data_2QDB # _model_server_result.job_id gwQIjOu6fqcWD6H5gkHi0A _model_server_result.datetime_utc '2024-10-11 10:23:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qdb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":250}' # _entry.id 2QDB # _exptl.entry_id 2QDB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QDB _cell.length_a 48.668 _cell.length_b 48.668 _cell.length_c 63.277 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QDB _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 247 n n P O2 PO4 sing 248 n n P O3 PO4 sing 249 n n P O4 PO4 sing 250 n n # _atom_sites.entry_id 2QDB _atom_sites.fract_transf_matrix[1][1] 0.020547 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020547 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015804 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 250 250 PO4 PO4 . C 3 HOH A 1 251 1 HOH WAT . C 3 HOH A 2 252 2 HOH WAT . C 3 HOH A 3 253 3 HOH WAT . C 3 HOH A 4 254 4 HOH WAT . C 3 HOH A 5 255 5 HOH WAT . C 3 HOH A 6 256 6 HOH WAT . C 3 HOH A 7 257 7 HOH WAT . C 3 HOH A 8 258 8 HOH WAT . C 3 HOH A 9 259 9 HOH WAT . C 3 HOH A 10 260 10 HOH WAT . C 3 HOH A 11 261 11 HOH WAT . C 3 HOH A 12 262 12 HOH WAT . C 3 HOH A 13 263 13 HOH WAT . C 3 HOH A 14 264 14 HOH WAT . C 3 HOH A 15 265 15 HOH WAT . C 3 HOH A 16 266 16 HOH WAT . C 3 HOH A 17 267 17 HOH WAT . C 3 HOH A 18 268 18 HOH WAT . C 3 HOH A 19 269 19 HOH WAT . C 3 HOH A 20 270 20 HOH WAT . C 3 HOH A 21 271 21 HOH WAT . C 3 HOH A 22 272 22 HOH WAT . C 3 HOH A 23 273 23 HOH WAT . C 3 HOH A 24 274 24 HOH WAT . C 3 HOH A 25 275 25 HOH WAT . C 3 HOH A 26 276 26 HOH WAT . C 3 HOH A 27 277 27 HOH WAT . C 3 HOH A 28 278 28 HOH WAT . C 3 HOH A 29 279 29 HOH WAT . C 3 HOH A 30 280 30 HOH WAT . C 3 HOH A 31 281 31 HOH WAT . C 3 HOH A 32 282 32 HOH WAT . C 3 HOH A 33 283 33 HOH WAT . C 3 HOH A 34 284 34 HOH WAT . C 3 HOH A 35 285 35 HOH WAT . C 3 HOH A 36 286 36 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 7.67 -13.259 -21.279 1 73.52 ? P PO4 250 A 1 HETATM 2 O O1 PO4 . . . B 2 8.961 -13.864 -20.852 1 71.14 ? O1 PO4 250 A 1 HETATM 3 O O2 PO4 . . . B 2 7.747 -11.78 -21.131 1 73.5 ? O2 PO4 250 A 1 HETATM 4 O O3 PO4 . . . B 2 7.405 -13.603 -22.703 1 72.04 ? O3 PO4 250 A 1 HETATM 5 O O4 PO4 . . . B 2 6.566 -13.785 -20.429 1 72.48 ? O4 PO4 250 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #