data_2QFD # _model_server_result.job_id T2tZXlfdzGluWNlSH5gTbQ _model_server_result.datetime_utc '2024-11-09 02:26:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qfd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":1007}' # _entry.id 2QFD # _exptl.entry_id 2QFD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 200.59 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MERCURY (II) ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.07 _cell.angle_gamma 90 _cell.entry_id 2QFD _cell.length_a 97.15 _cell.length_b 76.54 _cell.length_c 137.9 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QFD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 PISA monomeric 1 author_and_software_defined_assembly 6 PISA monomeric 1 author_and_software_defined_assembly 7 PISA monomeric 1 author_and_software_defined_assembly 8 PISA monomeric 1 author_and_software_defined_assembly 9 PISA monomeric 1 author_and_software_defined_assembly 10 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,K,U 1 1 B,L,V 2 1 C,M,W 3 1 D,N,X 4 1 E,O,Y 5 1 F,P,Z 6 1 G,Q,AA 7 1 H,R,BA 8 1 I,S 9 1 J,T 10 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 49 _struct_conn.ptnr1_auth_asym_id C _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 829 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 49 _struct_conn.ptnr2_auth_asym_id E _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 829 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.947 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Hg 2' _chem_comp.formula_weight 200.59 _chem_comp.id HG _chem_comp.mon_nstd_flag . _chem_comp.name 'MERCURY (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2QFD _atom_sites.fract_transf_matrix[1][1] 0.010293 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000552 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013065 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007262 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 2 HG A 1 1001 1 HG HG2 . L 2 HG B 1 1002 2 HG HG2 . M 2 HG C 1 1003 3 HG HG2 . N 2 HG D 1 1004 4 HG HG2 . O 2 HG E 1 1005 5 HG HG2 . P 2 HG F 1 1006 6 HG HG2 . Q 2 HG G 1 1007 7 HG HG2 . R 2 HG H 1 1008 8 HG HG2 . S 2 HG I 1 1009 9 HG HG2 . T 2 HG J 1 1010 10 HG HG2 . U 3 HOH A 1 4 4 HOH HOH . U 3 HOH A 2 6 6 HOH HOH . U 3 HOH A 3 9 9 HOH HOH . U 3 HOH A 4 15 15 HOH HOH . U 3 HOH A 5 17 17 HOH HOH . U 3 HOH A 6 19 19 HOH HOH . U 3 HOH A 7 20 20 HOH HOH . U 3 HOH A 8 32 32 HOH HOH . U 3 HOH A 9 33 33 HOH HOH . U 3 HOH A 10 34 34 HOH HOH . U 3 HOH A 11 35 35 HOH HOH . U 3 HOH A 12 36 36 HOH HOH . U 3 HOH A 13 37 37 HOH HOH . U 3 HOH A 14 40 40 HOH HOH . U 3 HOH A 15 41 41 HOH HOH . U 3 HOH A 16 42 42 HOH HOH . U 3 HOH A 17 48 48 HOH HOH . U 3 HOH A 18 60 60 HOH HOH . U 3 HOH A 19 61 61 HOH HOH . U 3 HOH A 20 63 63 HOH HOH . U 3 HOH A 21 65 65 HOH HOH . U 3 HOH A 22 66 66 HOH HOH . U 3 HOH A 23 67 67 HOH HOH . U 3 HOH A 24 68 68 HOH HOH . U 3 HOH A 25 75 75 HOH HOH . U 3 HOH A 26 76 76 HOH HOH . U 3 HOH A 27 77 77 HOH HOH . V 3 HOH B 1 18 18 HOH HOH . V 3 HOH B 2 22 22 HOH HOH . V 3 HOH B 3 23 23 HOH HOH . V 3 HOH B 4 24 24 HOH HOH . V 3 HOH B 5 25 25 HOH HOH . V 3 HOH B 6 26 26 HOH HOH . V 3 HOH B 7 28 28 HOH HOH . V 3 HOH B 8 44 44 HOH HOH . V 3 HOH B 9 46 46 HOH HOH . V 3 HOH B 10 47 47 HOH HOH . V 3 HOH B 11 49 49 HOH HOH . V 3 HOH B 12 50 50 HOH HOH . V 3 HOH B 13 51 51 HOH HOH . V 3 HOH B 14 53 53 HOH HOH . V 3 HOH B 15 54 54 HOH HOH . V 3 HOH B 16 55 55 HOH HOH . V 3 HOH B 17 56 56 HOH HOH . V 3 HOH B 18 69 69 HOH HOH . V 3 HOH B 19 70 70 HOH HOH . V 3 HOH B 20 71 71 HOH HOH . V 3 HOH B 21 72 72 HOH HOH . V 3 HOH B 22 73 73 HOH HOH . V 3 HOH B 23 74 74 HOH HOH . V 3 HOH B 24 78 78 HOH HOH . V 3 HOH B 25 101 101 HOH HOH . W 3 HOH C 1 57 57 HOH HOH . W 3 HOH C 2 58 58 HOH HOH . W 3 HOH C 3 59 59 HOH HOH . W 3 HOH C 4 79 79 HOH HOH . W 3 HOH C 5 80 80 HOH HOH . W 3 HOH C 6 81 81 HOH HOH . W 3 HOH C 7 84 84 HOH HOH . W 3 HOH C 8 85 85 HOH HOH . W 3 HOH C 9 91 91 HOH HOH . W 3 HOH C 10 92 92 HOH HOH . W 3 HOH C 11 95 95 HOH HOH . W 3 HOH C 12 120 120 HOH HOH . X 3 HOH D 1 3 3 HOH HOH . X 3 HOH D 2 10 10 HOH HOH . X 3 HOH D 3 29 29 HOH HOH . X 3 HOH D 4 96 96 HOH HOH . X 3 HOH D 5 97 97 HOH HOH . X 3 HOH D 6 98 98 HOH HOH . X 3 HOH D 7 99 99 HOH HOH . X 3 HOH D 8 100 100 HOH HOH . X 3 HOH D 9 102 102 HOH HOH . X 3 HOH D 10 103 103 HOH HOH . X 3 HOH D 11 104 104 HOH HOH . X 3 HOH D 12 105 105 HOH HOH . X 3 HOH D 13 106 106 HOH HOH . X 3 HOH D 14 123 123 HOH HOH . X 3 HOH D 15 124 124 HOH HOH . Y 3 HOH E 1 30 30 HOH HOH . Y 3 HOH E 2 62 62 HOH HOH . Y 3 HOH E 3 82 82 HOH HOH . Y 3 HOH E 4 87 87 HOH HOH . Y 3 HOH E 5 89 89 HOH HOH . Y 3 HOH E 6 90 90 HOH HOH . Y 3 HOH E 7 107 107 HOH HOH . Y 3 HOH E 8 108 108 HOH HOH . Z 3 HOH F 1 109 109 HOH HOH . Z 3 HOH F 2 110 110 HOH HOH . Z 3 HOH F 3 111 111 HOH HOH . Z 3 HOH F 4 112 112 HOH HOH . AA 3 HOH G 1 86 86 HOH HOH . AA 3 HOH G 2 88 88 HOH HOH . AA 3 HOH G 3 94 94 HOH HOH . AA 3 HOH G 4 114 114 HOH HOH . AA 3 HOH G 5 115 115 HOH HOH . AA 3 HOH G 6 116 116 HOH HOH . AA 3 HOH G 7 117 117 HOH HOH . AA 3 HOH G 8 118 118 HOH HOH . BA 3 HOH H 1 119 119 HOH HOH . BA 3 HOH H 2 121 121 HOH HOH . BA 3 HOH H 3 122 122 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol HG _atom_site.label_atom_id HG _atom_site.label_comp_id HG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id Q _atom_site.label_entity_id 2 _atom_site.Cartn_x -29.075 _atom_site.Cartn_y -1.525 _atom_site.Cartn_z 38.644 _atom_site.occupancy 0.42 _atom_site.B_iso_or_equiv 51.11 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id HG _atom_site.auth_comp_id HG _atom_site.auth_seq_id 1007 _atom_site.auth_asym_id G _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #