data_2QFN # _model_server_result.job_id totehIfcw4WwmBTQRHnuoA _model_server_result.datetime_utc '2024-11-28 05:29:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qfn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":187}' # _entry.id 2QFN # _exptl.entry_id 2QFN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 31.999 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OXYGEN MOLECULE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QFN _cell.length_a 57.938 _cell.length_b 67.091 _cell.length_c 68.402 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QFN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 90 A HIS 89 1_555 E FE HEM . A HEM 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc2 E FE HEM . A HEM 139 1_555 F O1 OXY . A OXY 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc3 B NE2 HIS 90 B HIS 89 1_555 J FE HEM . B HEM 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc4 J FE HEM . B HEM 139 1_555 K O1 OXY . B OXY 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? # _chem_comp.formula O2 _chem_comp.formula_weight 31.999 _chem_comp.id OXY _chem_comp.mon_nstd_flag . _chem_comp.name 'OXYGEN MOLECULE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 O1 _chem_comp_bond.atom_id_2 O2 _chem_comp_bond.comp_id OXY _chem_comp_bond.value_order doub _chem_comp_bond.pdbx_ordinal 323 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 2QFN _atom_sites.fract_transf_matrix[1][1] 0.01726 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014905 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014619 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NH4 A 1 192 192 NH4 NH4 . D 3 SO4 A 1 197 197 SO4 SO4 . E 4 HEM A 1 139 139 HEM HEM . F 5 OXY A 1 186 186 OXY OXY . G 3 SO4 B 1 195 195 SO4 SO4 . H 3 SO4 B 1 196 196 SO4 SO4 . I 2 NH4 B 1 191 191 NH4 NH4 . J 4 HEM B 1 139 139 HEM HEM . K 5 OXY B 1 187 187 OXY OXY . L 6 HOH A 1 198 504 HOH HOH . L 6 HOH A 2 199 511 HOH HOH . L 6 HOH A 3 200 512 HOH HOH . L 6 HOH A 4 201 514 HOH HOH . L 6 HOH A 5 202 516 HOH HOH . L 6 HOH A 6 203 520 HOH HOH . L 6 HOH A 7 204 521 HOH HOH . L 6 HOH A 8 205 526 HOH HOH . L 6 HOH A 9 206 527 HOH HOH . L 6 HOH A 10 207 529 HOH HOH . L 6 HOH A 11 208 530 HOH HOH . L 6 HOH A 12 209 531 HOH HOH . L 6 HOH A 13 210 532 HOH HOH . L 6 HOH A 14 211 533 HOH HOH . L 6 HOH A 15 212 540 HOH HOH . L 6 HOH A 16 213 543 HOH HOH . L 6 HOH A 17 214 545 HOH HOH . L 6 HOH A 18 215 548 HOH HOH . L 6 HOH A 19 216 549 HOH HOH . L 6 HOH A 20 217 553 HOH HOH . L 6 HOH A 21 218 554 HOH HOH . L 6 HOH A 22 219 560 HOH HOH . L 6 HOH A 23 220 563 HOH HOH . L 6 HOH A 24 221 566 HOH HOH . L 6 HOH A 25 222 574 HOH HOH . L 6 HOH A 26 223 578 HOH HOH . L 6 HOH A 27 224 579 HOH HOH . L 6 HOH A 28 225 583 HOH HOH . L 6 HOH A 29 226 584 HOH HOH . L 6 HOH A 30 227 588 HOH HOH . L 6 HOH A 31 228 589 HOH HOH . L 6 HOH A 32 229 590 HOH HOH . L 6 HOH A 33 230 591 HOH HOH . L 6 HOH A 34 231 592 HOH HOH . L 6 HOH A 35 232 596 HOH HOH . L 6 HOH A 36 233 597 HOH HOH . L 6 HOH A 37 234 600 HOH HOH . L 6 HOH A 38 235 605 HOH HOH . L 6 HOH A 39 236 607 HOH HOH . L 6 HOH A 40 237 609 HOH HOH . L 6 HOH A 41 238 611 HOH HOH . L 6 HOH A 42 239 618 HOH HOH . L 6 HOH A 43 240 622 HOH HOH . L 6 HOH A 44 241 635 HOH HOH . L 6 HOH A 45 242 644 HOH HOH . L 6 HOH A 46 243 647 HOH HOH . L 6 HOH A 47 244 648 HOH HOH . L 6 HOH A 48 245 649 HOH HOH . L 6 HOH A 49 246 650 HOH HOH . L 6 HOH A 50 247 651 HOH HOH . L 6 HOH A 51 248 652 HOH HOH . L 6 HOH A 52 249 654 HOH HOH . L 6 HOH A 53 250 656 HOH HOH . L 6 HOH A 54 251 658 HOH HOH . L 6 HOH A 55 252 659 HOH HOH . L 6 HOH A 56 253 663 HOH HOH . L 6 HOH A 57 254 668 HOH HOH . L 6 HOH A 58 255 669 HOH HOH . L 6 HOH A 59 256 670 HOH HOH . L 6 HOH A 60 257 671 HOH HOH . L 6 HOH A 61 258 672 HOH HOH . L 6 HOH A 62 259 674 HOH HOH . L 6 HOH A 63 260 680 HOH HOH . L 6 HOH A 64 261 681 HOH HOH . L 6 HOH A 65 262 683 HOH HOH . L 6 HOH A 66 263 684 HOH HOH . L 6 HOH A 67 264 691 HOH HOH . L 6 HOH A 68 265 692 HOH HOH . L 6 HOH A 69 266 694 HOH HOH . L 6 HOH A 70 267 699 HOH HOH . L 6 HOH A 71 268 701 HOH HOH . L 6 HOH A 72 269 702 HOH HOH . L 6 HOH A 73 270 703 HOH HOH . L 6 HOH A 74 271 705 HOH HOH . L 6 HOH A 75 272 706 HOH HOH . L 6 HOH A 76 273 707 HOH HOH . L 6 HOH A 77 274 709 HOH HOH . L 6 HOH A 78 275 710 HOH HOH . L 6 HOH A 79 276 711 HOH HOH . L 6 HOH A 80 277 712 HOH HOH . L 6 HOH A 81 278 724 HOH HOH . L 6 HOH A 82 279 725 HOH HOH . L 6 HOH A 83 280 726 HOH HOH . L 6 HOH A 84 281 728 HOH HOH . L 6 HOH A 85 282 731 HOH HOH . L 6 HOH A 86 283 741 HOH HOH . L 6 HOH A 87 284 748 HOH HOH . L 6 HOH A 88 285 749 HOH HOH . L 6 HOH A 89 286 750 HOH HOH . L 6 HOH A 90 287 751 HOH HOH . L 6 HOH A 91 288 756 HOH HOH . L 6 HOH A 92 289 757 HOH HOH . L 6 HOH A 93 290 759 HOH HOH . L 6 HOH A 94 291 760 HOH HOH . L 6 HOH A 95 292 761 HOH HOH . L 6 HOH A 96 293 764 HOH HOH . L 6 HOH A 97 294 766 HOH HOH . L 6 HOH A 98 295 767 HOH HOH . L 6 HOH A 99 296 768 HOH HOH . L 6 HOH A 100 297 769 HOH HOH . L 6 HOH A 101 298 770 HOH HOH . L 6 HOH A 102 299 771 HOH HOH . L 6 HOH A 103 300 772 HOH HOH . L 6 HOH A 104 301 773 HOH HOH . L 6 HOH A 105 302 774 HOH HOH . L 6 HOH A 106 303 799 HOH HOH . L 6 HOH A 107 304 804 HOH HOH . L 6 HOH A 108 305 806 HOH HOH . L 6 HOH A 109 306 807 HOH HOH . L 6 HOH A 110 307 808 HOH HOH . L 6 HOH A 111 308 809 HOH HOH . L 6 HOH A 112 309 810 HOH HOH . L 6 HOH A 113 310 818 HOH HOH . L 6 HOH A 114 311 819 HOH HOH . L 6 HOH A 115 312 821 HOH HOH . L 6 HOH A 116 313 822 HOH HOH . L 6 HOH A 117 314 823 HOH HOH . L 6 HOH A 118 315 824 HOH HOH . L 6 HOH A 119 316 832 HOH HOH . L 6 HOH A 120 317 834 HOH HOH . L 6 