data_2QJ5 # _model_server_result.job_id utoX1cXB91UXGiDWxm8tlg _model_server_result.datetime_utc '2025-03-04 07:51:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qj5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":126}' # _entry.id 2QJ5 # _exptl.entry_id 2QJ5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 164.158 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4'-HYDROXYCINNAMIC ACID" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2QJ5 _cell.length_a 40.779 _cell.length_b 40.779 _cell.length_c 117.576 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QJ5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 69 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 69 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C1 _struct_conn.ptnr2_label_comp_id HC4 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HC4 _struct_conn.ptnr2_auth_seq_id 126 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.814 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C9 H8 O3' _chem_comp.formula_weight 164.158 _chem_comp.id HC4 _chem_comp.mon_nstd_flag . _chem_comp.name "4'-HYDROXYCINNAMIC ACID" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'PARA-COUMARIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HC4 doub 129 n n C1 O2 HC4 sing 130 n n C1 C2 HC4 sing 131 n n O2 HO2 HC4 sing 132 n n C2 C3 HC4 doub 133 e n C2 H2 HC4 sing 134 n n C3 C1' HC4 sing 135 n n C3 H3 HC4 sing 136 n n C1' C2' HC4 doub 137 n y C1' C6' HC4 sing 138 n y C2' C3' HC4 sing 139 n y C2' H2' HC4 sing 140 n n C3' C4' HC4 doub 141 n y C3' H3' HC4 sing 142 n n C4' C5' HC4 sing 143 n y C4' O4' HC4 sing 144 n n C5' C6' HC4 doub 145 n y C5' H5' HC4 sing 146 n n C6' H6' HC4 sing 147 n n O4' HO4' HC4 sing 148 n n # _atom_sites.entry_id 2QJ5 _atom_sites.fract_transf_matrix[1][1] 0.024522 _atom_sites.fract_transf_matrix[1][2] 0.014158 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028316 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008505 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HC4 A 1 126 126 HC4 HC4 . C 3 HOH A 1 127 1 HOH HOH . C 3 HOH A 2 128 2 HOH HOH . C 3 HOH A 3 129 3 HOH HOH . C 3 HOH A 4 130 4 HOH HOH . C 3 HOH A 5 131 5 HOH HOH . C 3 HOH A 6 132 6 HOH HOH . C 3 HOH A 7 133 7 HOH HOH . C 3 HOH A 8 134 8 HOH HOH . C 3 HOH A 9 135 9 HOH HOH . C 3 HOH A 10 136 10 HOH HOH . C 3 HOH A 11 137 11 HOH HOH . C 3 HOH A 12 138 12 HOH HOH . C 3 HOH A 13 139 13 HOH HOH . C 3 HOH A 14 140 14 HOH HOH . C 3 HOH A 15 141 15 HOH HOH . C 3 HOH A 16 142 16 HOH HOH . C 3 HOH A 17 143 17 HOH HOH . C 3 HOH A 18 144 18 HOH HOH . C 3 HOH A 19 145 19 HOH HOH . C 3 HOH A 20 146 20 HOH HOH . C 3 HOH A 21 147 21 HOH HOH . C 3 HOH A 22 148 22 HOH HOH . C 3 HOH A 23 149 23 HOH HOH . C 3 HOH A 24 150 24 HOH HOH . C 3 HOH A 25 151 25 HOH HOH . C 3 HOH A 26 152 26 HOH HOH . C 3 HOH A 27 153 27 HOH HOH . C 3 HOH A 28 154 28 HOH HOH . C 3 HOH A 29 155 29 HOH HOH . C 3 HOH A 30 156 30 HOH HOH . C 3 HOH A 31 157 31 HOH HOH . C 3 HOH A 32 158 32 HOH HOH . C 3 HOH A 33 159 33 HOH HOH . C 3 HOH A 34 160 34 HOH HOH . C 3 HOH A 35 161 35 HOH HOH . C 3 HOH A 36 162 36 HOH HOH . C 3 HOH A 37 163 37 HOH HOH . C 3 HOH A 38 164 38 HOH HOH . C 3 HOH A 39 165 39 HOH HOH . C 3 HOH A 40 166 40 HOH HOH . C 3 HOH A 41 167 41 HOH HOH . C 3 HOH A 42 168 42 HOH HOH . C 3 HOH A 43 169 43 HOH HOH . C 3 HOH A 44 170 44 HOH HOH . C 3 HOH A 45 171 45 HOH HOH . C 3 HOH A 46 172 46 HOH HOH . C 3 HOH A 47 173 47 HOH HOH . C 3 HOH A 48 174 48 HOH HOH . C 3 HOH A 49 175 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HC4 . . . B 2 8.198 32.976 7.224 1 8.84 ? C1 HC4 126 A 1 HETATM 2 O O1 HC4 . . . B 2 8.338 33.035 8.429 1 10.85 ? O1 HC4 126 A 1 HETATM 3 C C2 HC4 . . . B 2 7.664 31.934 6.568 1 8.44 ? C2 HC4 126 A 1 HETATM 4 C C3 HC4 . . . B 2 7.316 30.821 7.218 1 9.15 ? C3 HC4 126 A 1 HETATM 5 C C1' HC4 . . . B 2 6.669 29.644 6.605 1 9.04 ? C1' HC4 126 A 1 HETATM 6 C C2' HC4 . . . B 2 6.352 28.573 7.449 1 9.25 ? C2' HC4 126 A 1 HETATM 7 C C3' HC4 . . . B 2 5.726 27.447 6.942 1 8.75 ? C3' HC4 126 A 1 HETATM 8 C C4' HC4 . . . B 2 5.397 27.415 5.592 1 8.38 ? C4' HC4 126 A 1 HETATM 9 C C5' HC4 . . . B 2 5.707 28.477 4.748 1 8.58 ? C5' HC4 126 A 1 HETATM 10 C C6' HC4 . . . B 2 6.327 29.609 5.257 1 8.07 ? C6' HC4 126 A 1 HETATM 11 O O4' HC4 . . . B 2 4.773 26.336 5.062 1 8.61 ? O4' HC4 126 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #