data_2QER # _model_server_result.job_id '_YtQLRqK0z2yin68gt5Ndw' _model_server_result.datetime_utc '2024-11-14 16:49:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qer # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":190}' # _entry.id 2QER # _exptl.entry_id 2QER _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QER _cell.length_a 69.047 _cell.length_b 69.047 _cell.length_c 124.622 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QER _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id C _struct_conn.ptnr1_label_comp_id ALA _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id ALA _struct_conn.ptnr1_auth_seq_id 187 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id PRO _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id PRO _struct_conn.ptnr2_auth_seq_id 188 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.355 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2QER _atom_sites.fract_transf_matrix[1][1] 0.014483 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014483 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008024 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 186 1 SO4 SO4 . C 3 ALA A 1 187 1 ALA ALA . D 4 PRO A 1 188 2 PRO PRO . E 5 GOL A 1 189 1 GOL GOL . F 5 GOL A 1 190 1 GOL GOL . G 5 GOL A 1 191 1 GOL GOL . H 6 HOH A 1 192 1 HOH HOH . H 6 HOH A 2 193 2 HOH HOH . H 6 HOH A 3 194 3 HOH HOH . H 6 HOH A 4 195 4 HOH HOH . H 6 HOH A 5 196 5 HOH HOH . H 6 HOH A 6 197 6 HOH HOH . H 6 HOH A 7 198 7 HOH HOH . H 6 HOH A 8 199 8 HOH HOH . H 6 HOH A 9 200 9 HOH HOH . H 6 HOH A 10 201 11 HOH HOH . H 6 HOH A 11 202 12 HOH HOH . H 6 HOH A 12 203 14 HOH HOH . H 6 HOH A 13 204 17 HOH HOH . H 6 HOH A 14 205 18 HOH HOH . H 6 HOH A 15 206 19 HOH HOH . H 6 HOH A 16 207 20 HOH HOH . H 6 HOH A 17 208 21 HOH HOH . H 6 HOH A 18 209 22 HOH HOH . H 6 HOH A 19 210 23 HOH HOH . H 6 HOH A 20 211 24 HOH HOH . H 6 HOH A 21 212 25 HOH HOH . H 6 HOH A 22 213 26 HOH HOH . H 6 HOH A 23 214 27 HOH HOH . H 6 HOH A 24 215 28 HOH HOH . H 6 HOH A 25 216 30 HOH HOH . H 6 HOH A 26 217 32 HOH HOH . H 6 HOH A 27 218 36 HOH HOH . H 6 HOH A 28 219 37 HOH HOH . H 6 HOH A 29 220 39 HOH HOH . H 6 HOH A 30 221 40 HOH HOH . H 6 HOH A 31 222 42 HOH HOH . H 6 HOH A 32 223 43 HOH HOH . H 6 HOH A 33 224 44 HOH HOH . H 6 HOH A 34 225 45 HOH HOH . H 6 HOH A 35 226 46 HOH HOH . H 6 HOH A 36 227 49 HOH HOH . H 6 HOH A 37 228 50 HOH HOH . H 6 HOH A 38 229 51 HOH HOH . H 6 HOH A 39 230 52 HOH HOH . H 6 HOH A 40 231 54 HOH HOH . H 6 HOH A 41 232 55 HOH HOH . H 6 HOH A 42 233 57 HOH HOH . H 6 HOH A 43 234 61 HOH HOH . H 6 HOH A 44 235 62 HOH HOH . H 6 HOH A 45 236 63 HOH HOH . H 6 HOH A 46 237 64 HOH HOH . H 6 HOH A 47 238 65 HOH HOH . H 6 HOH A 48 