data_2QIR # _model_server_result.job_id xSpCIne0F3pfXKpRsdQzcg _model_server_result.datetime_utc '2024-11-24 08:33:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qir # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":197}' # _entry.id 2QIR # _exptl.entry_id 2QIR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QIR _cell.length_a 57.404 _cell.length_b 57.404 _cell.length_c 145.57 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QIR _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 142 n y N1A C6A COA doub 143 n y C2A N3A COA doub 144 n y C2A H2A COA sing 145 n n N3A C4A COA sing 146 n y C4A C5A COA doub 147 n y C4A N9A COA sing 148 n y C5A C6A COA sing 149 n y C5A N7A COA sing 150 n y C6A N6A COA sing 151 n n N6A H61A COA sing 152 n n N6A H62A COA sing 153 n n N7A C8A COA doub 154 n y C8A N9A COA sing 155 n y C8A H8A COA sing 156 n n N9A C1B COA sing 157 n n C1B C2B COA sing 158 n n C1B O4B COA sing 159 n n C1B H1B COA sing 160 n n C2B O2B COA sing 161 n n C2B C3B COA sing 162 n n C2B H2B COA sing 163 n n O2B HO2A COA sing 164 n n C3B O3B COA sing 165 n n C3B C4B COA sing 166 n n C3B H3B COA sing 167 n n O3B P3B COA sing 168 n n P3B O7A COA doub 169 n n P3B O8A COA sing 170 n n P3B O9A COA sing 171 n n O8A HOA8 COA sing 172 n n O9A HOA9 COA sing 173 n n C4B O4B COA sing 174 n n C4B C5B COA sing 175 n n C4B H4B COA sing 176 n n C5B O5B COA sing 177 n n C5B H51A COA sing 178 n n C5B H52A COA sing 179 n n O5B P1A COA sing 180 n n P1A O1A COA doub 181 n n P1A O2A COA sing 182 n n P1A O3A COA sing 183 n n O2A HOA2 COA sing 184 n n O3A P2A COA sing 185 n n P2A O4A COA doub 186 n n P2A O5A COA sing 187 n n P2A O6A COA sing 188 n n O5A HOA5 COA sing 189 n n O6A CCP COA sing 190 n n CBP CCP COA sing 191 n n CBP CDP COA sing 192 n n CBP CEP COA sing 193 n n CBP CAP COA sing 194 n n CCP H121 COA sing 195 n n CCP H122 COA sing 196 n n CDP H131 COA sing 197 n n CDP H132 COA sing 198 n n CDP H133 COA sing 199 n n CEP H141 COA sing 200 n n CEP H142 COA sing 201 n n CEP H143 COA sing 202 n n CAP OAP COA sing 203 n n CAP C9P COA sing 204 n n CAP H10 COA sing 205 n n OAP HO1 COA sing 206 n n C9P O9P COA doub 207 n n C9P N8P COA sing 208 n n N8P C7P COA sing 209 n n N8P HN8 COA sing 210 n n C7P C6P COA sing 211 n n C7P H71 COA sing 212 n n C7P H72 COA sing 213 n n C6P C5P COA sing 214 n n C6P H61 COA sing 215 n n C6P H62 COA sing 216 n n C5P O5P COA doub 217 n n C5P N4P COA sing 218 n n N4P C3P COA sing 219 n n N4P HN4 COA sing 220 n n C3P C2P COA sing 221 n n C3P H31 COA sing 222 n n C3P H32 COA sing 223 n n C2P S1P COA sing 224 n n C2P H21 COA sing 225 n n C2P H22 COA sing 226 n n S1P HS1 COA sing 227 n n # _atom_sites.entry_id 2QIR _atom_sites.fract_transf_matrix[1][1] 0.01742 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01742 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00687 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 COA A 1 197 1 COA COA . C 3 9CS A 1 501 501 9CS 9CS . D 4 HOH A 1 502 1 HOH HOH . D 4 HOH A 