data_2QGD # _model_server_result.job_id C4itPWGy_ftRp_CeX0J1SA _model_server_result.datetime_utc '2024-11-14 15:29:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qgd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":200}' # _entry.id 2QGD # _exptl.entry_id 2QGD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 369.008 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(1,3-BENZOXAZOL-2-YL)-2,6-DIBROMOPHENOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QGD _cell.length_a 42.945 _cell.length_b 85.001 _cell.length_c 65.097 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QGD _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C13 H7 Br2 N O2' _chem_comp.formula_weight 369.008 _chem_comp.id MR5 _chem_comp.mon_nstd_flag . _chem_comp.name 4-(1,3-BENZOXAZOL-2-YL)-2,6-DIBROMOPHENOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-(3,5-DIBROMO-4-HYDROXYPHENYL)BENZOXAZOLE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAH CAL MR5 sing 218 n y CAH CAN MR5 doub 219 n y CAH HAH MR5 sing 220 n n CAL BR1 MR5 sing 221 n n CAL CAO MR5 doub 222 n y CAO OAA MR5 sing 223 n n CAO CAM MR5 sing 224 n y OAA HOAA MR5 sing 225 n n CAM BR2 MR5 sing 226 n n CAM CAI MR5 doub 227 n y CAI CAN MR5 sing 228 n y CAI HAI MR5 sing 229 n n CAN CAP MR5 sing 230 n y CAP OAK MR5 sing 231 n y CAP NAJ MR5 doub 232 n y OAK CAR MR5 sing 233 n y CAR CAQ MR5 doub 234 n y CAR CAG MR5 sing 235 n y CAG CAE MR5 doub 236 n y CAG HAG MR5 sing 237 n n CAE CAD MR5 sing 238 n y CAE HAE MR5 sing 239 n n CAD CAF MR5 doub 240 n y CAD HAD MR5 sing 241 n n CAF CAQ MR5 sing 242 n y CAF HAF MR5 sing 243 n n CAQ NAJ MR5 sing 244 n y # _atom_sites.entry_id 2QGD _atom_sites.fract_transf_matrix[1][1] 0.023286 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011765 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015362 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MR5 A 1 200 200 MR5 MR5 . D 2 MR5 B 1 201 201 MR5 MR5 . E 3 HOH A 1 201 1 HOH HOH . E 3 HOH A 2 202 2 HOH HOH . E 3 HOH A 3 203 3 HOH HOH . E 3 HOH A 4 204 4 HOH HOH . E 3 HOH A 5 205 5 HOH HOH . E 3 HOH A 6 206 9 HOH HOH . E 3 HOH A 7 207 10 HOH HOH . E 3 HOH A 8 208 12 HOH HOH . E 3 HOH A 9 209 16 HOH HOH . E 3 HOH A 10 210 18 HOH HOH . E 3 HOH A 11 211 19 HOH HOH . E 3 HOH A 12 212 21 HOH HOH . E 3 HOH A 13 213 24 HOH HOH . E 3 HOH A 14 214 25 HOH HOH . E 3 HOH A 15 215 26 HOH HOH . E 3 HOH A 16 216 27 HOH HOH . E 3 HOH A 17 217 29 HOH HOH . E 3 HOH A 18 218 32 HOH HOH . E 3 HOH A 19 219 33 HOH HOH . E 3 HOH A 20 220 37 HOH HOH . E 3 HOH A 21 221 40 HOH HOH . E 3 HOH A 22 222 42 HOH HOH . E 3 HOH A 23 223 45 HOH HOH . E 3 HOH A 24 224 46 HOH HOH . E 3 HOH A 25 225 47 HOH HOH . E 3 HOH A 26 226 51 HOH HOH . E 3 HOH A 27 227 52 HOH HOH . E 3 HOH A 28 228 55 HOH HOH . E 3 HOH A 29 229 56 HOH HOH . E 3 HOH A 30 230 57 HOH HOH . E 3 HOH A 31 231 58 HOH HOH . E 3 HOH A 32 232 59 HOH HOH . E 3 HOH A 33 233 61 HOH HOH . E 3 HOH A 34 234 63 HOH HOH . E 3 HOH A 35 235 65 HOH HOH . E 3 HOH A 36 236 66 HOH HOH . E 3 HOH A 37 237 68 HOH HOH . E 3 HOH A 38 238 69 HOH HOH . E 3 HOH A 39 239 70 HOH HOH . E 3 HOH A 40 240 71 HOH HOH . E 3 HOH A 41 241 76 HOH HOH . E 3 HOH A 42 242 78 HOH HOH . E 3 HOH A 43 243 80 HOH HOH . E 3 HOH A 44 244 81 HOH HOH . E 3 HOH A 45 245 82 HOH HOH . E 3 HOH A 46 246 85 HOH HOH . E 3 HOH A 47 247 88 HOH HOH . E 3 HOH A 48 248 90 HOH HOH . E 3 HOH A 49 249 93 HOH HOH . E 3 HOH A 50 250 96 HOH HOH . E 3 HOH A 51 251 97 HOH HOH . E 3 HOH A 52 252 101 HOH HOH . E 3 HOH A 53 253 103 HOH HOH . E 3 HOH A 54 254 105 HOH HOH . E 3 HOH A 55 255 107 HOH HOH . E 3 HOH A 56 256 111 HOH HOH . E 3 HOH A 57 257 114 HOH HOH . E 3 HOH A 58 258 115 HOH HOH . E 3 HOH A 59 259 119 HOH HOH . E 3 HOH A 60 260 122 HOH HOH . E 3 HOH A 61 261 125 HOH HOH . E 3 HOH A 62 262 128 HOH HOH . E 3 HOH A 63 263 137 HOH HOH . E 3 HOH A 64 264 138 HOH HOH . E 3 HOH A 65 265 148 HOH HOH . E 3 HOH A 66 266 152 HOH HOH . E 3 HOH A 67 267 154 HOH HOH . E 3 HOH A 68 268 155 HOH HOH . E 3 HOH A 69 269 156 HOH HOH . E 3 HOH A 70 270 158 HOH HOH . E 3 HOH A 71 271 162 HOH HOH . E 3 HOH A 72 272 165 HOH HOH . F 3 HOH B 1 202 6 HOH HOH . F 3 HOH B 2 203 7 HOH HOH . F 3 HOH B 3 204 8 HOH HOH . F 3 HOH B 4 205 11 HOH HOH . F 3 HOH B 5 206 13 HOH HOH . F 3 HOH B 6 207 14 HOH HOH . F 3 HOH B 7 208 15 HOH HOH . F 3 HOH B 8 209 20 HOH HOH . F 3 HOH B 9 210 22 HOH HOH . F 3 HOH B 10 211 23 HOH HOH . F 3 HOH B 11 212 28 HOH HOH . F 3 HOH B 12 213 30 HOH HOH . F 3 HOH B 13 214 34 HOH HOH . F 3 HOH B 14 215 35 HOH HOH . F 3 HOH B 15 216 36 HOH HOH . F 3 HOH B 16 217 38 HOH HOH . F 3 HOH B 17 218 39 HOH HOH . F 3 HOH B 18 219 43 HOH HOH . F 3 HOH B 19 220 44 HOH HOH . F 3 HOH B 20 221 48 HOH HOH . F 3 HOH B 21 222 49 HOH HOH . F 3 HOH B 22 223 50 HOH HOH . F 3 HOH B 23 224 53 HOH HOH . F 3 HOH B 24 225 54 HOH HOH . F 3 HOH B 25 226 60 HOH HOH . F 3 HOH B 26 227 64 HOH HOH . F 3 HOH B 27 228 67 HOH HOH . F 3 HOH B 28 229 72 HOH HOH . F 3 HOH B 29 230 73 HOH HOH . F 3 HOH B 30 231 74 HOH HOH . F 3 HOH B 31 232 75 HOH HOH . F 3 HOH B 32 233 77 HOH HOH . F 3 HOH B 33 234 79 HOH HOH . F 3 HOH B 34 235 86 HOH HOH . F 3 HOH B 35 236 89 HOH HOH . F 3 HOH B 36 237 91 HOH HOH . F 3 HOH B 37 238 92 HOH HOH . F 3 HOH B 38 239 94 HOH HOH . F 3 HOH B 39 240 95 HOH HOH . F 3 HOH B 40 241 99 HOH HOH . F 3 HOH B 41 242 100 HOH HOH . F 3 HOH B 42 243 102 HOH HOH . F 3 HOH B 43 244 106 HOH HOH . F 3 HOH B 44 245 108 HOH HOH . F 3 HOH B 45 246 109 HOH HOH . F 3 HOH B 46 247 112 HOH HOH . F 3 HOH B 47 248 113 HOH HOH . F 3 HOH B 48 249 116 HOH HOH . F 3 HOH B 49 250 117 HOH HOH . F 3 HOH B 50 251 118 HOH HOH . F 3 HOH B 51 252 120 HOH HOH . F 3 HOH B 52 253 121 HOH HOH . F 3 HOH B 53 254 123 HOH HOH . F 3 HOH B 54 255 127 HOH HOH . F 3 HOH B 55 256 130 HOH HOH . F 3 HOH B 56 257 131 HOH HOH . F 3 HOH B 57 258 133 HOH HOH . F 3 HOH B 58 259 135 HOH HOH . F 3 HOH B 59 260 139 HOH HOH . F 3 HOH B 60 261 140 HOH HOH . F 3 HOH B 61 262 141 HOH HOH . F 3 HOH B 62 263 143 HOH HOH . F 3 HOH B 63 264 145 HOH HOH . F 3 HOH B 64 265 147 HOH HOH . F 3 HOH B 65 266 149 HOH HOH . F 3 HOH B 66 267 150 HOH HOH . F 3 HOH B 67 268 159 HOH HOH . F 3 HOH B 68 269 160 HOH HOH . F 3 HOH B 69 270 161 HOH HOH . F 3 HOH B 70 271 164 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAH MR5 . . . C 2 0.795 -0.842 -4.875 0.5 17.49 ? CAH MR5 200 A 1 HETATM 2 C CAL MR5 . . . C 2 0.717 -0.757 -3.496 0.5 17.32 ? CAL MR5 200 A 1 HETATM 3 BR BR1 MR5 . . . C 2 1.852 -1.865 -2.46 0.5 24.92 ? BR1 MR5 200 A 1 HETATM 4 C CAO MR5 . . . C 2 -0.153 0.141 -2.942 0.5 18.62 ? CAO MR5 200 A 1 HETATM 5 O OAA MR5 . . . C 2 -0.311 0.272 -1.622 0.5 17.31 ? OAA MR5 200 A 1 HETATM 6 C CAM MR5 . . . C 2 -0.971 0.946 -3.755 0.5 19.03 ? CAM MR5 200 A 1 HETATM 7 BR BR2 MR5 . . . C 2 -2.258 2.215 -3.087 0.5 28.93 ? BR2 MR5 200 A 1 HETATM 8 C CAI MR5 . . . C 2 -0.876 0.841 -5.131 0.5 18.5 ? CAI MR5 200 A 1 HETATM 9 C CAN MR5 . . . C 2 0.02 -0.037 -5.701 0.5 18.67 ? CAN MR5 200 A 1 HETATM 10 C CAP MR5 . . . C 2 0.075 -0.16 -7.079 0.5 18.08 ? CAP MR5 200 A 1 HETATM 11 O OAK MR5 . . . C 2 0.529 -1.31 -7.632 0.5 14.63 ? OAK MR5 200 A 1 HETATM 12 C CAR MR5 . . . C 2 0.423 -1.226 -8.981 0.5 16.35 ? CAR MR5 200 A 1 HETATM 13 C CAG MR5 . . . C 2 0.749 -2.101 -10.007 0.5 17.44 ? CAG MR5 200 A 1 HETATM 14 C CAE MR5 . . . C 2 0.576 -1.718 -11.322 0.5 17.37 ? CAE MR5 200 A 1 HETATM 15 C CAD MR5 . . . C 2 0.026 -0.472 -11.581 0.5 16.63 ? CAD MR5 200 A 1 HETATM 16 C CAF MR5 . . . C 2 -0.306 0.412 -10.566 0.5 19.69 ? CAF MR5 200 A 1 HETATM 17 C CAQ MR5 . . . C 2 -0.109 0.04 -9.231 0.5 16.91 ? CAQ MR5 200 A 1 HETATM 18 N NAJ MR5 . . . C 2 -0.339 0.652 -8.049 0.5 17.48 ? NAJ MR5 200 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 18 #