1 
HETATM 4 C CH3 ACY . . . Q 7 32.48 31.73 18.588 0.75 43.22 ? CH3 ACY 1106 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           4 
#