2 503 2 HOH HOH . D 4 HOH A 3 504 3 HOH HOH . D 4 HOH A 4 505 4 HOH HOH . D 4 HOH A 5 506 5 HOH HOH . D 4 HOH A 6 507 7 HOH HOH . D 4 HOH A 7 508 8 HOH HOH . D 4 HOH A 8 509 9 HOH HOH . D 4 HOH A 9 510 10 HOH HOH . D 4 HOH A 10 511 11 HOH HOH . D 4 HOH A 11 512 12 HOH HOH . D 4 HOH A 12 513 13 HOH HOH . D 4 HOH A 13 514 14 HOH HOH . D 4 HOH A 14 515 15 HOH HOH . D 4 HOH A 15 516 16 HOH HOH . D 4 HOH A 16 517 17 HOH HOH . D 4 HOH A 17 518 18 HOH HOH . D 4 HOH A 18 519 19 HOH HOH . D 4 HOH A 19 520 20 HOH HOH . D 4 HOH A 20 521 22 HOH HOH . D 4 HOH A 21 522 23 HOH HOH . D 4 HOH A 22 523 24 HOH HOH . D 4 HOH A 23 524 25 HOH HOH . D 4 HOH A 24 525 26 HOH HOH . D 4 HOH A 25 526 27 HOH HOH . D 4 HOH A 26 527 28 HOH HOH . D 4 HOH A 27 528 29 HOH HOH . D 4 HOH A 28 529 30 HOH HOH . D 4 HOH A 29 530 31 HOH HOH . D 4 HOH A 30 531 32 HOH HOH . D 4 HOH A 31 532 33 HOH HOH . D 4 HOH A 32 533 34 HOH HOH . D 4 HOH A 33 534 36 HOH HOH . D 4 HOH A 34 535 39 HOH HOH . D 4 HOH A 35 536 40 HOH HOH . D 4 HOH A 36 537 41 HOH HOH . D 4 HOH A 37 538 43 HOH HOH . D 4 HOH A 38 539 44 HOH HOH . D 4 HOH A 39 540 46 HOH HOH . D 4 HOH A 40 541 47 HOH HOH . D 4 HOH A 41 542 48 HOH HOH . D 4 HOH A 42 543 49 HOH HOH . D 4 HOH A 43 544 54 HOH HOH . D 4 HOH A 44 545 55 HOH HOH . D 4 HOH A 45 546 56 HOH HOH . D 4 HOH A 46 547 59 HOH HOH . D 4 HOH A 47 548 60 HOH HOH . D 4 HOH A 48 549 61 HOH HOH . D 4 HOH A 49 550 62 HOH HOH . D 4 HOH A 50 551 63 HOH HOH . D 4 HOH A 51 552 64 HOH HOH . D 4 HOH A 52 553 65 HOH HOH . D 4 HOH A 53 554 66 HOH HOH . D 4 HOH A 54 555 68 HOH HOH . D 4 HOH A 55 556 69 HOH HOH . D 4 HOH A 56 557 70 HOH HOH . D 4 HOH A 57 558 71 HOH HOH . D 4 HOH A 58 559 72 HOH HOH . D 4 HOH A 59 560 73 HOH HOH . D 4 HOH A 60 561 74 HOH HOH . D 4 HOH A 61 562 75 HOH HOH . D 4 HOH A 62 563 76 HOH HOH . D 4 HOH A 63 564 77 HOH HOH . D 4 HOH A 64 565 79 HOH HOH . D 4 HOH A 65 566 80 HOH HOH . D 4 HOH A 66 567 82 HOH HOH . D 4 HOH A 67 568 83 HOH HOH . D 4 HOH A 68 569 85 HOH HOH . D 4 HOH A 69 570 87 HOH HOH . D 4 HOH A 70 571 88 HOH HOH . D 4 HOH A 71 572 89 HOH HOH . D 4 HOH A 72 573 92 HOH HOH . D 4 HOH A 73 574 93 HOH HOH . D 4 HOH A 74 575 94 HOH HOH . D 4 HOH A 75 576 95 HOH HOH . D 4 HOH A 76 577 96 HOH HOH . D 4 HOH A 77 578 98 HOH HOH . D 4 HOH A 78 579 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . B 2 2.531 -1.978 -22.337 1 55.2 ? N1A COA 197 A 1 HETATM 2 C C2A COA . . . B 2 2.862 -1.587 -23.621 1 55.09 ? C2A COA 197 A 1 HETATM 3 N N3A COA . . . B 2 2.137 -0.582 -24.241 1 55.02 ? N3A COA 197 A 1 HETATM 4 C C4A COA . . . B 2 1.099 0.032 -23.61 1 54.06 ? C4A COA 197 A 1 HETATM 5 C C5A COA . . . B 2 0.75 -0.344 -22.314 1 54.75 ? C5A COA 197 A 1 HETATM 6 C C6A COA . . . B 2 1.478 -1.362 -21.675 1 55.55 ? C6A COA 197 A 1 HETATM 7 N N6A COA . . . B 2 1.25 -1.679 -20.398 1 55.6 ? N6A COA 197 A 1 HETATM 8 N N7A COA . . . B 2 -0.304 0.422 -21.939 1 54.61 ? N7A COA 197 A 1 HETATM 9 C C8A COA . . . B 2 -0.622 1.259 -22.961 1 54.13 ? C8A COA 197 A 1 HETATM 10 N N9A