data_2QJC # _model_server_result.job_id okxCSF3kKZbevgS-wbanjQ _model_server_result.datetime_utc '2024-11-30 20:52:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qjc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":400}' # _entry.id 2QJC # _exptl.entry_id 2QJC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QJC _cell.length_a 45.662 _cell.length_b 62.207 _cell.length_c 81.296 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QJC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 137 A VAL 137 1_555 A N MSE 138 A MSE 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C MSE 138 A MSE 138 1_555 A N VAL 139 A VAL 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C THR 160 A THR 160 1_555 A N MSE 161 A MSE 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C MSE 161 A MSE 161 1_555 A N ARG 162 A ARG 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale5 A C SER 192 A SER 192 1_555 A N MSE 193 A MSE 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 A C MSE 193 A MSE 193 1_555 A N TRP 194 A TRP 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? metalc ? metalc1 A OD2 ASP 26 A ASP 26 1_555 B MN MN . A MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc2 A NE2 HIS 28 A HIS 28 1_555 B MN MN . A MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc3 A OD2 ASP 55 A ASP 55 1_555 B MN MN . A MN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc4 A ND2 ASN 81 A ASN 81 1_555 C MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc5 A NE2 HIS 141 A HIS 141 1_555 C MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc6 A ND1 HIS 204 A HIS 204 1_555 C MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc7 B MN MN . A MN 400 1_555 D O4 PO4 . A PO4 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc8 B MN MN . A MN 400 1_555 E O HOH . A HOH 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc9 C MN MN . A MN 401 1_555 D O4 PO4 . A PO4 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2QJC _atom_sites.fract_transf_matrix[1][1] 0.0219 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016075 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012301 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 400 400 MN MN . C 2 MN A 1 401 401 MN MN . D 3 PO4 A 1 500 500 PO4 PO4 . E 4 HOH A 1 501 1 HOH TIP . E 4 HOH A 2 502 2 HOH TIP . E 4 HOH A 3 503 3 HOH TIP . E 4 HOH A 4 504 4 HOH TIP . E 4 HOH A 5 505 5 HOH TIP . E 4 HOH A 6 506 6 HOH TIP . E 4 HOH A 7 507 7 HOH TIP . E 4 HOH A 8 508 8 HOH TIP . E 4 HOH A 9 509 9 HOH TIP . E 4 HOH A 10 510 10 HOH TIP . E 4 HOH A 11 511 11 HOH TIP . E 4 HOH A 12 512 12 HOH TIP . E 4 HOH A 13 513 13 HOH TIP . E 4 HOH A 14 514 14 HOH TIP . E 4 HOH A 15 515 15 HOH TIP . E 4 HOH A 16 516 16 HOH TIP . E 4 HOH A 17 517 17 HOH TIP . E 4 HOH A 18 518 18 HOH TIP . E 4 HOH A 19 519 19 HOH TIP . E 4 HOH A 20 520 20 HOH TIP . E 4 HOH A 21 521 21 HOH TIP . E 4 HOH A 22 522 22 HOH TIP . E 4 HOH A 23 523 23 HOH TIP . E 4 HOH A 24 524 24 HOH TIP . E 4 HOH A 25 525 25 HOH TIP . E 4 HOH A 26 526 26 HOH TIP . E 4 HOH A 27 527 27 HOH TIP . E 4 HOH A 28 528 28 HOH TIP . E 4 HOH A 29 529 29 HOH TIP . E 4 HOH A 30 530 30 HOH TIP . E 4 HOH A 31 531 31 HOH TIP . E 4 HOH A 32 532 32 HOH TIP . E 4 HOH A 33 533 33 HOH TIP . E 4 HOH A 34 534 34 HOH TIP . E 4 HOH A 35 535 35 HOH TIP . E 4 HOH A 36 536 36 HOH TIP . E 4 HOH A 37 537 37 HOH TIP . E 4 HOH A 38 538 38 HOH TIP . E 4 HOH A 39 539 39 HOH TIP . E 4 HOH A 40 540 40 HOH TIP . E 4 HOH A 41 541 41 HOH TIP . E 4 HOH A 42 542 42 HOH TIP . E 4 HOH A 43 543 43 HOH TIP . E 4 HOH A 44 544 44 HOH TIP . E 4 HOH A 45 545 45 HOH TIP . E 4 HOH A 46 546 46 HOH TIP . E 4 HOH A 47 547 47 HOH TIP . E 4 HOH A 48 548 48 HOH TIP . E 4 HOH A 49 549 49 HOH TIP . E 4 HOH A 50 550 50 HOH TIP . E 4 HOH A 51 551 51 HOH TIP . E 4 HOH A 52 552 52 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 8.623 _atom_site.Cartn_y 24.186 _atom_site.Cartn_z 20.58 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.95 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 400 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #