data_2QL5
#
_model_server_result.job_id            qQc1RFf07CYNbuARjmqRzw 
_model_server_result.datetime_utc      '2024-12-27 01:07:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2ql5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":850}' 
#
_entry.id    2QL5 
#
_exptl.entry_id    2QL5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.124 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CITRIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2QL5 
_cell.length_a            87.255 
_cell.length_b            87.255 
_cell.length_c            187.707 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2QL5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    heptameric 
_pdbx_struct_assembly.oligomeric_count      7 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             H 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 163 A CYS 186 1_555 E C ASJ 5 E ASJ 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.764 ? 
covale ? covale2 C SG CYS 163 C CYS 486 1_555 F C ASJ 5 F ASJ 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? 
covale ? covale3 E C ACE 1 E ACE 701 1_555 E N ASP 2 E ASP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.388 ? 
covale ? covale4 E C GLN 4 E GLN 704 1_555 E N ASJ 5 E ASJ 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale5 F C ACE 1 F ACE 801 1_555 F N ASP 2 F ASP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.309 ? 
covale ? covale6 F C GLN 4 F GLN 804 1_555 F N ASJ 5 F ASJ 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
#
_chem_comp.formula           'C6 H8 O7' 
_chem_comp.formula_weight    192.124 
_chem_comp.id                CIT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CITRIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 CIT doub 92 n n 
C1 O2 CIT sing 93 n n 
C1 C2 CIT sing 94 n n 
O2 HO2 CIT sing 95 n n 
C2 C3 CIT sing 96 n n 
C2 H21 CIT sing 97 n n 
C2 H22 CIT sing 98 n n 
C3 O7 CIT sing 99 n n 
C3 C4 CIT sing 100 n n 
C3 C6 CIT sing 101 n n 
O7 HO7 CIT sing 102 n n 
C4 C5 CIT sing 103 n n 
C4 H41 CIT sing 104 n n 
C4 H42 CIT sing 105 n n 
C5 O3 CIT doub 106 n n 
C5 O4 CIT sing 107 n n 
O4 HO4 CIT sing 108 n n 
C6 O5 CIT doub 109 n n 
C6 O6 CIT sing 110 n n 
O6 HO6 CIT sing 111 n n 
#
_atom_sites.entry_id                     2QL5 
_atom_sites.fract_transf_matrix[1][1]    0.011461 
_atom_sites.fract_transf_matrix[1][2]    0.006617 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013234 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005327 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
H 5 CIT D 1 850 850 CIT CIT . 
I 6 HOH A 1 197 197 HOH HOH . 
I 6 HOH A 2 198 198 HOH HOH . 
I 6 HOH A 3 199 199 HOH HOH . 
I 6 HOH A 4 200 200 HOH HOH . 
I 6 HOH A 5 201 201 HOH HOH . 
I 6 HOH A 6 202 202 HOH HOH . 
I 6 HOH A 7 203 203 HOH HOH . 
I 6 HOH A 8 204 204 HOH HOH . 
I 6 HOH A 9 205 205 HOH HOH . 
I 6 HOH A 10 206 206 HOH HOH . 
I 6 HOH A 11 207 207 HOH HOH . 
I 6 HOH A 12 208 208 HOH HOH . 
I 6 HOH A 13 209 209 HOH HOH . 
I 6 HOH A 14 210 210 HOH HOH . 
I 6 HOH A 15 211 211 HOH HOH . 
I 6 HOH A 16 212 212 HOH HOH . 
I 6 HOH A 17 213 213 HOH HOH . 
I 6 HOH A 18 214 214 HOH HOH . 
I 6 HOH A 19 215 215 HOH HOH . 
I 6 HOH A 20 216 216 HOH HOH . 
I 6 HOH A 21 217 217 HOH HOH . 
I 6 HOH A 22 218 218 HOH HOH . 
I 6 HOH A 23 219 219 HOH HOH . 
I 6 HOH A 24 220 220 HOH HOH . 
I 6 HOH A 25 221 221 HOH HOH . 
I 6 HOH A 26 222 222 HOH HOH . 
I 6 HOH A 27 223 223 HOH HOH . 
I 6 HOH A 28 224 224 HOH HOH . 
I 6 HOH A 29 225 225 HOH HOH . 
I 6 HOH A 30 226 226 HOH HOH . 
I 6 HOH A 31 227 227 HOH HOH . 
I 6 HOH A 32 228 228 HOH HOH . 
I 6 HOH A 33 229 229 HOH HOH . 
J 6 HOH B 1 7 7 HOH HOH . 
J 6 HOH B 2 10 10 HOH HOH . 
J 6 HOH B 3 14 14 HOH HOH . 
J 6 HOH B 4 23 23 HOH HOH . 
J 6 HOH B 5 39 39 HOH HOH . 
J 6 HOH B 6 42 42 HOH HOH . 
J 6 HOH B 7 45 45 HOH HOH . 
J 6 HOH B 8 47 47 HOH HOH . 
J 6 HOH B 9 57 57 HOH HOH . 
J 6 HOH B 10 60 60 HOH HOH . 
J 6 HOH B 11 68 68 HOH HOH . 
J 6 HOH B 12 73 73 HOH HOH . 
J 6 HOH B 13 81 81 HOH HOH . 
J 6 HOH B 14 85 85 HOH HOH . 
J 6 HOH B 15 87 87 HOH HOH . 
J 6 HOH B 16 90 90 HOH HOH . 
J 6 HOH B 17 91 91 HOH HOH . 
J 6 HOH B 18 95 95 HOH HOH . 
J 6 HOH B 19 97 97 HOH HOH . 
J 6 HOH B 20 98 98 HOH HOH . 
J 6 HOH B 21 110 110 HOH HOH . 
J 6 HOH B 22 112 112 HOH HOH . 
J 6 HOH B 23 123 123 HOH HOH . 
K 6 HOH C 1 3 3 HOH HOH . 
K 6 HOH C 2 5 5 HOH HOH . 
K 6 HOH C 3 6 6 HOH HOH . 
K 6 HOH C 4 9 9 HOH HOH . 
K 6 HOH C 5 12 12 HOH HOH . 
K 6 HOH C 6 13 13 HOH HOH . 
K 6 HOH C 7 16 16 HOH HOH . 
K 6 HOH C 8 17 17 HOH HOH . 
K 6 HOH C 9 20 20 HOH HOH . 
K 6 HOH C 10 22 22 HOH HOH . 
K 6 HOH C 11 26 26 HOH HOH . 
K 6 HOH C 12 29 29 HOH HOH . 
K 6 HOH C 13 31 31 HOH HOH . 
K 6 HOH C 14 37 37 HOH HOH . 
K 6 HOH C 15 38 38 HOH HOH . 
K 6 HOH C 16 40 40 HOH HOH . 
K 6 HOH C 17 52 52 HOH HOH . 
K 6 HOH C 18 54 54 HOH HOH . 
K 6 HOH C 19 58 58 HOH HOH . 
K 6 HOH C 20 59 59 HOH HOH . 
K 6 HOH C 21 61 61 HOH HOH . 
K 6 HOH C 22 63 63 HOH HOH . 
K 6 HOH C 23 64 64 HOH HOH . 
K 6 HOH C 24 70 70 HOH HOH . 
K 6 HOH C 25 72 72 HOH HOH . 
K 6 HOH C 26 75 75 HOH HOH . 
K 6 HOH C 27 78 78 HOH HOH . 
K 6 HOH C 28 79 79 HOH HOH . 
K 6 HOH C 29 82 82 HOH HOH . 
K 6 HOH C 30 84 84 HOH HOH . 
K 6 HOH C 31 89 89 HOH HOH . 
K 6 HOH C 32 94 94 HOH HOH . 
K 6 HOH C 33 96 96 HOH HOH . 
K 6 HOH C 34 99 99 HOH HOH . 
K 6 HOH C 35 100 100 HOH HOH . 
K 6 HOH C 36 102 102 HOH HOH . 
K 6 HOH C 37 105 105 HOH HOH . 
K 6 HOH C 38 115 115 HOH HOH . 
K 6 HOH C 39 116 116 HOH HOH . 
K 6 HOH C 40 119 119 HOH HOH . 
K 6 HOH C 41 120 120 HOH HOH . 
K 6 HOH C 42 124 124 HOH HOH . 
K 6 HOH C 43 125 125 HOH HOH . 
L 6 HOH D 1 2 2 HOH HOH . 
L 6 HOH D 2 8 8 HOH HOH . 
L 6 HOH D 3 11 11 HOH HOH . 
L 6 HOH D 4 15 15 HOH HOH . 
L 6 HOH D 5 19 19 HOH HOH . 
L 6 HOH D 6 21 21 HOH HOH . 
L 6 HOH D 7 24 24 HOH HOH . 
L 6 HOH D 8 25 25 HOH HOH . 
L 6 HOH D 9 28 28 HOH HOH . 
L 6 HOH D 10 34 34 HOH HOH . 
L 6 HOH D 11 48 48 HOH HOH . 
L 6 HOH D 12 49 49 HOH HOH . 
L 6 HOH D 13 50 50 HOH HOH . 
L 6 HOH D 14 71 71 HOH HOH . 
L 6 HOH D 15 74 74 HOH HOH . 
L 6 HOH D 16 77 77 HOH HOH . 
L 6 HOH D 17 86 86 HOH HOH . 
L 6 HOH D 18 88 88 HOH HOH . 
L 6 HOH D 19 93 93 HOH HOH . 
L 6 HOH D 20 104 104 HOH HOH . 
L 6 HOH D 21 106 106 HOH HOH . 
L 6 HOH D 22 107 107 HOH HOH . 
L 6 HOH D 23 109 109 HOH HOH . 
M 6 HOH E 1 51 51 HOH HOH . 
N 6 HOH F 1 4 4 HOH HOH . 
N 6 HOH F 2 36 36 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CIT . . . H 5 51.44 -36.917 22.532 1 113.08 ? C1 CIT 850 D 1 
HETATM 2 O O1 CIT . . . H 5 51.519 -38.012 22.071 1 113.31 ? O1 CIT 850 D 1 
HETATM 3 O O2 CIT . . . H 5 52.215 -35.933 21.986 1 112.67 ? O2 CIT 850 D 1 
HETATM 4 C C2 CIT . . . H 5 50.168 -36.504 23.285 1 112.35 ? C2 CIT 850 D 1 
HETATM 5 C C3 CIT . . . H 5 49.953 -37.299 24.624 1 111.95 ? C3 CIT 850 D 1 
HETATM 6 O O7 CIT . . . H 5 51.218 -37.519 25.284 1 112.21 ? O7 CIT 850 D 1 
HETATM 7 C C4 CIT . . . H 5 49.253 -38.653 24.314 1 110.44 ? C4 CIT 850 D 1 
HETATM 8 C C5 CIT . . . H 5 49.372 -39.651 25.44 1 109.41 ? C5 CIT 850 D 1 
HETATM 9 O O3 CIT . . . H 5 48.678 -39.525 26.43 1 108.74 ? O3 CIT 850 D 1 
HETATM 10 O O4 CIT . . . H 5 49.878 -40.851 25.149 1 108.62 ? O4 CIT 850 D 1 
HETATM 11 C C6 CIT . . . H 5 49.038 -36.471 25.539 1 111.99 ? C6 CIT 850 D 1 
HETATM 12 O O5 CIT . . . H 5 49.102 -36.607 26.74 1 112.75 ? O5 CIT 850 D 1 
HETATM 13 O O6 CIT . . . H 5 47.961 -35.854 25.021 1 111.66 ? O6 CIT 850 D 1 
#
_model_server_stats.io_time_ms              89 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           13 
#