COA . . . B 2 0.246 1.039 -24.009 1 53.1 ? N9A COA 197 A 1 HETATM 11 C C1B COA . . . B 2 0.481 1.92 -25.185 1 50.85 ? C1B COA 197 A 1 HETATM 12 C C2B COA . . . B 2 -0.79 2.207 -25.974 1 50.46 ? C2B COA 197 A 1 HETATM 13 O O2B COA . . . B 2 -1.07 1.146 -26.859 1 50.81 ? O2B COA 197 A 1 HETATM 14 C C3B COA . . . B 2 -0.498 3.532 -26.676 1 49.2 ? C3B COA 197 A 1 HETATM 15 O O3B COA . . . B 2 0.051 3.391 -27.972 1 50.44 ? O3B COA 197 A 1 HETATM 16 P P3B COA . . . B 2 -0.736 2.958 -29.32 1 51.48 ? P3B COA 197 A 1 HETATM 17 O O7A COA . . . B 2 -1.311 4.18 -30.01 1 50.39 ? O7A COA 197 A 1 HETATM 18 O O8A COA . . . B 2 -1.867 2.003 -28.997 1 51.17 ? O8A COA 197 A 1 HETATM 19 O O9A COA . . . B 2 0.27 2.279 -30.23 1 50.74 ? O9A COA 197 A 1 HETATM 20 C C4B COA . . . B 2 0.604 4.16 -25.828 1 46.8 ? C4B COA 197 A 1 HETATM 21 O O4B COA . . . B 2 1.004 3.199 -24.855 1 48.6 ? O4B COA 197 A 1 HETATM 22 C C5B COA . . . B 2 0.179 5.454 -25.154 1 43.28 ? C5B COA 197 A 1 HETATM 23 O O5B COA . . . B 2 -0.457 6.341 -26.05 1 39.04 ? O5B COA 197 A 1 HETATM 24 P P1A COA . . . B 2 -1.316 7.591 -25.487 1 36.47 ? P1A COA 197 A 1 HETATM 25 O O1A COA . . . B 2 -2.798 7.283 -25.529 1 36.37 ? O1A COA 197 A 1 HETATM 26 O O2A COA . . . B 2 -0.99 8.859 -26.243 1 36.33 ? O2A COA 197 A 1 HETATM 27 O O3A COA . . . B 2 -0.789 7.682 -23.97 1 35.19 ? O3A COA 197 A 1 HETATM 28 P P2A COA . . . B 2 -1.634 8.332 -22.77 1 34.15 ? P2A COA 197 A 1 HETATM 29 O O4A COA . . . B 2 -2.811 9.111 -23.316 1 32.35 ? O4A COA 197 A 1 HETATM 30 O O5A COA . . . B 2 -2.069 7.266 -21.784 1 34.13 ? O5A COA 197 A 1 HETATM 31 O O6A COA . . . B 2 -0.536 9.309 -22.109 1 34.5 ? O6A COA 197 A 1 HETATM 32 C CBP COA . . . B 2 0.85 9.303 -20.104 1 32.83 ? CBP COA 197 A 1 HETATM 33 C CCP COA . . . B 2 0.653 8.797 -21.536 1 33.12 ? CCP COA 197 A 1 HETATM 34 C CDP COA . . . B 2 2.185 8.714 -19.624 1 32.21 ? CDP COA 197 A 1 HETATM 35 C CEP COA . . . B 2 0.961 10.829 -20.137 1 30.41 ? CEP COA 197 A 1 HETATM 36 C CAP COA . . . B 2 -0.352 8.853 -19.231 1 31.27 ? CAP COA 197 A 1 HETATM 37 O OAP COA . . . B 2 -0.706 7.508 -19.484 1 29.79 ? OAP COA 197 A 1 HETATM 38 C C9P COA . . . B 2 -0.228 9.108 -17.745 1 31.7 ? C9P COA 197 A 1 HETATM 39 O O9P COA . . . B 2 -0.465 10.397 -17.24 1 31.23 ? O9P COA 197 A 1 HETATM 40 N N8P COA . . . B 2 0.093 8.088 -16.937 1 32.35 ? N8P COA 197 A 1 HETATM 41 C C7P COA . . . B 2 0.122 8.211 -15.482 1 32.21 ? C7P COA 197 A 1 HETATM 42 C C6P COA . . . B 2 1.369 8.913 -14.923 1 33.38 ? C6P COA 197 A 1 HETATM 43 C C5P COA . . . B 2 2.618 8.687 -15.763 1 34.95 ? C5P COA 197 A 1 HETATM 44 O O5P COA . . . B 2 3.006 7.549 -16.08 1 35.3 ? O5P COA 197 A 1 HETATM 45 N N4P COA . . . B 2 3.294 9.766 -16.141 1 35.95 ? N4P COA 197 A 1 HETATM 46 C C3P COA . . . B 2 4.476 9.641 -16.97 1 37.2 ? C3P COA 197 A 1 HETATM 47 C C2P COA . . . B 2 5.741 9.546 -16.131 1 38.7 ? C2P COA 197 A 1 HETATM 48 S S1P COA . . . B 2 7.201 9.277 -17.177 1 41.39 ? S1P COA 197 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 48 #