239 70 HOH HOH . H 6 HOH A 49 240 1 HOH HOH . H 6 HOH A 50 241 2 HOH HOH . H 6 HOH A 51 242 3 HOH HOH . H 6 HOH A 52 243 4 HOH HOH . H 6 HOH A 53 244 5 HOH HOH . H 6 HOH A 54 245 6 HOH HOH . H 6 HOH A 55 246 7 HOH HOH . H 6 HOH A 56 247 9 HOH HOH . H 6 HOH A 57 248 10 HOH HOH . H 6 HOH A 58 249 11 HOH HOH . H 6 HOH A 59 250 12 HOH HOH . H 6 HOH A 60 251 13 HOH HOH . H 6 HOH A 61 252 14 HOH HOH . H 6 HOH A 62 253 15 HOH HOH . H 6 HOH A 63 254 16 HOH HOH . H 6 HOH A 64 255 17 HOH HOH . H 6 HOH A 65 256 18 HOH HOH . H 6 HOH A 66 257 19 HOH HOH . H 6 HOH A 67 258 20 HOH HOH . H 6 HOH A 68 259 21 HOH HOH . H 6 HOH A 69 260 22 HOH HOH . H 6 HOH A 70 261 23 HOH HOH . H 6 HOH A 71 262 24 HOH HOH . H 6 HOH A 72 263 25 HOH HOH . H 6 HOH A 73 264 26 HOH HOH . H 6 HOH A 74 265 27 HOH HOH . H 6 HOH A 75 266 28 HOH HOH . H 6 HOH A 76 267 29 HOH HOH . H 6 HOH A 77 268 30 HOH HOH . H 6 HOH A 78 269 31 HOH HOH . H 6 HOH A 79 270 32 HOH HOH . H 6 HOH A 80 271 33 HOH HOH . H 6 HOH A 81 272 34 HOH HOH . H 6 HOH A 82 273 35 HOH HOH . H 6 HOH A 83 274 36 HOH HOH . H 6 HOH A 84 275 37 HOH HOH . H 6 HOH A 85 276 38 HOH HOH . H 6 HOH A 86 277 39 HOH HOH . H 6 HOH A 87 278 40 HOH HOH . H 6 HOH A 88 279 41 HOH HOH . H 6 HOH A 89 280 43 HOH HOH . H 6 HOH A 90 281 44 HOH HOH . H 6 HOH A 91 282 45 HOH HOH . H 6 HOH A 92 283 46 HOH HOH . H 6 HOH A 93 284 47 HOH HOH . H 6 HOH A 94 285 50 HOH HOH . H 6 HOH A 95 286 51 HOH HOH . H 6 HOH A 96 287 52 HOH HOH . H 6 HOH A 97 288 53 HOH HOH . H 6 HOH A 98 289 54 HOH HOH . H 6 HOH A 99 290 57 HOH HOH . H 6 HOH A 100 291 59 HOH HOH . H 6 HOH A 101 292 61 HOH HOH . H 6 HOH A 102 293 62 HOH HOH . H 6 HOH A 103 294 63 HOH HOH . H 6 HOH A 104 295 64 HOH HOH . H 6 HOH A 105 296 65 HOH HOH . H 6 HOH A 106 297 66 HOH HOH . H 6 HOH A 107 298 67 HOH HOH . H 6 HOH A 108 299 69 HOH HOH . H 6 HOH A 109 300 70 HOH HOH . H 6 HOH A 110 301 72 HOH HOH . H 6 HOH A 111 302 73 HOH HOH . H 6 HOH A 112 303 74 HOH HOH . H 6 HOH A 113 304 3 HOH HOH . H 6 HOH A 114 305 6 HOH HOH . H 6 HOH A 115 306 8 HOH HOH . H 6 HOH A 116 307 9 HOH HOH . H 6 HOH A 117 308 10 HOH HOH . H 6 HOH A 118 309 4 HOH HOH . H 6 HOH A 119 310 14 HOH HOH . H 6 HOH A 120 311 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 5 -30.251 19.395 -24.567 1 96.77 ? C1 GOL 190 A 1 HETATM 2 O O1 GOL . . . F 5 -29.877 18.093 -24.18 1 96.76 ? O1 GOL 190 A 1 HETATM 3 C C2 GOL . . . F 5 -29.445 20.42 -23.78 1 97.05 ? C2 GOL 190 A 1 HETATM 4 O O2 GOL . . . F 5 -30.102 21.67 -23.815 1 96.83 ? O2 GOL 190 A 1 HETATM 5 C C3 GOL . . . F 5 -28.021 20.521 -24.326 1 96.93 ? C3 GOL 190 A 1 HETATM 6 O O3 GOL . . . F 5 -27.938 21.509 -25.331 1 97.06 ? O3 GOL 190 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #