data_2QKR # _model_server_result.job_id f5tCvaBLJex6wlMZwUgpAw _model_server_result.datetime_utc '2024-11-25 10:31:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2qkr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 2QKR # _exptl.entry_id 2QKR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 277.277 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "(Z)-1H,1'H-[2,3']BIINDOLYLIDENE-3,2'-DIONE-3-OXIME" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2QKR _cell.length_a 64.133 _cell.length_b 64.133 _cell.length_c 201.153 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2QKR _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H11 N3 O2' _chem_comp.formula_weight 277.277 _chem_comp.id IXM _chem_comp.mon_nstd_flag . _chem_comp.name "(Z)-1H,1'H-[2,3']BIINDOLYLIDENE-3,2'-DIONE-3-OXIME" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "INDIRUBIN-3'-MONOXIME" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IXM sing 173 n n C1 C3 IXM doub 174 n y C1 C11 IXM sing 175 n y C2 C13 IXM sing 176 n n C2 N24 IXM doub 177 e n C3 N4 IXM sing 178 n n C3 C5 IXM sing 179 n y N4 C13 IXM sing 180 n n N4 HN4 IXM sing 181 n n C5 C7 IXM doub 182 n y C5 HC5 IXM sing 183 n n C7 C9 IXM sing 184 n y C7 HC7 IXM sing 185 n n C9 C11 IXM doub 186 n y C9 HC9 IXM sing 187 n n C11 H11 IXM sing 188 n n C13 C14 IXM doub 189 z n C14 C15 IXM sing 190 n n C14 C18 IXM sing 191 n n C15 N16 IXM sing 192 n n C15 O23 IXM doub 193 n n N16 C17 IXM sing 194 n n N16 H16 IXM sing 195 n n C17 C18 IXM doub 196 n y C17 C19 IXM sing 197 n y C18 C22 IXM sing 198 n y C19 C20 IXM doub 199 n y C19 H19 IXM sing 200 n n C20 C21 IXM sing 201 n y C20 H20 IXM sing 202 n n C21 C22 IXM doub 203 n y C21 H21 IXM sing 204 n n C22 H22 IXM sing 205 n n N24 O39 IXM sing 206 n n O39 H39 IXM sing 207 n n # _atom_sites.entry_id 2QKR _atom_sites.fract_transf_matrix[1][1] 0.015593 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015593 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004971 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IXM A 1 401 401 IXM IXM . C 3 HOH A 1 402 1 HOH HOH . C 3 HOH A 2 403 2 HOH HOH . C 3 HOH A 3 404 3 HOH HOH . C 3 HOH A 4 405 4 HOH HOH . C 3 HOH A 5 406 5 HOH HOH . C 3 HOH A 6 407 6 HOH HOH . C 3 HOH A 7 408 7 HOH HOH . C 3 HOH A 8 409 8 HOH HOH . C 3 HOH A 9 410 9 HOH HOH . C 3 HOH A 10 411 10 HOH HOH . C 3 HOH A 11 412 11 HOH HOH . C 3 HOH A 12 413 12 HOH HOH . C 3 HOH A 13 414 13 HOH HOH . C 3 HOH A 14 415 14 HOH HOH . C 3 HOH A 15 416 15 HOH HOH . C 3 HOH A 16 417 16 HOH HOH . C 3 HOH A 17 418 17 HOH HOH . C 3 HOH A 18 419 18 HOH HOH . C 3 HOH A 19 420 19 HOH HOH . C 3 HOH A 20 421 20 HOH HOH . C 3 HOH A 21 422 21 HOH HOH . C 3 HOH A 22 423 22 HOH HOH . C 3 HOH A 23 424 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IXM . . . B 2 23.243 0.373 15.055 0.8 91.75 ? C1 IXM 401 A 1 HETATM 2 C C2 IXM . . . B 2 22.15 1.154 14.707 0.8 91.62 ? C2 IXM 401 A 1 HETATM 3 C C3 IXM . . . B 2 24.309 1.258 15.189 1 92.15 ? C3 IXM 401 A 1 HETATM 4 N N4 IXM . . . B 2 23.869 2.497 14.934 1 92.07 ? N4 IXM 401 A 1 HETATM 5 C C5 IXM . . . B 2 25.569 0.761 15.541 0.8 91.96 ? C5 IXM 401 A 1 HETATM 6 C C7 IXM . . . B 2 25.755 -0.608 15.754 0.8 91.59 ? C7 IXM 401 A 1 HETATM 7 C C9 IXM . . . B 2 24.682 -1.489 15.621 0.8 91.49 ? C9 IXM 401 A 1 HETATM 8 C C11 IXM . . . B 2 23.425 -0.998 15.271 0.8 91.4 ? C11 IXM 401 A 1 HETATM 9 C C13 IXM . . . B 2 22.564 2.491 14.627 1 91.63 ? C13 IXM 401 A 1 HETATM 10 C C14 IXM . . . B 2 21.812 3.649 14.321 1 91.61 ? C14 IXM 401 A 1 HETATM 11 C C15 IXM . . . B 2 22.395 4.909 14.241 1 91.58 ? C15 IXM 401 A 1 HETATM 12 N N16 IXM . . . B 2 21.475 5.831 13.964 1 91.46 ? N16 IXM 401 A 1 HETATM 13 C C17 IXM . . . B 2 20.286 5.231 13.857 1 91.14 ? C17 IXM 401 A 1 HETATM 14 C C18 IXM . . . B 2 20.445 3.853 14.081 1 91.51 ? C18 IXM 401 A 1 HETATM 15 C C19 IXM . . . B 2 19.023 5.759 13.584 1 91.14 ? C19 IXM 401 A 1 HETATM 16 C C20 IXM . . . B 2 17.904 4.928 13.528 1 91.29 ? C20 IXM 401 A 1 HETATM 17 C C21 IXM . . . B 2 18.047 3.561 13.748 1 91.37 ? C21 IXM 401 A 1 HETATM 18 C C22 IXM . . . B 2 19.312 3.031 14.021 1 91.82 ? C22 IXM 401 A 1 HETATM 19 O O23 IXM . . . B 2 23.593 5.146 14.397 1 91.54 ? O23 IXM 401 A 1 HETATM 20 N N24 IXM . . . B 2 20.936 0.65 14.49 0.8 91.82 ? N24 IXM 401 A 1 HETATM 21 O O39 IXM . . . B 2 20.711 -0.701 14.504 0.8 91.39 ? O39 IXM 401 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 21 #