HOH A 121 318 835 HOH HOH . L 6 HOH A 122 319 842 HOH HOH . L 6 HOH A 123 320 843 HOH HOH . L 6 HOH A 124 321 844 HOH HOH . L 6 HOH A 125 322 845 HOH HOH . L 6 HOH A 126 323 848 HOH HOH . L 6 HOH A 127 324 849 HOH HOH . L 6 HOH A 128 325 860 HOH HOH . L 6 HOH A 129 326 861 HOH HOH . L 6 HOH A 130 327 866 HOH HOH . L 6 HOH A 131 328 867 HOH HOH . L 6 HOH A 132 329 877 HOH HOH . L 6 HOH A 133 330 879 HOH HOH . L 6 HOH A 134 331 881 HOH HOH . L 6 HOH A 135 332 883 HOH HOH . L 6 HOH A 136 333 886 HOH HOH . L 6 HOH A 137 334 887 HOH HOH . L 6 HOH A 138 335 889 HOH HOH . L 6 HOH A 139 336 894 HOH HOH . L 6 HOH A 140 337 897 HOH HOH . L 6 HOH A 141 338 898 HOH HOH . M 6 HOH B 1 197 503 HOH HOH . M 6 HOH B 2 198 506 HOH HOH . M 6 HOH B 3 199 507 HOH HOH . M 6 HOH B 4 200 508 HOH HOH . M 6 HOH B 5 201 509 HOH HOH . M 6 HOH B 6 202 510 HOH HOH . M 6 HOH B 7 203 513 HOH HOH . M 6 HOH B 8 204 515 HOH HOH . M 6 HOH B 9 205 518 HOH HOH . M 6 HOH B 10 206 522 HOH HOH . M 6 HOH B 11 207 523 HOH HOH . M 6 HOH B 12 208 524 HOH HOH . M 6 HOH B 13 209 525 HOH HOH . M 6 HOH B 14 210 534 HOH HOH . M 6 HOH B 15 211 538 HOH HOH . M 6 HOH B 16 212 541 HOH HOH . M 6 HOH B 17 213 542 HOH HOH . M 6 HOH B 18 214 544 HOH HOH . M 6 HOH B 19 215 546 HOH HOH . M 6 HOH B 20 216 551 HOH HOH . M 6 HOH B 21 217 552 HOH HOH . M 6 HOH B 22 218 555 HOH HOH . M 6 HOH B 23 219 556 HOH HOH . M 6 HOH B 24 220 557 HOH HOH . M 6 HOH B 25 221 564 HOH HOH . M 6 HOH B 26 222 565 HOH HOH . M 6 HOH B 27 223 567 HOH HOH . M 6 HOH B 28 224 569 HOH HOH . M 6 HOH B 29 225 570 HOH HOH . M 6 HOH B 30 226 573 HOH HOH . M 6 HOH B 31 227 575 HOH HOH . M 6 HOH B 32 228 576 HOH HOH . M 6 HOH B 33 229 577 HOH HOH . M 6 HOH B 34 230 580 HOH HOH . M 6 HOH B 35 231 581 HOH HOH . M 6 HOH B 36 232 586 HOH HOH . M 6 HOH B 37 233 594 HOH HOH . M 6 HOH B 38 234 595 HOH HOH . M 6 HOH B 39 235 598 HOH HOH . M 6 HOH B 40 236 599 HOH HOH . M 6 HOH B 41 237 603 HOH HOH . M 6 HOH B 42 238 606 HOH HOH . M 6 HOH B 43 239 610 HOH HOH . M 6 HOH B 44 240 612 HOH HOH . M 6 HOH B 45 241 613 HOH HOH . M 6 HOH B 46 242 614 HOH HOH . M 6 HOH B 47 243 615 HOH HOH . M 6 HOH B 48 244 616 HOH HOH . M 6 HOH B 49 245 617 HOH HOH . M 6 HOH B 50 246 633 HOH HOH . M 6 HOH B 51 247 637 HOH HOH . M 6 HOH B 52 248 638 HOH HOH . M 6 HOH B 53 249 639 HOH HOH . M 6 HOH B 54 250 640 HOH HOH . M 6 HOH B 55 251 641 HOH HOH . M 6 HOH B 56 252 642 HOH HOH . M 6 HOH B 57 253 643 HOH HOH . M 6 HOH B 58 254 645 HOH HOH . M 6 HOH B 59 255 646 HOH HOH . M 6 HOH B 60 256 657 HOH HOH . M 6 HOH B 61 257 660 HOH HOH . M 6 HOH B 62 258 661 HOH HOH . M 6 HOH B 63 259 662 HOH HOH . M 6 HOH B 64 260 675 HOH HOH . M 6 HOH B 65 261 685 HOH HOH . M 6 HOH B 66 262 687 HOH HOH . M 6 HOH B 67 263 688 HOH HOH . M 6 HOH B 68 264 689 HOH HOH . M 6 HOH B 69 265 697 HOH HOH . M 6 HOH B 70 266 698 HOH HOH . M 6 HOH B 71 267 700 HOH HOH . M 6 HOH B 72 268 713 HOH HOH . M 6 HOH B 73 269 721 HOH HOH . M 6 HOH B 74 270 722 HOH HOH . M 6 HOH B 75 271 723 HOH HOH . M 6 HOH B 76 272 727 HOH HOH . M 6 HOH B 77 273 730 HOH HOH . M 6 HOH B 78 274 732 HOH HOH . M 6 HOH B 79 275 733 HOH HOH . M 6 HOH B 80 276 736 HOH HOH . M 6 HOH B 81 277 737 HOH HOH . M 6 HOH B 82 278 738 HOH HOH . M 6 HOH B 83 279 739 HOH HOH . M 6 HOH B 84 280 740 HOH HOH . M 6 HOH B 85 281 743 HOH HOH . M 6 HOH B 86 282 745 HOH HOH . M 6 HOH B 87 283 746 HOH HOH . M 6 HOH B 88 284 747 HOH HOH . M 6 HOH B 89 285 753 HOH HOH . M 6 HOH B 90 286 754 HOH HOH . M 6 HOH B 91 287 755 HOH HOH . M 6 HOH B 92 288 758 HOH HOH . M 6 HOH B 93 289 765 HOH HOH . M 6 HOH B 94 290 775 HOH HOH . M 6 HOH B 95 291 776 HOH HOH . M 6 HOH B 96 292 777 HOH HOH . M 6 HOH B 97 293 778 HOH HOH . M 6 HOH B 98 294 780 HOH HOH . M 6 HOH B 99 295 782 HOH HOH . M 6 HOH B 100 296 783 HOH HOH . M 6 HOH B 101 297 784 HOH HOH . M 6 HOH B 102 298 785 HOH HOH . M 6 HOH B 103 299 786 HOH HOH . M 6 HOH B 104 300 787 HOH HOH . M 6 HOH B 105 301 790 HOH HOH . M 6 HOH B 106 302 792 HOH HOH . M 6 HOH B 107 303 793 HOH HOH . M 6 HOH B 108 304 795 HOH HOH . M 6 HOH B 109 305 796 HOH HOH . M 6 HOH B 110 306 797 HOH HOH . M 6 HOH B 111 307 798 HOH HOH . M 6 HOH B 112 308 800 HOH HOH . M 6 HOH B 113 309 801 HOH HOH . M 6 HOH B 114 310 802 HOH HOH . M 6 HOH B 115 311 803 HOH HOH . M 6 HOH B 116 312 811 HOH HOH . M 6 HOH B 117 313 813 HOH HOH . M 6 HOH B 118 314 814 HOH HOH . M 6 HOH B 119 315 815 HOH HOH . M 6 HOH B 120 316 816 HOH HOH . M 6 HOH B 121 317 817 HOH HOH . M 6 HOH B 122 318 825 HOH HOH . M 6 HOH B 123 319 826 HOH HOH . M 6 HOH B 124 320 828 HOH HOH . M 6 HOH B 125 321 829 HOH HOH . M 6 HOH B 126 322 831 HOH HOH . M 6 HOH B 127 323 836 HOH HOH . M 6 HOH B 128 324 837 HOH HOH . M 6 HOH B 129 325 838 HOH HOH . M 6 HOH B 130 326 839 HOH HOH . M 6 HOH B 131 327 840 HOH HOH . M 6 HOH B 132 328 841 HOH HOH . M 6 HOH B 133 329 846 HOH HOH . M 6 HOH B 134 330 847 HOH HOH . M 6 HOH B 135 331 863 HOH HOH . M 6 HOH B 136 332 864 HOH HOH . M 6 HOH B 137 333 865 HOH HOH . M 6 HOH B 138 334 869 HOH HOH . M 6 HOH B 139 335 871 HOH HOH . M 6 HOH B 140 336 872 HOH HOH . M 6 HOH B 141 337 873 HOH HOH . M 6 HOH B 142 338 874 HOH HOH . M 6 HOH B 143 339 876 HOH HOH . M 6 HOH B 144 340 878 HOH HOH . M 6 HOH B 145 341 882 HOH HOH . M 6 HOH B 146 342 884 HOH HOH . M 6 HOH B 147 343 885 HOH HOH . M 6 HOH B 148 344 892 HOH HOH . M 6 HOH B 149 345 893 HOH HOH . M 6 HOH B 150 346 895 HOH HOH . M 6 HOH B 151 347 899 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 OXY . . . K 5 5.983 4.161 53.526 1 17.55 ? O1 OXY 187 B 1 HETATM 2 O O2 OXY . . . K 5 6.37 3.011 53.266 1 23.34 ? O2 OXY 187 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 2 #